New proteins in a materials world

Current Opinion in Biotechnology

Volumn 16, Issue 4, 2005, Pages 416-421

  Sanford, Karl ^a   Kumar, Manoj ^a  

^a GENENCOR INTERNATIONAL INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIATOMS; PROTEIN ENGINEERING; PROTEIN EXPRESSION; SYNTHETIC POLYMERS;

AMINO ACIDS; BIOMATERIALS; BIOTECHNOLOGY; COMPOSITE MATERIALS; GENETIC ENGINEERING; MONOMERS; NANOTECHNOLOGY; POLYMERS;

PROTEINS;

NANOPARTICLE;

AMINO ACID ANALYSIS; GENETIC ENGINEERING; HALOBACTERIUM SALINARUM; NANOTECHNOLOGY; POLYMERIZATION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN ENGINEERING; PROTEIN EXPRESSION; PROTEIN SYNTHESIS; REVIEW; SYNTHESIS;

BIOMIMETIC MATERIALS; PROTEIN ENGINEERING;

BACILLARIOPHYTA;

EID: 23444446374     PISSN: 09581669     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.copbio.2005.06.002     Document Type: Review

References (47)

1. D.L. Woerdeman, W.S. Veraverbeke, R.S. Parnas, D. Johnson, J.A. Delcour, I. Verpoest, and C.J.G. Plummer Designing new materials from wheat protein Biomacromolecules 5 2004 1262 1269
2. J. Yang, I. Gitlin, V.M. Krishnamurthy, J.A. Vazquez, C.E. Costello, and G.M. Whitesides Synthesis of monodisperse polymers from proteins J Am Chem Soc 125 2003 12392 12393 An elegant example of the chemical derivatization of proteins and the synthesis of monodisperse polymers.
3. th ACS National Meeting, NY, US, September, 7-11; 2003.
4. G.E. Wnek, M.E. Carr, D.G. Simpson, and G.L. Bowlin Electrospinning of nanofiber fibrinogen structures Nano Lett 3 2003 213 216
5. M.L. Flenniken, D.A. Willits, S. Brumfield, M.J. Young, and T. Douglas The small heat shock protein cage from Methanococcus jannaschii is a versatile nanoscale platform for genetic and chemical modification Nano Lett 3 2003 1573 1576
6. A.R. McMillan, C.D. Paavola, J. Howard, S.L. Chan, N.J. Zaluzec, and J.D. Trent Conformation ordered nanoparticle arrays formed on engineered chaperonin protein templates Nat Mater 1 2002 247 252
7. C. Schaffer, and P. Messner Surface-layer glycoproteins: an example for the diversity of bacterial glycosylation with promising impacts on nanobiotechnology Glycobiology 14 2004 31R 42R
8. C. Vollenkle, S. Weigert, N. Ilk, E. Egelseer, V. Weber, F. Loth, D. Falkenhagen, U.B. Sleytr, and M. Sara Construction of a functional S-layer fusion protein comprising an immunoglobulin G-binding domain for development of specific adsorbents for extracorporeal blood purification Appl Environ Microbiol 70 2004 1514 1521
9. M. Bergkvist, S.S. Mark, X. Yang, E.R. Angert, and C.A. Batt Bionanofabrication of ordered nanoparticle arrays: effect of particle properties and adsorption conditions J Phys Chem 108 2004 8241 8248
10. M. Niederwies, and S.H. Bossmann Encyclopedia of Nanoscience and Nanotechnology 7 2004 851 867
11. N.B. Gillespie, K.J. Wise, R. Lei, J.A. Stuart, D.L. Marcy, J. Hillebrecht, Q. Li, L. Ramos, K. Jordan, S. Fyvie, and R.R. Birge Characterization of the branched-photocycle intermediates P and Q of bacteriorhodopsin J Phys Chem 106 2002 13352 13361
12. D. Ho, B. Chu, H. Lee, and C.D. Montemagno Protein-driven energy transduction across polymeric biomembranes Nanotechnology 15 2004 1084 1094
13. J.C. Venter, K. Remington, J.F. Heidelberg, A.L. Halpern, D. Rusch, J.A. Eisen, D. Wu, I. Paulsen, K.E. Nelson, and W. Nelson Environmental genome shotgun sequencing of the Sargasso Sea Science 304 2004 66 74
14. R. Langer, and D.A. Tirell Designing materials for biology and medicine Nature 428 2004 487 492 In this seminal article, the authors review the impact of biomaterials in the success of medical devices and drug delivery systems. They provide their views on new challenges and directions in biomaterials research and discuss how protein-based materials are key to the quest.
