-
1
-
-
0037716574
-
Evolutionary insights from studies on virus of hyperthermophilic archae
-
D. Prangishvili Evolutionary insights from studies on virus of hyperthermophilic archae Res. Microbiol. 154 2003 289 294
-
(2003)
Res. Microbiol.
, vol.154
, pp. 289-294
-
-
Prangishvili, D.1
-
2
-
-
0038392706
-
Bacteriophage observations and evolution
-
H.W. Ackermann Bacteriophage observations and evolution Res. Microbiol. 154 2003 245 251
-
(2003)
Res. Microbiol.
, vol.154
, pp. 245-251
-
-
Ackermann, H.W.1
-
4
-
-
0037022213
-
DNA packaging: A new class of molecular motors
-
S.D. Moore, and P.E. Prevelige DNA packaging: a new class of molecular motors Curr. Biol. 12 2002 R96 R98
-
(2002)
Curr. Biol.
, vol.12
-
-
Moore, S.D.1
Prevelige, P.E.2
-
5
-
-
0032582665
-
Assembly of a tailed bacterial virus and its genome release studied in three dimensions
-
Y. Tao, N.H. Olson, W. Xu, D.L. Anderson, M.G. Rossmann, and T.S. Baker Assembly of a tailed bacterial virus and its genome release studied in three dimensions Cell 95 1998 431 437
-
(1998)
Cell
, vol.95
, pp. 431-437
-
-
Tao, Y.1
Olson, N.H.2
Xu, W.3
Anderson, D.L.4
Rossmann, M.G.5
Baker, T.S.6
-
6
-
-
0032712359
-
Adding the third dimension to virus life cycles: 3D reconstruction of icosahedral viruses from cryo-electron micrographs
-
T.S. Baker, N.H. Olson, and S.D. Fuller Adding the third dimension to virus life cycles: 3D reconstruction of icosahedral viruses from cryo-electron micrographs Microbiol. Mol. Biol. Rev. 63 1999 862 922
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 862-922
-
-
Baker, T.S.1
Olson, N.H.2
Fuller, S.D.3
-
7
-
-
0034695668
-
Maturation dynamics of a viral capsid: Visualization of transitional intermediate states
-
R. Lata, J.F. Conway, N. Cheng, R.L. Duda, R.W. Hendrix, W.R. Wikoff, J.E. Johnson, H. Tsurata, and A.C. Steven Maturation dynamics of a viral capsid: visualization of transitional intermediate states Cell 100 2000 253 263
-
(2000)
Cell
, vol.100
, pp. 253-263
-
-
Lata, R.1
Conway, J.F.2
Cheng, N.3
Duda, R.L.4
Hendrix, R.W.5
Wikoff, W.R.6
Johnson, J.E.7
Tsurata, H.8
Steven, A.C.9
-
8
-
-
0035957688
-
Virus maturation involving large subunit rotations and local refolding
-
J.F. Conway, W.R. Wikoff, N. Cheng, R.L. Duda, R.W. Hendrix, J.E. Johnson, and A.C. Steven Virus maturation involving large subunit rotations and local refolding Science 292 2001 744 748
-
(2001)
Science
, vol.292
, pp. 744-748
-
-
Conway, J.F.1
Wikoff, W.R.2
Cheng, N.3
Duda, R.L.4
Hendrix, R.W.5
Johnson, J.E.6
Steven, A.C.7
-
9
-
-
2942572925
-
Control of crosslinking by quaternary structure changes during bacteriophage HK97 maturation
-
L. Gan, J. Conway, B. Firek, N. Cheng, R. Hendrix, A. Steven, J. Johnson, and R. Duda Control of crosslinking by quaternary structure changes during bacteriophage HK97 maturation Mol. Cell 14 2004 559 569
-
(2004)
