Genetic mapping of QTLs controlling horticultural traits in diploid roses

Theoretical and Applied Genetics

Volumn 111, Issue 3, 2005, Pages 511-520

  Dugo, M L ^a   Satovic, Z ^b   Millan T ^c   Cubero, J I ^c   Rubiales, D ^d   Cabrera, A ^c   Torres, A M ^a  

^a Departamento de Mejora y Agronomia   (Spain)

^b UNIVERSITY OF ZAGREB   (Croatia)

^c Escla Tec Sup Ingenieros A   (Spain)

^d INSTITUTO DE AGRICULTURA SOSTENIBLE   (Spain)

Author keywords

Genetic map; Molecular markers; Pseudo testcross; QTLs; Rosa

Indexed keywords

BIOMARKERS; GENES; PLANTS (BOTANY); SATELLITES; SEED;

FLOWER SIZE; GENETIC LINKAGE; GENETIC MAPS; HORTICULTURE;

GENETIC ENGINEERING;

ISOENZYME; MICROSATELLITE DNA; VEGETABLE PROTEIN;

ARTICLE; CHROMOSOME MAP; DIPLOIDY; GENETIC LINKAGE; GENETIC MARKER; GENETICS; PHENOTYPE; QUANTITATIVE TRAIT LOCUS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; ROSE;

CHROMOSOME MAPPING; DIPLOIDY; GENETIC MARKERS; ISOENZYMES; LINKAGE (GENETICS); MICROSATELLITE REPEATS; PHENOTYPE; PLANT PROTEINS; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; QUANTITATIVE TRAIT LOCI; ROSA;

GENES; GENETIC ENGINEERING; PLANTS; SATELLITES; SEEDLINGS;

ERYSIPHALES; ROSA; ROSA WICHURANA;

EID: 23944478648     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-005-2042-4     Document Type: Article

References (43)

