Structure determination of GGA-GAE and γ1-ear in complex with peptides: Crystallization of low-affinity complexes in membrane traffic

Acta Crystallographica Section D: Biological Crystallography

Volumn 61, Issue 6, 2005, Pages 731-736

  Yamada, Yusuke ^a,b   Inoue, Michio ^a,b   Shiba, Tomoo ^a   Kawasaki, Masato ^a   Kato, Ryuichi ^a,b   Nakayama, Kazuhisa ^c   Wakatsuki, Soichi ^a,b  

^a HIGH ENERGY ACCELERATOR RESEARCH ORGANIZATION KEK   (Japan)

^b GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

^c KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE DIPHOSPHATE RIBOSYLATION FACTOR; GGA ADAPTOR PROTEINS; PEPTIDE; TRANSCRIPTION FACTOR AP 1; VESICULAR TRANSPORT ADAPTOR PROTEIN;

ANIMAL; ARTICLE; CHEMISTRY; HUMAN; PROTEIN QUATERNARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

ADAPTOR PROTEINS, VESICULAR TRANSPORT; ADP-RIBOSYLATION FACTORS; ANIMALS; CRYSTALLOGRAPHY, X-RAY; HUMANS; PEPTIDES; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; TRANSCRIPTION FACTOR AP-1;

EID: 23844518098     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444905009595     Document Type: Conference Paper

References (25)

1. Bai, H., Doray, B. & Kornfeld, S. (2004). J. Biol Chem. 279, 17411-17417.
2. Beckwith, J. (2000). Methods Enzymol. 326, 3-7.
3. Boehm, M. & Bonifacino, J. S. (2001). Mol. Biol. Cell, 12, 2907-2920.
4. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
5. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
6. Collins, B. M., Praefcke, G. J. K., Robinson, M. S. & Owen, D. J. (2003). Nature Struct. Biol. 10, 599-606.
7. Doray, B., Ghosh, P., Griffith, J., Geuze, H. J. & Kornfeld, S. (2002). Science, 297, 1700-1703.
8. Fenn, T. D., Ringe, D. & Petsko, G. A. (2003). J. Appl. Cryst. 36, 944-947.
9. Jones, T. A., Zou, J.-Y., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
10. Kent, H. M., McMahon, H. T., Evans, P. R., Benmerah, A. & Owen, D. J. (2002). Structure, 10, 1139-1148.
11. Kraulis, P. J. (1991). J. Appl. Cryst. 24, 946-950.
12. Lee, B. & Richards, F. M. (1971). J. Mol. Biol. 55, 379-400.
13. Mattera, R., Ritter, B., Sidhu, S. S., McPherson, P. S. & Bonifacino, J. S. (2004). J. Biol. Chem. 279, 8018-8028.
14. Matthews, B. W. (1968). J. Mol. Biol. 33, 491-497.
15. Merritt, E. A. & Murphy, M. E. P. (1994). Acta Cryst. D50, 869-873.
16. Miller, G. J., Mattera, R., Bonifacino, J. S. & Hurley, J. H. (2003). Nature Struct. Biol. 10, 607-613.
17. Murshudov, G. N., Vagin, A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
18. Nicholls, A., Sharp, K. & Honing, B. (1991). Proteins Struct. Funct. Genet. 11, 281-296.
19. Nogi, T., Shiba, Y., Kawasaki, M., Shiba, T., Matsugaki, N., Igarashi, N., Suzuki, M., Kato, R., Takatsu, H., Nakayama, K. & Wakatsuki, S. (2002). Nature Struct. Biol. 9, 527-531.
20. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
21. Page, L. J., Sowerby, P. J., Lui, W. W. & Robinson, M. S. (1999). J. Cell. Biol. 146, 993-1004.
22. Pellegrini, L., Yu, D. S., Lo, T., Anand, S., Lee, M., Blundell, T. L. & Venkitaraman, A. R. (2002). Nature (London), 420, 287-293.
23. Roussel, A. & Cambillau, C. (1991). Silicon Graphics Geometry Partners Directory. Mountain View, CA, USA: Silicon Graphics.
24. Vagin, A. & Teplyakov, A. (1997). J. Appl. Cryst. 30, 1022-1025.
25. Volkman, B. F., Prehoda, K. E., Scott, J. A., Peterson, F. C. & Lim, W. A. (2002). Cell, 111, 565-576.