Mol. Cell
, vol.14
, pp. 559-569
-
-
Gan, L.1
Conway, J.2
Firek, B.3
Cheng, N.4
Hendrix, R.5
Steven, A.6
Johnson, J.7
Duda, R.8
-
10
-
-
33544472834
-
-
Y. Zivanovic, P. Boulanger, F. Confalonieri, M. Dutertre, P. Decottignies, G. Del Castillo, Genbank (2004).
-
(2004)
Genbank
-
-
Zivanovic, Y.1
Boulanger, P.2
Confalonieri, F.3
Dutertre, M.4
Decottignies, P.5
Del Castillo, G.6
-
11
-
-
0015579461
-
Structural proteins of bacteriophage T5
-
M. Zweig, and D. Cummings Structural proteins of bacteriophage T5 Virology 51 1973 443 453
-
(1973)
Virology
, vol.51
, pp. 443-453
-
-
Zweig, M.1
Cummings, D.2
-
12
-
-
0015851092
-
Cleavage of head and tail proteins during bacteriophage T5 assembly: Selective host involvement in the cleavage of a tail protein
-
M. Zweig, and D. Cummings Cleavage of head and tail proteins during bacteriophage T5 assembly: selective host involvement in the cleavage of a tail protein J. Mol. Biol. 80 1973 505 518
-
(1973)
J. Mol. Biol.
, vol.80
, pp. 505-518
-
-
Zweig, M.1
Cummings, D.2
-
13
-
-
0024452966
-
DNA packaging in dsDNA bacteriophages
-
L.W. Black DNA packaging in dsDNA bacteriophages Annu. Rev. Microbiol. 43 1989 267 292
-
(1989)
Annu. Rev. Microbiol.
, vol.43
, pp. 267-292
-
-
Black, L.W.1
-
14
-
-
1942533523
-
Molecular architecture of the prolate head of bacteriophage T4
-
A. Fokine, P.R. Chipman, P.G. Leiman, V.V. Mesyanzhinov, V.B. Rao, and M.G. Rossmann Molecular architecture of the prolate head of bacteriophage T4 Proc. Natl. Acad. Sci. U. S. A. 101 2004 6003 6008
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 6003-6008
-
-
Fokine, A.1
Chipman, P.R.2
Leiman, P.G.3
Mesyanzhinov, V.V.4
Rao, V.B.5
Rossmann, M.G.6
-
15
-
-
0345306753
-
3D structure of herpes simplex virus from cryo-electron tomography
-
K. Grunewald, P. Desai, D.C. Winkler, J.B. Heymann, D.M. Belnaps, W. Baumeister, and A.C. Steven 3D structure of herpes simplex virus from cryo-electron tomography Science 302 2003 1396 1398
-
(2003)
Science
, vol.302
, pp. 1396-1398
-
-
Grunewald, K.1
Desai, P.2
Winkler, D.C.3
Heymann, J.B.4
Belnaps, D.M.5
Baumeister, W.6
Steven, A.C.7
-
16
-
-
0034619668
-
Structure of the bacteriophage phi29 DNA packaging motor
-
A.A. Simpson, Y. Tao, P.G. Leiman, M.O. Badasso, Y. He, P.J. Jardine, N.H. Olson, M. Morais, S. Grimes, D.L. Anderson, T.S. Baker, and M.G. Rossmann Structure of the bacteriophage phi29 DNA packaging motor Nature 408 2000 745 750
-
(2000)
Nature
, vol.408
, pp. 745-750
-
-
Simpson, A.A.1
Tao, Y.2
Leiman, P.G.3
Badasso, M.O.4
He, Y.5
Jardine, P.J.6
Olson, N.H.7
Morais, M.8
Grimes, S.9
Anderson, D.L.10
Baker, T.S.11
Rossmann, M.G.12
-
17
-
-
0036301072
-
Detailed architecture of a DNA translocating machine: The high-resolution structure of the bacteriophage phi29 connector particle
-
A. Guasch, J. Pous, B. Ibarra, F.X. Gomis-Ruth, J.M. Valpuesta, N. Sousa, J.L. Carrascosa, and M. Coll Detailed architecture of a DNA translocating machine: the high-resolution structure of the bacteriophage phi29 connector particle J. Mol. Biol. 315 2002 663 676
-
(2002)