15. M.P. Lutolf, and J.A. Hubbell Synthetic biomaterials as instructive extracellular microenvironments for morphogenesis in tissue engineering Nat Biotechnol 23 2005 47 55
16. Collier CD, Kumar M, Cuevas WA: Repeat sequence protein polymer, active agent conjugates, methods and uses. US Patent Application Publication No. US 2004/0234609A1. The authors use a platform approach starting form gene synthesis to fermentation to create biomaterials that have diverse applications ranging from healthcare biomaterials, biodefense and personal care needs.
17. T.C. Holmes Novel peptide-based biomaterial scaffolds for tissue engineering Trends Biotechnol 20 2002 16 21
18. H. Betre, L.A. Setton, D.E. Meyer, and A. Chilkoti Characterization of a genetically engineered elastin-like polypeptide for cartilaginous tissue repair Biomacromolecules 3 2002 910 916
19. A. Chilkoti, M.R. Dreher, and D.E. Meyer Design of thermally responsive, recombinant polypeptide carriers for targeted drug delivery Adv Drug Deliv Rev 54 2002 1093 1111
20. E.G. Bellomo, M.D. Wyrsta, L. Pakstis, D.J. Pochan, and T.J. Deming Stimuli-responsive polypeptide vesicles by conformation-specific assembly Nat Mater 3 2004 244 248
21. Stupp SI, Hartgernik JD, Beniash E: Self-assembly of peptide-amphiphile nanofibers under physiological conditions. US Patent Application Publication No. US 2004/00018939A1. Describes the production of nanomaterials built from a simple family of self-assembling molecules. These materials mimic extracellular matrices and might offer hope for treating serious injuries, they can also be used in regenerative medicine.
22. G.A. Silva, C. Czeisler, K.L. Niece, E. Beniash, D.A. Harrington, J.A. Kessler, and S.I. Stupp Selective differentiation of neural progenitor cells by high-epitope density nanofibers Science 303 2004 1352 1355
23. R.L. Satcher, K. Doverkin, A.S. Levenson, T. Vandenbroek, and S.I. Stupp Gene expression in cancer cells is influenced by contact with bone cells in a novel coculture system that models bone metastasis Clin Orthop 426 2004 54 63
24. X. Kong, and S.A. Jenekhe Block copolymers containing conjugated polymer and polypeptide sequences: synthesis and self-assembly of electroactive and photoactive nanostructures Macromolecules 37 2004 8180 8183
25. M.P. Lutolf, G.P. Raeber, A.H. Zirsch, N. Tirelli, and J.A. Hubbell Cell-responsive synthetic hydrogels Adv Mater 15 2003 888 892
26. Kumar M, Cuevas WA: Use of repeat sequence protein polymers in personal care compositions. US Patent Application Publication No. US 2004/0180027A1.
27. Kumar M, Mazeaud I, Christiano SP: Controlled release of active agents utilizing repeat sequence protein polymers. US Patent Application Publication No. US 2004/0228913A1.
28. E.V. Armbrust, J.A. Berges, C. Bowler, B.R. Green, D. Martinez, N.H. Putnam, S. Zhou, A.E. Allen, K.E. Apt, and M. Bechner The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism Science 306 2004 79 86 Presents the genome sequence of a diatom and provides the connection between gene sequence and templated silica nanostructures.
29. C.H. Po Foo, J. Huang, and D.L. Kaplan Lessons from seashells: silica mineralization via protein templating Trends Biotechnol 22 2004 577 585 The authors provide an in-depth review of protein templating for silica-based nanostructures.
30. Adamson DH, Dabbs DM, Aksay IA, Morse DE: Non-peptide, silicatein inspired silica condensation catalyst. Abstracts of Papers, 227th ACS National Meeting, Anaheim and CA; 2004, 90:239-240.
31. T. Coradin, and P.J. Lopez Biogenic silica patterning: simple chemistry or subtle biology? ChemBioChem 4 2003 251 259
32. R.R. Unocic, F.M. Zalar, P.M. Sarosi, Y. Cai, and K.H. Sandhage Anatase assemblies from algae: coupling biological self-assembly of 3-D nanoparticle structures with synthetic reaction chemistry Chem Commun (Camb) 7 2004 796 797
