A set of simple-sequence repeat (SSR) markers covering the Prunus genome

Theoretical and Applied Genetics

Volumn 106, Issue 5, 2003, Pages 819-825

  Aranzana, M J ^a   Pineda, A ^a   Cosson, P ^b   Dirlewanger, E ^b   Ascasibar, J ^c   Cipriani, G ^d   Ryder, C D ^e   Testolin, R ^d   Abbott, A ^f   King, G J ^e   Iezzoni, A F ^g   Arus P ^a  

^a IRTA   (Spain)

^b CEMAGREF   (France)

^c UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

^d UNIVERSITY OF UDINE   (Italy)

^e UNIVERSITY OF WARWICK   (United Kingdom)

^f CLEMSON UNIVERSITY   (United States)

^g MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

Genotyping set; Map comparison; Marker assisted selection; Microsatellites; Reference map

Indexed keywords

AMPLIFICATION; APPROXIMATION THEORY; MAPS;

MICROSATELLITE PRIMER PAIRS;

GENES;

EMBRYOPHYTA; PRUNUS; PRUNUS DULCIS; PRUNUS PERSICA;

EID: 0038515332     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-002-1094-y     Document Type: Article

References (27)

1. Aranzana MJ, Garcia-Mas J, Carbó J, Arús P (2002) Development and variability of microsatellite markers in peach. Plant Breed 121:87-92
2. Ballester J, Socias i Company R, Arús P, de Vicente MC (2001) Genetic mapping of a major gene delaying blooming time in almond. Plant Breed 120:268-270
3. Bernatzky R, Tanksley SD (1986) Toward a saturated linkage map in tomato based on isozymes and random cDNA sequences. Genetics 112:887-898
4. Byrne DH (1990) Isozyme variability in four diploid stone fruits compared with other woody perennial plants. J Hered 81:68-71
5. Cantini C, Iezzoni AF, Lamboy WF, Bortizki M, Struss D (2001) DNA fingerprinting of tetraploid cherry germplasm using simple sequence repeats. J Am Soc Hortic Sci 126:205-209
6. Cipriani G, Lot G, Huang WG, Marrazzo MT, Peterlunger E, Testolin R (1999) AC/GT and AG/CT microsatellite repeats in peach (Prunus persica (L.) Batsch): isolation, characterisation and cross-species amplification in Prunus. Theor Appl Genet 99:65-72
7. Cregan PB, Mudge J, Fickus EW, Marek LF, Danesh D, Denny R, Matthews BF, Jarvik T, Young ND (1999a) Targeted isolation of simple sequence repeat markers through the use of bacterial artificial chromosomes. Theor Appl Genet 98:919-928
8. Cregan PB, Jarvik T, Bush AL, Shoemaker RC, Lark KG, Kahler AL, Kaya N, VanToai TT, Lohnes DG, Chung J, Specht JE (1999b) An integrated genetic linkage map of the soybean genome. Crop Sci 39:1464-1490
9. Dettori MT, Quarta R, Verde I (2001) A peach linkage map integrating RFLPs, SSRs, RAPDs and morphological markers. Genome 44:783-790
10. Dirlewanger E, Pascal T, Zuger C, Kervella J (1997) Analysis of molecular markers associated with powdery mildew resistance genes in peach (Prunus persica (L.) Batch) x Prunus davidiana. Theor Appl Genet 93:909-919
11. Dirlewanger E, Pronier V, Parvery R, Rothan C, Guye A, Monet R (1998) Genetic linkage map of peach [Prunus persica (L.) Batsch] using morphological and molecular markers. Theor Appl Genet 97:888-895
12. Dirlewanger E, Cosson P, Tavaud M, Aranzana MJ, Poizat C, Zanetto A, Arús P, Laigret F (2002) Development of microsatellite markers in peach [Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry. Theor Appl Genet (in press)
13. Downey SL, Iezzoni AF (2000) Polymorphic DNA markers in black cherry (Prunus serotina) are identified using sequences from sweet cherry, peach, and sour cherry. J Am Soc Hortic Sci 125:76-80
14. Graziano E, Arús P (2002) FITMAPS and SHOWMAP: Two programs for graphical comparison and plotting of genetic maps. J Hered 93:225-227
15. Hormaza JI (2002) Molecular characterization and similarity relationships among apricot (Prunus armeniaca L.) genotypes using simple sequence repeats. Theor Appl Genet 104:321-328
16. Jáuregui B, de Vicente MC, Messeguer R, Felipe A, Bonnet A, Salesses G, Arús P (2001) A reciprocal translocation between 'Garfi' almond and 'Nemared' peach. Theor Appl Genet 102:1169-1176
17. 2 progeny. Theor Appl Genet 97:1034-1041
18. Joobeur T, Periam N, de Vicente MC, King GJ, Arús P (2000) Development of a second generation linkage map for almond using RAPD and SSR markers. Genome 43:649-655
19. Kloosterman AD, Budowle B, Daselaar P (1993) PCR-amplification and detection of the human DIS80 VNTR locus. Amplification conditions, population genetics and application in forensic analysis. Int J Leg Med 105:257-264
20. Lander E, Green P, Abrahamson J, Barlow A, Daley M, Lincoln S, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181
21. Macaulay M, Ramsay L, Powell W, Waugh R (2001) A representative, highly informative 'genotyping set' of barley SSRs. Theor Appl Genet 102:801-809
22. Rae SJ, Aldam C, Domínguez I, Hoebrechts M, Barnes SR, Edwards KJ (2000) Development and incorporation of microsatellite markers into the linkage map of sugarbeet (Beta vulgaris spp.). Theor Appl Genet 100:1240-1248
23. Röder MS, Korzun V, Wendelhake K, Plaschke J, Tix M-H, Leroy P, Ganal M (1998) A microsatellite map of wheat. Genetics 149:2007-2023
24. Sosinski B, Gannavarapu M, Hager LD, Beck LE, King GJ, Ryder CD, Rajapakse S, Baird WV, Ballard RE, Abbott AG (2000) Characterization of microsatellite markers in peach [Prunus persica (L.) Batsch]. Theor Appl Genet 101:421-428
25. Temnykh S, Park WD, Ayres N, Cartinhour S, Hauck N, Lipovich L, Cho YG, Ishii T, McCouch SR (2000) Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.). Theor Appl Genet 100:697-712
26. Testolin R, Marrazzo T, Cipriani G, Quarta R, Verde I, Dettori MT, Pancaldi M, Sansavini S (2000) Microsatellite DNA in peach [Prunus persica (L.) Batsch] and its use in fingerprinting and testing the genetic origin of cultivars. Genome 43:512-520
27. Viruel MA, Messeguer R, de Vicente MC, García-Mas J, Puigdomènech P, Vargas F, Arús P (1995) A linkage map with RFLP and isozyme markers for almond. Theor Appl Genet 91:964-971