J. Mol. Biol.
, vol.315
, pp. 663-676
-
-
Guasch, A.1
Pous, J.2
Ibarra, B.3
Gomis-Ruth, F.X.4
Valpuesta, J.M.5
Sousa, N.6
Carrascosa, J.L.7
Coll, M.8
-
18
-
-
0037451286
-
Structure of a viral DNA gatekeeper at 10 Å resolution by cryo-electronmicroscopy
-
E. Orlova, B. Gowen, A. Dröge, B. Stiege, F. Weise, R. Lurz, M. van Heel, and P. Tavares Structure of a viral DNA gatekeeper at 10 Å resolution by cryo-electronmicroscopy EMBO J. 22 2003 1255 1262
-
(2003)
EMBO J.
, vol.22
, pp. 1255-1262
-
-
Orlova, E.1
Gowen, B.2
Dröge, A.3
Stiege, B.4
Weise, F.5
Lurz, R.6
Van Heel, M.7
Tavares, P.8
-
19
-
-
0033791370
-
Structural analysis of the bacteriophage T3 head-to-tail connector
-
J.M. Valpuesta, N. Sousa, L. Barthelemy, J. Fernandez, H. Fujisawa, B. Ibarra, and J.L. Carrascosa Structural analysis of the bacteriophage T3 head-to-tail connector J. Struct. Biol. 131 2000 146 155
-
(2000)
J. Struct. Biol.
, vol.131
, pp. 146-155
-
-
Valpuesta, J.M.1
Sousa, N.2
Barthelemy, L.3
Fernandez, J.4
Fujisawa, H.5
Ibarra, B.6
Carrascosa, J.L.7
-
20
-
-
0037436386
-
A second symmetry mismatch at the portal vertex of bacteriophage T7: 8-fold symmetry in the procapsid core
-
M.E. Cerritelli, B.L. Trus, C.S. Smith, N. Cheng, J.F. Conway, and A.C. Steven A second symmetry mismatch at the portal vertex of bacteriophage T7: 8-fold symmetry in the procapsid core J. Mol. Biol. 327 2003 1 6
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 1-6
-
-
Cerritelli, M.E.1
Trus, B.L.2
Smith, C.S.3
Cheng, N.4
Conway, J.F.5
Steven, A.C.6
-
21
-
-
0039538633
-
Symmetry mismatch and DNA packaging in large bacteriophages
-
R. Hendrix Symmetry mismatch and DNA packaging in large bacteriophages Proc. Natl. Acad. Sci. U. S. A. 75 1978 4779 4783
-
(1978)
Proc. Natl. Acad. Sci. U. S. A.
, vol.75
, pp. 4779-4783
-
-
Hendrix, R.1
-
22
-
-
0027418576
-
The portal protein of bacteriophage SPP1: A DNA pump with 13-fold symmetry
-
P. Dube, P. Tavares, R. Lurz, and v.H.M. The portal protein of bacteriophage SPP1: a DNA pump with 13-fold symmetry EMBO J. 12 1993 1303 1309
-
(1993)
EMBO J.
