메뉴 건너뛰기




Volumn 143, Issue 2, 2005, Pages 173-182

Estimating SNP proportions in populations of malaria parasites by sequencing: Validation and applications

Author keywords

Alleles; DNA sequencing; Malaria; Plasmodium chabaudi; Polymorphism; Single nucleotide polymorphism (SNP)

Indexed keywords

NUCLEOTIDE;

EID: 23944463121     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molbiopara.2005.05.014     Document Type: Article
Times cited : (23)

References (18)
  • 1
    • 0015716547 scopus 로고
    • Enzyme variation in Plasmodium falciparum in the Gambia
    • R. Carter, and I.A. McGregor Enzyme variation in Plasmodium falciparum in the Gambia Trans R Soc Trop Med Hyg 67 1973 830 837
    • (1973) Trans R Soc Trop Med Hyg , vol.67 , pp. 830-837
    • Carter, R.1    McGregor, I.A.2
  • 3
    • 0017903637 scopus 로고
    • Persistence of drug-resistant malaria parasites
    • V.E. Rosario, D. Walliker, R. Hall, and G.H. Beale Persistence of drug-resistant malaria parasites Lancet 1 1978 185 187
    • (1978) Lancet , vol.1 , pp. 185-187
    • Rosario, V.E.1    Walliker, D.2    Hall, R.3    Beale, G.H.4
  • 4
    • 0023277005 scopus 로고
    • Genetic analysis of the human malaria parasite Plasmodium falciparum
    • D. Walliker, I. Quakyi, and T.E. Wellems Genetic analysis of the human malaria parasite Plasmodium falciparum Science 236 1987 1661 1666
    • (1987) Science , vol.236 , pp. 1661-1666
    • Walliker, D.1    Quakyi, I.2    Wellems, T.E.3
  • 5
    • 0026352991 scopus 로고
    • Conserved and variant epitopes of target antigens of transmission- blocking antibodies among isolates of Plasmodium falciparum from Malaysia
    • A. Foo, R. Carter, and C. Lambros Conserved and variant epitopes of target antigens of transmission-blocking antibodies among isolates of Plasmodium falciparum from Malaysia Am J Trop Med Hyg 44 1991 623 631
    • (1991) Am J Trop Med Hyg , vol.44 , pp. 623-631
    • Foo, A.1    Carter, R.2    Lambros, C.3
  • 6
    • 0344849413 scopus 로고    scopus 로고
    • Intragenic recombinants of Plasmodium falciparum identified by in situ polymerase chain reaction
    • L. Ranford-Cartwright, and D. Walliker Intragenic recombinants of Plasmodium falciparum identified by in situ polymerase chain reaction Mol Biochem Parasitol 102 1999 13 20
    • (1999) Mol Biochem Parasitol , vol.102 , pp. 13-20
    • Ranford-Cartwright, L.1    Walliker, D.2
  • 7
    • 0141763736 scopus 로고    scopus 로고
    • Real-time quantitative PCR for analysis of genetically mixed infections of malaria parasites: Technique validation and applications
    • S.J. Cheesman, J.C. de Roode, A.F. Read, and R. Carter Real-time quantitative PCR for analysis of genetically mixed infections of malaria parasites: technique validation and applications Mol Biochem Parasitol 131 2003 83 91
    • (2003) Mol Biochem Parasitol , vol.131 , pp. 83-91
    • Cheesman, S.J.1    De Roode, J.C.2    Read, A.F.3    Carter, R.4
  • 8
    • 0037189924 scopus 로고    scopus 로고
    • Numerous, robust genetic markers for Plasmodium chabaudi by the method of amplified fragment length polymorphism
    • K. Grech, A. Martinelli, S. Pathirana, D. Walliker, P. Hunt, and R. Carter Numerous, robust genetic markers for Plasmodium chabaudi by the method of amplified fragment length polymorphism Mol Biochem Parasitol 123 2002 95 104
    • (2002) Mol Biochem Parasitol , vol.123 , pp. 95-104
    • Grech, K.1    Martinelli, A.2    Pathirana, S.3    Walliker, D.4    Hunt, P.5    Carter, R.6
  • 9
    • 2942566220 scopus 로고    scopus 로고
