Plasma proteome database as a resource for proteomics research

Proteomics

Volumn 5, Issue 13, 2005, Pages 3531-3536

  Muthusamy, Babylakshmi ^a   Hanumanthu, G ^a   Suresh, Shubha ^a   Rekha, B ^a   Srinivas, D ^a   Karthick, L ^a   Vrushabendra, B M ^a   Sharma, Salil ^a   Mishra, Goparani ^a   Chatterjee, Pritam ^a   Mangala, K S ^a   Shivashankar, H N ^a   Chandrika, K N ^a   Deshpande, Nandan ^a   Suresh, M ^a   Kannabiran, N ^a   Niranjan, Vidya ^a   Nalli, Anuradha ^a   Prasad, T S Keshava ^a   Arun, K S ^a   Reddy, Raghunath ^a   Chandran, Sreenath ^a   Jadhav, Trafina ^a   Julie, D ^a   Mahesh, M ^a   John, S Lynate ^a   Palvankar, Kshitish ^a   Sudhir, D ^a   Bala, P ^a   Rashmi, N S ^a   Vishnupriya, G ^a   Dhar, Kaushik ^a   Reshma, S ^a   Chaerkady, Raghothama ^a   Gandhi, T K B ^a   Harsha, H C ^a   Mohan, S Sujatha ^a   Deshpande, Krishna S ^a   Sarker, Malabika ^a   Pandey, Akhilesh ^b   more..

^a Institute of Bioinformatics   (India)

^b JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Annotation; HUPO; Mass spectrometry; Plasma proteome project; Subproteomes; Systems biology

Indexed keywords

GENE PRODUCT; ISOPROTEIN; PROTEOME;

AMINO ACID SEQUENCE; ARTICLE; BODY FLUID; DATA BASE; PLASMA; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN LOCALIZATION; PROTEOMICS; SINGLE NUCLEOTIDE POLYMORPHISM;

AMINO ACID MOTIFS; BLOOD PROTEINS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; GENOME, HUMAN; HUMANS; MASS SPECTROMETRY; PEPTIDES; POLYMORPHISM, SINGLE NUCLEOTIDE; PROTEIN ISOFORMS; PROTEIN STRUCTURE, TERTIARY; PROTEOMICS; TIME FACTORS;

EID: 23944466410     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/pmic.200401335     Document Type: Article

References (24)

1. Anderson, N. L., Anderson, N. G., Mol. Cell. Proteomics 2002, 1, 845-867.
2. Anderson, L., Anderson, N. G., Proc. Natl. Acad. Sci. USA 1977, 74, 5421-5425.
3. Hughes, G. J., Frutiger, S., Paquet, N., Ravier, F. et al., Electrophoresis 1992, 13, 707-714.
4. Adkins, J. N., Varnum, S. M., Auberry, K. J., Moore, R. J. et al., Mol. Cell. Proteomics 2002, 1, 947-952.
5. Tirumalai, R. S., Chan, K. C., Prieto, D. A., Issaq, H. J. et al., Mol. Cell. Proteomics 2003, 2, 1096-1103.
6. Pieper, R., Gatlin, C. L., Makusky, A. J., Russo, P. S. et al., Proteomics 2003, 3, 1345-1364.
7. Shen, Y., Jacobs, J. M., Camp, D. G., Fang, R. et al., Anal. Chem. 2004, 76, 1134-1144.
8. Zhou, M., Lucas, D. A., Chan, K. C., Issaq, H. J. et al., Electrophoresis 2004, 25, 1289-1298.
9. Chan, K. C., Lucas, D. A., Hise, D., Schaefer, C. F. et al., Clin. Proteomics 2004, 1, 101-225.
10. Rose, K., Bougueleret, L., Baussant, T., Bohm, G. et al., Proteomics 2004, 4, 2125-2150.
11. Hanash, S., J. Proteome Res. 2004, 3, 197-199.
12. Omenn, G. S., Proteomics 2004, 4, 1235-1240.
13. Peri, S., Navarro, J. D., Amanchy, R., Kristiansen, T. Z. et al., Genome Res. 2003, 13, 2363-2371.
14. Navarro, J. D., Niranjan, V., Peri, S., Jonnalagadda, C. K. et al., Trends Biotechnol. 2003, 21, 263-268.
15. Kersey, P. J., Duarte, J., Williams, A., Karavidopoulou, Y. et al., Proteomics 2004, 4, 1985-1988.
16. Hamosh, A., Scott, A. F., Amberger, J. S., Bocchini, C. A. et al., Nucleic Acids Res. 2005, 33, D514-517.
17. Maglott, D., Ostell, J., Pruitt, K. D., Tatusova, T., Nucleic Acids Res. 2005, 33, D54-58.
18. Wain, H. M., Lush, M. J., Ducluzeau, F., Khodiyar, V. K. et al., Nucleic Acids Res. 2004, 32, D255-257.
19. Omenn, G. S., States, D. J., Adamski, M., Blackwell, T. W. et al., Proteomics 2005, 5, this issue.
20. Benson, D. A., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J. et al., Nucleic Acids Res. 2005, 33, D34-38.
21. Sherry, S. T., Ward, M., Sirotkin, K., Genome Res. 1999, 9, 677-679.
22. Schultz, J., Milpetz, F., Bork, P., Ponting, C. P., Proc. Natl. Acad. Sci. USA 1998, 95, 5857-5864.
23. Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D. et al., Nat. Genet. 2000, 25, 25-29.
24. Ping, P., Vondriska, T. M., Creighton, C. J., Gandhi, T. K. B. et al., Proteomics 2005, 5, this issue.