, vol.12
, pp. 1303-1309
-
-
Dube, P.1
Tavares, P.2
Lurz, R.3
Van Heel, M.4
-
23
-
-
0036043690
-
Structure and function of phi29 hexameric RNA that drives the viral DNA packaging motor
-
P. Guo Structure and function of phi29 hexameric RNA that drives the viral DNA packaging motor Prog. Nucleic Acid Res. Mol. Biol. 72 2002 415 472
-
(2002)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.72
, pp. 415-472
-
-
Guo, P.1
-
25
-
-
0027983134
-
Analysis of the functional domains of the packaging proteins of phage T3 by site-directed mutagenesis
-
M. Morita, M. Tasaka, and H. Fujisawa Analysis of the functional domains of the packaging proteins of phage T3 by site-directed mutagenesis J. Mol. Biol. 235 1994 248 259
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 248-259
-
-
Morita, M.1
Tasaka, M.2
Fujisawa, H.3
-
26
-
-
0029129145
-
Virus DNA packaging: The strategy used by phage lambda
-
C. Catalano, D. Cue, and M. Feiss Virus DNA packaging: the strategy used by phage lambda Mol. Microbiol. 16 1995 1075 1086
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 1075-1086
-
-
Catalano, C.1
Cue, D.2
Feiss, M.3
-
27
-
-
0027480463
-
A superfamily of ATPases with diverse functions containing either classical or deviant ATP-binding motif
-
E.V. Koonin A superfamily of ATPases with diverse functions containing either classical or deviant ATP-binding motif J. Mol. Biol. 229 1993 1165 1174
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 1165-1174
-
-
Koonin, E.V.1
-
28
-
-
0034634664
-
Functional analysis of the terminase large subunit, G2P, of Bacillus subtilis bacteriophage SPP1
-
A. Gual, A.G. Camacho, and J.C. Alonso Functional analysis of the terminase large subunit, G2P, of Bacillus subtilis bacteriophage SPP1 J. Biol. Chem. 275 2000 35311 35319
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 35311-35319
-
-
Gual, A.1
Camacho, A.G.2
Alonso, J.C.3
-
30
-
-
0033966457
-
The terminase enzyme from bacteriophage lambda: A DNA packaging machine
-
C. Catalano The terminase enzyme from bacteriophage lambda: a DNA packaging machine Cell. Mol. Life Sci. 57 2000 128 148
-
(2000)
Cell. Mol. Life Sci.
, vol.57
, pp. 128-148
-
-
Catalano, C.1
-
32
-
-
0028871814
-
Evaluation of comparative protein modeling by MODELLER
-
A. Sali, L. Potterton, F. Yuan, H. van Vlijmen, and M. Karplus Evaluation of comparative protein modeling by MODELLER Proteins 23 1995 318 326
-
(1995)
Proteins
, vol.23
, pp. 318-326
-
-
Sali, A.1
Potterton, L.2
Yuan, F.3
Van Vlijmen, H.4
Karplus, M.5
-
33
-
-
0034843745
-
Easier threading through web-based comparisons and cross-validations
-
D. Douguet, and G. Labesse Easier threading through web-based comparisons and cross-validations Bioinformatics 17 2001 752 753
-
(2001)
Bioinformatics
, vol.17
, pp. 752-753
-
-
Douguet, D.1
Labesse, G.2
-
34
-
-
0018932980
-
DNA packaging by the double-stranded DNA bacteriophages
-
W.C. Earnshaw, and S.R. Casjens DNA packaging by the double-stranded DNA bacteriophages Cell 21 1980 319 331
-
(1980)
Cell
, vol.21
, pp. 319-331
-
-
Earnshaw, W.C.1
Casjens, S.R.2
-
35
-
-
0030669286
-
Encapsidated conformation of bacteriophage T7 DNA
-
M.E. Cerritelli, N. Cheng, A. Rosenberg, C. McPherson, F. Booy, and A. Steven Encapsidated conformation of bacteriophage T7 DNA Cell 91 1997 271 280
-
(1997)
Cell
, vol.91
, pp. 271-280
-
-
Cerritelli, M.E.1
Cheng, N.2
Rosenberg, A.3
McPherson, C.4
Booy, F.5
Steven, A.6
-
37
-
-
0031688164
-
Hexagonally packed DNA within bacteriophage T7 stabilized by curvature stress
-
T. Odijk Hexagonally packed DNA within bacteriophage T7 stabilized by curvature stress Biophys. J. 75 1998 1223 1227
-
(1998)
Biophys. J.
