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Volumn 87, Issue 8, 2005, Pages 725-735

Self-organisation of an oligodeoxynucleotide containing the G- and C-rich stretches of the direct repeats of the human mitochondrial DNA

Author keywords

Direct repeat; DNA tetramers; Mitochondrial DNA; NMR; Triple helix

Indexed keywords

HYDROGEN; MITOCHONDRIAL DNA; OLIGODEOXYRIBONUCLEOTIDE; TETRAMER;

EID: 23044453647     PISSN: 03009084     EISSN: 61831638     Source Type: Journal    
DOI: 10.1016/j.biochi.2005.03.009     Document Type: Article
Times cited : (6)

References (28)
  • 1
    • 0026290175 scopus 로고
    • Altered gene expression correlates with DNA structure
    • Y. Kohwi, and T. Kohwi-Shigematsu Altered gene expression correlates with DNA structure Genes Dev. 5 1991 2547 2554
    • (1991) Genes Dev. , vol.5 , pp. 2547-2554
    • Kohwi, Y.1    Kohwi-Shigematsu, T.2
  • 4
    • 0019978703 scopus 로고
    • Replication of animal mitochondrial DNA
    • D.A. Clayton Replication of animal mitochondrial DNA Cell 28 1982 693 705
    • (1982) Cell , vol.28 , pp. 693-705
    • Clayton, D.A.1
  • 6
    • 0024317560 scopus 로고
    • Spontaneous Kearns-Sayre/chronic external ophthalmoplegia plus syndrome associated with a mitochondrial DNA deletion: A slip-replication model and metabolic therapy
    • J.M. Shoffner, M.T. Lott, A.S. Voljavec, S.A. Soueidan, D.A. Costigan, and D.C. Wallace Spontaneous Kearns-Sayre/chronic external ophthalmoplegia plus syndrome associated with a mitochondrial DNA deletion: a slip-replication model and metabolic therapy Proc. Natl. Acad. Sci. USA 86 1989 7952 7956
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 7952-7956
    • Shoffner, J.M.1    Lott, M.T.2    Voljavec, A.S.3    Soueidan, S.A.4    Costigan, D.A.5    Wallace, D.C.6
  • 8
    • 0024596946 scopus 로고
    • Direct repeat is a hot spot for large-scale deletions of human mitochondrial DNA
    • E.A. Schon, R. Rizutto, C.T. Moraes, H. Nakase, M. Zeviani, and S.A. Di Mauro Direct repeat is a hot spot for large-scale deletions of human mitochondrial DNA Science 288 1989 346 349
    • (1989) Science , vol.288 , pp. 346-349
    • Schon, E.A.1    Rizutto, R.2    Moraes, C.T.3    Nakase, H.4    Zeviani, M.5    Di Mauro, S.A.6
  • 9
    • 0036020222 scopus 로고    scopus 로고
    • Base composition at mtDNA boundaries suggests a DNA triple helix model for human mitochondrial DNA large-scale rearrangements
    • C. Rocher, T. Letellier, W.C. Copeland, and P. Lestienne Base composition at mtDNA boundaries suggests a DNA triple helix model for human mitochondrial DNA large-scale rearrangements Mol. Genet. Metab. 76 2002 123 132
    • (2002) Mol. Genet. Metab. , vol.76 , pp. 123-132
    • Rocher, C.1    Letellier, T.2    Copeland, W.C.3    Lestienne, P.4
  • 10
    • 0035880918 scopus 로고    scopus 로고
    • Initiation of DNA replication by DNA polymerases from primers forming a triple helix
    • C. Rocher, R. Dalibart, T. Letellier, G. Precigoux, and P. Lestienne Initiation of DNA replication by DNA polymerases from primers forming a triple helix Nucleic Acids Res. 29 2001 3320 3326
    • (2001) Nucleic Acids Res. , vol.29 , pp. 3320-3326
    • Rocher, C.1    Dalibart, R.2    Letellier, T.3    Precigoux, G.4    Lestienne, P.5
  • 11
    • 0242331283 scopus 로고    scopus 로고
    • Elongation of oligonucleotide primers forming a triple helix on double-stranded DNA templates by purified DNA polymerases
    • P. Lestienne, P. Pourquier, and J. Bonnet Elongation of oligonucleotide primers forming a triple helix on double-stranded DNA templates by purified DNA polymerases Biochem. Biophys. Res. Commun. 311 2003 380 385
    • (2003) Biochem. Biophys. Res. Commun. , vol.311 , pp. 380-385
    • Lestienne, P.1    Pourquier, P.2    Bonnet, J.3
  • 12
    • 33845555707 scopus 로고
    • Exchangeable proton NMR without base-line distortion, using new strong-pulse sequences
    • P. Plateau, and M. Gúron Exchangeable proton NMR without base-line distortion, using new strong-pulse sequences J. Am. Chem. Soc. 104 1982 7310 7311