1. Aranzana MJ, Pineda A, Cosson E, Dirlewanger E, Ascasibar J, Cipriani G, Ryder CD, Testolin R, Abbott A, King GJ, Iezzoni A, Arús P (2003) A set of simple-sequence repeat (SSR) markers covering the Prunus genome. Theor Appl Genet 106:819-825
2. Atienza SG, Satovic Z, Petersen KK, Dolstra O, Martín A (2002) Preliminary genetic linkage map of Miscanthus sinensis with RAPD markers. Theor Appl Genet 105:946-952
3. Cardy BJ, Stuber CW, Goodman MM (1980) Techniques for starch-gel electrophoresis of enzymes from maize (Zea mays L.). Mimeo Series, North Carolina State University Department of Statistics, Raleigh
4. Chase K, Adler FR, Lark KG (1997) Epistat: A computer program for identifying and testing interactions between pairs of quantitative trait loci. Theor Appl Genet 94:724-730
5. Cheng FS, Brown SK, Weeden NF (1997) A DNA extraction protocol from various tissues in woody species. Hortscience 32:921-922
6. Churchill GA, Doerge RW (1994) Empirical threshold values for quantitative trait mapping. Genetics 138:963-971
7. Clayton JW, Tretiak DN (1972) Amino-citrate buffers for pH control in starch-gel electrophoresis. J Fish Res Bd Can 29:1169-1172
8. Crespel L, Chirollet M, Durel CE, Zhang D, Meynet J, Gudin S (2002) Mapping of qualitative and quantitative phenotypic traits in Rosa using AFLP markers. Theor Appl Genet 105:1207-1214
9. Debener T (1999) Genetic analysis of horticulturally important morphological and physiological characters in diploid roses. Gartenbauwissenschaft 64:14-20
10. Debener T, Mattiesch L (1999) Construction of a genetic linkage map for roses using RAPD and AFLP markers. Theor Appl Genet 99:891-899
11. Debener T, Bartels C, Mattiesch L (1996) RAPD analysis of genetic variation between a group of rose cultivars and selected wild rose species. Mol Breed 2:321-327
12. Debener T, Janakiram T, Mattiesch L (2000) Sports and seedlings of rose varieties analysed with molecular markers. Plant Breed 119:71-74
13. Debener T, von Malek B, Mattiesch L, Kaufmann H (2001) Genetic and molecular analysis of important characters in roses. Acta Hort 547:45-49
14. De Vries DP, Dubois LAM (1978) On the transmission of the yellow flower colour from Rosa foetida to recurrent flowering hybrid tea-roses. Euphytica 27:205-210
15. 2 hybrid Tea x R. centifolia muscosa (Aiton) Seringe populations. Gartenbauwissenschaft 49:97-100
16. Esselink GD, Smulders MJM, Vosman B (2003) Identification of cut rose (Rosa hybrida) and rootstock varieties using sequence tagged microsatellite site markers. Theor Appl Genet 106:227-286
17. Gottlieb LD (1973) Enzyme differentiation and phylogeny in Clarkia franciscana, C. rubicundaand C. amoena. Evolution 27:205-214
18. Grattapaglia D, Sederoff R (1994) Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross mapping strategy and RAPD markers. Genetics 137:1121-1137
19. Gudin S (2000) Rose: genetics and breeding. Plant Breed Rev 17:159-189
20. Guilford P, Prakash S, Zhu JM, Gardiner S, Basset H, Forster R (1997) Microsatellites in Malus x domestica (apple): abundance polymorphisms and cultivar identification. Theor Appl Genet 94:249-254
21. Jansen RC, Stam P (1994) High resolution of quantitative traits into multiple loci via interval mapping. Genetics 136:1447-1455
22. 2 progeny. Theor Appl Genet 97:1034-1041
23. Kianian SF, Quiros CF (1992) Generation of a Brassica oleracea composite RFLP map: Linkage arrangements among various populations and evolutionary implications. Theor Appl Genet 84:544-554
24. Knott SA, Neale DB, Sewell MH, Haley CS (1997) Multiple marker mapping of quantitative trait loci in an outbred pedigree of loblolly pine. Theor Appl Genet 94:810-820
25. Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121:185-199
26. Lark KG, Chase K, Adler F, Mansur LM, Orf JH (1995) Interactions between quantitative trait loci in soybean in which trait variation at one locus is conditional upon a specific allele at another. Proc Natl Acad Sci USA 92:4656-4660
27. Lewis WH, Basye RE (1961) Analysis of nine crosses between diploid Rosa species. Proc Am Soc Hort Sci 78:572-579
28. Linde M, Debener T (2003) Isolation and identification of eight races of powdery mildew of roses (Podosphaera pannosa) (Wallr:Fr) de Bary and the genetic analysis of the resistance gene Rpp1. Theor Appl Genet 107:256-262
29. Malek VB, Debener T (2000) Identification of molecular markers linked to Rdr1, a gene conferring resistance to blackspot in roses. Theor Appl Genet 101:977-983
30. Michelmore RW, Paran I, Kesseli RV (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88:9828-9832
31. Pozárková D, Koblízková A, Román B, Torres AM, Lucretti S, Lysák M, Dolezel J, Macas J (2002) Development and characterization of microsatellite markers from chromosome 1-specific DNA libraries of Vicia faba. Biologia Plantarum 45:337-345
32. Rajapakse S, Byrne DH, Zhang L, Anderson N, Arumuganathan K, Ballard RE (2001) Two genetic linkage maps of tetraploid roses. Theor Appl Genet 103:575-583
33. Selander RK, Smith MH, Yang SY, Johnson WE, Gentry JB (1971) Biochemical polymorphism and systematics in the genus Peromyscus. I. Variation in the old-field mouse (Peromyscus polionotus). Univ Texas Publ 7103:49-90
34. Sosinski B, Gannavarapu M, Hager LD, Beck LE, King GJ, Ryder CD, Rajapakse S, Baird WV, Ballard RE, Abbott AG (2000) Characterization of microsatellite markers in peach [ Prunus persica (L.) Batsch]. Theor Appl Genet 101:421-428
35. Stam P (1993) Construction of integrated genetic linkage maps by means of a new computer package: JoinMap. Plant J 3:739-744
36. Torres AM, Weeden NF, Martin A (1993) Linkage among isozyme, RFLP and RADP markers in Vicia faba. Theor Appl Genet 85:937-945
37. Van Ooijen JW (1992) Accuracy of mapping quantitative trait loci in autogamous species. Theor Appl Genet 84:803-811
38. Van Ooijen JW, Maliepaard C (1996) MapQTL, Version 3.0: software for the calculation of QTL positions on genetic maps. CPRO-DLO, Wageningen The Netherlands
39. Van Ooijen JW, Voorrips VE (2001) JoinMap 3.0, Software for the calculation of genetic linkage maps. Plant Research International, Wageningen, The Netherlands
40. Voorrips RE (2002) MapChart: Software for the graphical presentation of linkage maps and QTLs. J Hered 93:77-78
41. Weeden NF, Emmo AC (1985) Isozyme characterization of Kentucky bluegrass cultivars. Can J Plant Sci 65:985-994
42. Wendel JF, Weeden NF (1990) Visualization and interpretation of plant isozymes. In: Isozymes in plant biology Dioscorides Press, Portland, Oregon, pp 5-45
43. Yin T, Huang M, Wang M, Zhu L-H, Zeng Z-B, Wu R (2001) Preliminary interespecific genetic maps of the Populus genomes constructed from RAPD markers. Genome 44:602-609