, vol.75
, pp. 1223-1227
-
-
Odijk, T.1
-
39
-
-
0035909370
-
The bacteriophage straight phi29 portal motor can package DNA against a large internal force
-
D.E. Smith, S.J. Tans, S.B. Smith, S. Grimes, D.L. Anderson, and C. Bustamante The bacteriophage straight phi29 portal motor can package DNA against a large internal force Nature 413 2001 748 752
-
(2001)
Nature
, vol.413
, pp. 748-752
-
-
Smith, D.E.1
Tans, S.J.2
Smith, S.B.3
Grimes, S.4
Anderson, D.L.5
Bustamante, C.6
-
40
-
-
0026720147
-
Dynamics of double-stranded DNA replication from bacteriophage
-
I.S. Gabashvili, and A. Grosberg Dynamics of double-stranded DNA replication from bacteriophage J. Biomol. Struct. Dyn. 9 1992 911 920
-
(1992)
J. Biomol. Struct. Dyn.
, vol.9
, pp. 911-920
-
-
Gabashvili, I.S.1
Grosberg, A.2
-
42
-
-
2442673189
-
Main features on tailed phage, host recognition and DNA uptake
-
L. Letellier, P. Boulanger, L. Plancon, P. Jacquot, and M. Santamaria Main features on tailed phage, host recognition and DNA uptake Front. Biosci. 1 2004 1228 1239
-
(2004)
Front. Biosci.
, vol.1
, pp. 1228-1239
-
-
Letellier, L.1
Boulanger, P.2
Plancon, L.3
Jacquot, P.4
Santamaria, M.5
-
43
-
-
4344657166
-
Bacteriophage T7 DNA ejection into cells is initiated by an enzyme-like mechanism
-
P. Kemp, M. Gupta, and I.J. Molineux Bacteriophage T7 DNA ejection into cells is initiated by an enzyme-like mechanism Mol. Microbiol. 53 2004 1251 1265
-
(2004)
Mol. Microbiol.
, vol.53
, pp. 1251-1265
-
-
Kemp, P.1
Gupta, M.2
Molineux, I.J.3
-
44
-
-
0035043999
-
No syringes please, ejection of phage T7 DNA from the virion is enzyme driven
-
I.J. Molineux No syringes please, ejection of phage T7 DNA from the virion is enzyme driven Mol. Microbiol. 40 2001 1 8
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 1-8
-
-
Molineux, I.J.1
-
45
-
-
1942501103
-
The push-pull mechanism of bacteriophage phi29 DNA injection
-
V. Gonzalez-Huici, M. Salas, and J. Hermoso The push-pull mechanism of bacteriophage phi29 DNA injection Mol. Microbiol. 52 2004 529 540
-
(2004)
Mol. Microbiol.
, vol.52
, pp. 529-540
-
-
Gonzalez-Huici, V.1
Salas, M.2
Hermoso, J.3
-
47
-
-
0037340654
-
Forces and pressures in DNA packaging and release from viral capsids
-
S. Tzlil, J. Kindt, W.M. Gelbart, and A. Ben-Shaul Forces and pressures in DNA packaging and release from viral capsids Biophys. J. 84 2003 1616 1627
-
(2003)
Biophys. J.
, vol.84
, pp. 1616-1627
-
-
Tzlil, S.1
Kindt, J.2
Gelbart, W.M.3
Ben-Shaul, A.4
-
49
-
-
0042925427
-
Osmotic pressure inhibition of DNA ejection from phage
-
A. Evilevitch, L. Lavelle, C.M. Knobler, E. Raspaud, and W.M. Gelbart Osmotic pressure inhibition of DNA ejection from phage Proc. Natl. Acad. Sci. U. S. A. 100 2003 9292 9295
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 9292-9295
-
-
Evilevitch, A.1
Lavelle, L.2
Knobler, C.M.3
Raspaud, E.4
Gelbart, W.M.5
-
50
-
-
11244340515
-
Measurements of DNA lengths remaining in a viral capsid after osmotically suppressed partial ejection
-
A. Evilevitch, J. Gober, M. Philips, C.M. Knobler, and W.M. Gelbart Measurements of DNA lengths remaining in a viral capsid after osmotically suppressed partial ejection Biophys. J. 88 2005 751 756
-
(2005)
Biophys. J.