    • Amplified fragment length polymorphism measures proportions of malaria parasites carrying specific alleles in complex genetic mixtures
    • A. Martinelli, P. Hunt, S. Cheesman, and R. Carter Amplified fragment length polymorphism measures proportions of malaria parasites carrying specific alleles in complex genetic mixtures Mol Biochem Parasitol 136 2004 117 122
    • (2004) Mol Biochem Parasitol , vol.136 , pp. 117-122
    • Martinelli, A.1    Hunt, P.2    Cheesman, S.3    Carter, R.4
  • 10
    • 0031933950 scopus 로고    scopus 로고
    • Development and comparison of quantitative assays for the dihydropteroate synthetase codon 540 mutation associated with sulfadoxine resistance in Plasmodium falciparum
    • M.F. Shaio, P. Wang, C.S. Lee, P.F.G. Sims, and J.E. Hyde Development and comparison of quantitative assays for the dihydropteroate synthetase codon 540 mutation associated with sulfadoxine resistance in Plasmodium falciparum Parasitology 116 1998 203 210
    • (1998) Parasitology , vol.116 , pp. 203-210
    • Shaio, M.F.1    Wang, P.2    Lee, C.S.3    Sims, P.F.G.4    Hyde, J.E.5
  • 12
    • 0036590014 scopus 로고    scopus 로고
    • Estimation of SNP allele frequency in DNA pools by using pyrosequencing
    • J.D. Gruber, P.B. Colligan, and J.K. Wolford Estimation of SNP allele frequency in DNA pools by using pyrosequencing Hum Genet 110 2002 395 401
    • (2002) Hum Genet , vol.110 , pp. 395-401
    • Gruber, J.D.1    Colligan, P.B.2    Wolford, J.K.3
  • 13
    • 2942558867 scopus 로고    scopus 로고
    • Development of a multiplex PCR-ligase detection reaction assay for diagnosis of infection by the four parasite species causing malaria in humans
    • D.T. McNamara, J.M. Thomson, L.J. Kasehagen, and P.A. Zimmerman Development of a multiplex PCR-ligase detection reaction assay for diagnosis of infection by the four parasite species causing malaria in humans J Clin Micro 42 2004 2403 2410
    • (2004) J Clin Micro , vol.42 , pp. 2403-2410
    • McNamara, D.T.1    Thomson, J.M.2    Kasehagen, L.J.3    Zimmerman, P.A.4
  • 14
    • 19344362685 scopus 로고    scopus 로고
    • Fitness of drug resistant malaria parasites
    • D. Walliker, P. Hunt, and H. Babiker Fitness of drug resistant malaria parasites Acta Tropica 94 2005 251 259
    • (2005) Acta Tropica , vol.94 , pp. 251-259
    • Walliker, D.1    Hunt, P.2    Babiker, H.3
  • 15
    • 12744273367 scopus 로고    scopus 로고
    • Linkage group selection: Rapid gene discovery in malaria parasites
    • R. Culleton, A. Martinelli, P. Hunt, and R. Carter Linkage group selection: rapid gene discovery in malaria parasites Genome Res 15 2005 92 97
    • (2005) Genome Res , vol.15 , pp. 92-97
    • Culleton, R.1    Martinelli, A.2    Hunt, P.3    Carter, R.4
  • 16
    • 14144249148 scopus 로고    scopus 로고
    • A genetic approach to the de novo identification of targets of strain-specific immunity in malaria parasites
    • A. Martinelli, S. Cheesman, and P. Hunt A genetic approach to the de novo identification of targets of strain-specific immunity in malaria parasites Proc Natl Acad Sci USA 102 2005 814 819
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 814-819
    • Martinelli, A.1    Cheesman, S.2    Hunt, P.3
  • 18
    • 0028243789 scopus 로고
    • The dihydrofolate reductase domain of rodent malarias: Point mutations and pyrimethamine resistance
    • Q. Cheng, and A. Saul The dihydrofolate reductase domain of rodent malarias: point mutations and pyrimethamine resistance Mol Biochem Parasitol 65 1994 361 363
    • (1994) Mol Biochem Parasitol , vol.65 , pp. 361-363
    • Cheng, Q.1    Saul, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.