Mitochondrial nucleoid and transcription factor A

Annals of the New York Academy of Sciences

Volumn 1011, Issue , 2004, Pages 61-68

  Kanki, Tomotake ^a   Nakayama, Hiroshi ^b   Sasaki, Narie ^c   Takio, Koji ^b   Alam, Tanfis Istiaq ^a   Hamasaki, Naotaka ^a   Kang, Dongchon ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b RIKEN   (Japan)

^c OCHANOMIZU UNIVERSITY   (Japan)

Author keywords

HMG; Mitochondria; Mitochondrial DNA; Nucleoid; TFAM; Transcription

Indexed keywords

HIGH MOBILITY GROUP PROTEIN; MITOCHONDRIAL DNA; MITOCHONDRIAL TRANSCRIPTION FACTOR A; NAKED DNA; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR ABF2; UNCLASSIFIED DRUG;

CELL FUNCTION; COMPLEX FORMATION; CONFERENCE PAPER; DNA PROTEIN COMPLEX; HUMAN; MITOCHONDRION; NONHUMAN; PROTEIN ANALYSIS; PROTEIN FUNCTION;

EID: 2342654180     PISSN: 00778923     EISSN: None     Source Type: Book Series    
DOI: 10.1196/annals.1293.007     Document Type: Conference Paper

References (35)

1. KANG, D. & N. HAMASAKI. 2002. Maintenance of mitochondrial DNA integrity: repair and degradation. Curr. Genet. 41: 311-322.
2. FISHER, R.P. & D.A. CLAYTON. 1988. Purification and characterization of human mitochondrial transcription factor 1. Mol. Cell. Biol. 8: 3496-3509.
3. PARISI, M.A. et al. 1993. A human mitochondrial transcription activator can functionally replace a yeast mitochondrial HMG-box protein both in vivo and in vitro. Mol. Cell. Biol. 13: 1951-1961.
4. FALKENBERG, M. et al. 2002. Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA. Nat. Genet. 31: 289-294.
5. SHADEL, G.S. & D.A. CLAYTON. 1997. Mitochondrial DNA maintenance in vertebrates. Annu. Rev. Biochem. 66: 409-435.
6. LARSSON, N.G. et al. 1998. Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice. Nat. Genet. 18: 231-236.
7. BUSTIN, M. 1999. Regulation of DNA-dependent activities by the functional motifs of the high-mobility-group chromosomal proteins. Mol. Cell. Biol. 19: 5237-5246.
8. WOLFFE, A.P. 1994. Architectural transcription factors. Science 264: 1100-1103.
9. WOLFFE, A.P. 1999. Architectural regulations and HMG1. Nat. Genet. 22: 215-217.
10. DIFFLEY, J.F.X. & B. STILLMAN. 1992. DNA binding properties of an HMG1-related protein from yeast mitochondria. J. Biol. Chem. 267: 3368-3374.
11. DIFFLEY, J.F.X. & B. STILLMAN. 1991. A close relative of the nuclear, chromosomal high-mobility group protein HMG1 in yeast mitochondria. Proc. Natl. Acad. Sci. USA 88: 7864-7868.
12. MEGRAW, T.L. & C.B. CHAE. 1993. Functional complementarity between the HMG-like yeast mitochondrial histone HM and bacterial histone-like protein HU. J. Biol. Chem. 268: 12758-12763.
13. MIYAKAWA, I. et al. 1987. Isolation of morphologically intact mitochondrial nucleoids from the yeast, Saccharomyces cerevisiae. J. Cell Sci. 88: 431-439.
14. SASAKI, N. et al. 1998. DNA synthesis in isolated mitochondrial nucleoids from plasmodia of Physarum polycephalum. Protoplasma 203: 221-231.
15. SATOH, M. & T. KUROIWA. 1991. Organization of multiple nucleoids and DNA molecules in mitochondria of a human cell. Exp. Cell Res. 196: 137-140.
16. SPELBRINK, J.N. et al. 2001 Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria. Nat. Genet. 28: 223-231.
17. GARRIDO, N. et al. 2003. Composition and dynamics of human mitochondrial nucleoids. Mol. Biol. Cell. 14: 1583-1596.
18. ALAM, T.I. et al. 2003. Human mitochondrial DNA is packaged with TFAM. Nucleic Acids Res. 31: 1640-1645.
19. TAKAMATSU, C. et al. 2002. Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein. EMBO Rep. 3: 451-456.
20. CLAYTON, D.A. 1991. Replication and transcription of vertebrate mitochondrial DNA. Annu. Rev. Cell Biol. 7: 453-478.
21. FISHER, R.P. et al. 1991. A rapid, efficient method for purifying DNA-binding proteins. J. Biol. Chem. 266: 9153-9160.
22. OHNO, T. et al. 2000. Binding of human mitochondrial transcription factor A, an HMG box protein, to a four-way DNA junction. Biochem. Biophys. Res. Commun. 271: 492-498.
23. WILLIAMS, R.S. 1986. Mitochondrial gene expression in mammalian striated muscle. J. Biol. Chem. 261: 12390-12394.
24. GOTO, A. et al. 2001. Drosophila mitochondrial transcription factor A (d-TFAM) is dispensable for the transcription of mitochondrial DNA in Kc167 cells. Biochem. J. 354: 243-248.
25. NAM, S.C. & C. KANG. 2001. Expression of cloned cDNA for the human mitochondrial RNA polymerase in Escherichia coli and purification. Protein Expr. Purif. 21: 485-491.
26. PRIETO-MARTIN, A. et al. 2001 A study on the human mitochondrial RNA polymerase activity points to existence of a transcription factor B-like protein. FEBS Lett. 503: 51-55.
27. MCCULOCH, V. et al. 2002. A human mitochondrial transcription factor is related to RNA adenine methyltransferases and binds S-adenosylmethionine. Mol. Cell. Biol. 22: 1116-1125.
28. JACKSON, D.A. et al. 1996. Sequences attaching loops of nuclear and mitochondrial DNA to underlying structures in human cells: the role of transcription units. Nucleic Acids Res. 24: 1212-1219.
29. GETZENBERG, R.H. et al. 1991. Nuclear structure and the three-dimensional organization of DNA. J. Cell. Biochem. 47: 289-299.
30. BROWN, D.A. & J.K. ROSE. 1992 Sorting of GPI-anchored proteins to glycolipid-enriched membrane subdomains during transport to the apical cell surface. Cell 68: 533-544.
31. YAFFE, M.P. 1999. The machinery of mitochondrial inheritance and behavior. Science 283: 1493-1497.
32. CARRE, M. et al. 2002. Tubulin is an inherent component of mitochondrial membranes that interacts with the voltage-dependent anion channel J. Biol. Chem. 277: 33664-33669.
33. TOLSTONOG, G.V. et al. 2001. Isolation of SDS-stable complexes of the intermediate filament protein vimentin with repetitive, mobile, nuclear matrix attachment region, and mitochondrial DNA sequence elements from cultured mouse and human fibroblasts. DNA Cell Biol. 20: 531-554.
34. HERRMANN, H. & U. AEBI. 2000. Intermediate filaments and their associates: multi-talented structural elements specifying cytoarchitecture and cytodynamics. Curr. Opin. Cell. Biol. 12: 79-90.
35. KUBOTA, T. et al. 1997. Cardiac-specific overexpression of tumor necrosis factor-alpha causes lethal myocarditis in transgenic mice. J. Card. Fail. 3: 117-124.