, vol.88
, pp. 751-756
-
-
Evilevitch, A.1
Gober, J.2
Philips, M.3
Knobler, C.M.4
Gelbart, W.M.5
-
51
-
-
0010287406
-
Purification and structural and functional characterization of FhuA, a transporter of the E. coli outer membrane
-
P. Boulanger, M. LeMaire, M. Bonhivers, S. Dubois, M. Desmadril, and L. Letellier Purification and structural and functional characterization of FhuA, a transporter of the E. coli outer membrane Biochemistry 35 1996 14216 14224
-
(1996)
Biochemistry
, vol.35
, pp. 14216-14224
-
-
Boulanger, P.1
Lemaire, M.2
Bonhivers, M.3
Dubois, S.4
Desmadril, M.5
Letellier, L.6
-
52
-
-
0343832742
-
Reconstitution of FhuA, an Escherichia coli outer membrane protein, into liposomes-binding of phage T5 to FhuA triggers the transfer of DNA into the proteoliposomes
-
L. Plançon, M. Chami, and L. Letellier Reconstitution of FhuA, an Escherichia coli outer membrane protein, into liposomes-binding of phage T5 to FhuA triggers the transfer of DNA into the proteoliposomes J. Biol. Chem. 272 1997 16868 16872
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 16868-16872
-
-
Plançon, L.1
Chami, M.2
Letellier, L.3
-
54
-
-
0026253815
-
Condensation of DNA by multivalent cations: Considerations on mechanism
-
V.A. Bloomfield Condensation of DNA by multivalent cations: considerations on mechanism Biopolymers 31 1991 1471 1481
-
(1991)
Biopolymers
, vol.31
, pp. 1471-1481
-
-
Bloomfield, V.A.1
-
55
-
-
0034691030
-
DNA delivery by phage as a strategy for encapsulating toroidal condensates of arbitrary size into liposomes
-
O. Lambert, L. Letellier, W.M. Gelbart, and J.L. Rigaud DNA delivery by phage as a strategy for encapsulating toroidal condensates of arbitrary size into liposomes Proc. Natl. Acad. Sci. U. S. A. 97 2000 7248 7253
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 7248-7253
-
-
Lambert, O.1
Letellier, L.2
Gelbart, W.M.3
Rigaud, J.L.4
-
56
-
-
0035822681
-
FhuA-mediated phage genome transfer into liposomes: A cryo-electron tomography study
-
J. Böhm, O. Lambert, F.A.S., L. Letellier, B.W., and J.L. Rigaud FhuA-mediated phage genome transfer into liposomes: a cryo-electron tomography study Curr. Biol. 11 2001 1168 1175
-
(2001)
Curr. Biol.
, vol.11
, pp. 1168-1175
-
-
Böhm, J.1
Lambert, O.2
Letellier, L.3
Rigaud, J.L.4
-
57
-
-
0026726725
-
Involvement of phage tail proteins and contact sites between the outer and inner membrane of E. coli in phage T5 DNA injection
-
G. Guihard, P. Boulanger, and L. Letellier Involvement of phage tail proteins and contact sites between the outer and inner membrane of E. coli in phage T5 DNA injection J. Biol. Chem. 267 1992 3173 3178
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 3173-3178
-
-
Guihard, G.1
Boulanger, P.2
Letellier, L.3
-
59
-
-
14744274379
-
DNA ejection from bacteriophage T5: Analysis of the kinetics and energetics
-
M. de Frutos, L. Letellier, and E. Raspaud DNA ejection from bacteriophage T5: analysis of the kinetics and energetics Biophys. J. 88 2005 1364 1370
-
(2005)
Biophys. J.
, vol.88
, pp. 1364-1370
-
-
De Frutos, M.1
Letellier, L.2
Raspaud, E.3
-
60
-
-
0029156537
-
Specific single-stranded breaks in mature bacteriophage T7 DNA
-
S.A. Khan, S.J. Hayes, E.T. Wright, R.H. Watson, and P. Serwer Specific single-stranded breaks in mature bacteriophage T7 DNA Virology 211 1995 329 331
-
(1995)
Virology
, vol.211
, pp. 329-331
-
-
Khan, S.A.1
Hayes, S.J.2
Wright, E.T.3
Watson, R.H.4
Serwer, P.5
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