33. C.S. Gaddis, and K.H. Sandhage Freestanding microscale 3-D polymeric structures with biologically derived shapes and nanoscale features J Mater Res 19 2004 2541 2545 Describes the synthesis of freestanding polymeric structures that retain the microshell shapes and fine features resident in the silica-based frustule of diatoms. The authors demonstrate how the materials science platform can be expanded using naturally occurring structures as the template.
34. R.R. Naik, S.J. Stringer, G. Agarwal, S.E. Jones, and M.O. Stone Biomimetic synthesis and patterning of silver nanoparticles Nat Mater 1 2002 169 172
35. C. Mao, D.F. Solis, B.D. Reiss, S.T. Kottmann, R.Y. Sweeney, A. Hayhurst, G. Georgiou, B. Iverson, and A. Belcher Virus-based toolkit for the directed synthesis of magnetic and semiconducting nanowires Science 303 2004 213 217 The authors demonstrate the use of a virus-based scaffold for the synthesis of several inorganic single crystals and chemically ordered nanowires. A synthetic process is established for growing and organizing nanowires from semiconducting and magnetic materials and the article offers many references on related research.
36. I.A. Banerjee, L. Yu, and H. Matsui Cu nanocrystal growth on peptide nanotubes by biomineralization: size control of Cu nanocrystals by tuning peptide conformation Proc Natl Acad Sci USA 100 2003 14678 14682
37. R.R. Naik, S.E. Jones, C.J. Murray, J.C. McAuliffe, R.A. Vaia, and M.O. Stone Peptide templates for nanoparticle synthesis derived from polymerase chain reaction-driven phage display Adv Funct Mater 14 2004 25 30 The authors demonstrate an advanced method for use in phage display technology for discovering peptide sequences that provide unique functionality.
38. S. Zhang Emerging biological materials through molecular self-assembly Biotechnol Adv 20 2002 321 339 Molecular biomaterials can be assembled using either a top-down or a bottom-up approach; however, it is the bottom-up approach that will become the corner stone for biofabrication of nanomaterials manufacture.
39. H. Gao, B. Ji, I.L. Jager, E. Arzt, and P. Fratzl Materials become insensitive to flaws at nanoscale: lesson from Nature Proc Natl Acad Sci USA 100 2003 5597 5600
40. A.M. Smith, S.F. Acquah, N. Bone, H.W. Kroto, M.G. Ryadnov, M.S. Stevens, D.R. Walton, and D.N. Woolfson Polar assembly in a designed protein fiber Angew Chem Int Ed Engl 44 2004 325 328
41. M. Ryadnov, and D.N. Woolfson Engineering the morphology of a self-assembling protein fiber Nat Mater 2 2003 329 332 The authors illustrate with peptide examples how biological assemblies can provide directions for the development of new protein-based materials.
42. S. Matsumura, S. Uemura, and H. Mihara Fabrication of nanofibers with uniform morphology by self-assembly of designed peptides Chemistry (Easton) 10 2004 2789 2794
43. A. Aggeli, M. Bell, L.M. Carrick, C.W.G. Fishwich, R. Harding, P.J. Mawer, S.E. Radford, A.E. Strong, and N. Boden pH as a trigger of peptide β-sheet self-assembly and reversible switching between nematic and isotropic phases J Am Chem Soc 125 2003 9619 9628
44. T.O. Yeates, and J.E. Padilla Designing supramolecular protein assemblies Curr Opin Struct Biol 12 2002 464 470
45. R.A. Macmillan, C.D. Paavola, J. Howard, S.A. Chan, N.J. Zaluzec, and J.D. Trent Ordered nanoparticle arrays formed on engineered chaperonin protein templates Nat Mater 1 2002 247 252
46. T.-J.M. Luo, R. Soong, E. Lan, B. Dunn, and C. Montemagno Photo-induced proton gradients and ATP biosynthesis produced by vesicles encapsulated in a silica matrix Nat Materials 4 2005 220 224
47. J.D. Brennan Using light to drive biosynthesis Nat Materials 4 2005 189 190