    • (1982) J. Am. Chem. Soc. , vol.104 , pp. 7310-7311
    • Plateau, P.1    Gúron, M.2
  • 13
    • 0032556228 scopus 로고    scopus 로고
    • Single scan, sensitivity- and gradient-enhanced TROSY for multidimensional NMR experiments
    • J. Weigelt Single scan, sensitivity- and gradient-enhanced TROSY for multidimensional NMR experiments J. Am. Chem. Soc. 120 1998 10778 10779
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 10778-10779
    • Weigelt, J.1
  • 15
    • 0032508468 scopus 로고    scopus 로고
    • Following G-quartet formation by UV spectroscopy
    • J.L. Mergny, A.-T. Phan, and L. Lacroix Following G-quartet formation by UV spectroscopy FEBS Lett. 453 1998 74 78
    • (1998) FEBS Lett. , vol.453 , pp. 74-78
    • Mergny, J.L.1    Phan, A.-T.2    Lacroix, L.3
  • 16
    • 0037436411 scopus 로고    scopus 로고
    • Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA) (4)
    • J.H. Thorpe, B.C. Gale, S.C. Teixeira, and C.J. Cardin Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA) (4) J. Mol. Biol. 327 2003 97 109
    • (2003) J. Mol. Biol. , vol.327 , pp. 97-109
    • Thorpe, J.H.1    Gale, B.C.2    Teixeira, S.C.3    Cardin, C.J.4
  • 17
    • 0027278767 scopus 로고
    • A tetrameric DNA structure with protonated cytosine.cytosine base pairs
    • K. Gehring, J.L. Leroy, and M. Gueron A tetrameric DNA structure with protonated cytosine.cytosine base pairs Nature 363 1993 561 565
    • (1993) Nature , vol.363 , pp. 561-565
    • Gehring, K.1    Leroy, J.L.2    Gueron, M.3
  • 18
    • 0024787884 scopus 로고
    • Monovalent cation-induced structure of telomeric DNA: The G-quartet model
    • J.R. Williamson, M.K. Raghuraman, and T.R. Cech Monovalent cation-induced structure of telomeric DNA: the G-quartet model Cell 59 1989 871 880
    • (1989) Cell , vol.59 , pp. 871-880
    • Williamson, J.R.1    Raghuraman, M.K.2    Cech, T.R.3
  • 19
    • 0014271907 scopus 로고
    • Studies on the conformation of protonated DNA
    • C. Zimmer, G. Luck, H. Venner, and J. Fric Studies on the conformation of protonated DNA Biopolymers 6 1968 563 574
    • (1968) Biopolymers , vol.6 , pp. 563-574
    • Zimmer, C.1    Luck, G.2    Venner, H.3    Fric, J.4
  • 20
    • 0032488878 scopus 로고    scopus 로고
    • The contribution of cytosine protonation to the stability of parallel DNA triple helices
    • J.L. Asensio, A.N. Lane, J. Dhesi, S. Bergqvist, and T. Brown The contribution of cytosine protonation to the stability of parallel DNA triple helices J. Mol. Biol. 275 5 1998 811 822
    • (1998) J. Mol. Biol. , vol.275 , Issue.5 , pp. 811-822
    • Asensio, J.L.1    Lane, A.N.2    Dhesi, J.3    Bergqvist, S.4    Brown, T.5
  • 21
    • 0028781381 scopus 로고
    • DNA triplexes: Solution structures, hydration sites, energetics, interactions, and function
    • I. Radhakrishnan, and D.J. Patel DNA triplexes: solution structures, hydration sites, energetics, interactions, and function Biochemistry 33 1994 11405 11416
    • (1994) Biochemistry , vol.33 , pp. 11405-11416
    • Radhakrishnan, I.1    Patel, D.J.2
  • 24
    • 0027185318 scopus 로고
    • Conformational properties of DNA hairpins with TTT and TTTT loops
    • S.M. Baxter, M.B. Greizerstein, D.M. Kushlan, and G.W. Ashley Conformational properties of DNA hairpins with TTT and TTTT loops Biochemistry 32 1993 8702 8711
    • (1993) Biochemistry , vol.32 , pp. 8702-8711
    • Baxter, S.M.1    Greizerstein, M.B.2    Kushlan, D.M.3    Ashley, G.W.4
  • 26
    • 0002216849 scopus 로고    scopus 로고
    • Structures of guanine-rich and cytosine-rich quadruplexes formed in vitro by telomeric, centromeric, and triplet repeat disease DNA sequences
    • S. Neidle Oxford University Press Oxford
    • D.J. Patel, S. Bouaziz, A. Kettani, and Y. Wang Structures of guanine-rich and cytosine-rich quadruplexes formed in vitro by telomeric, centromeric, and triplet repeat disease DNA sequences S. Neidle Oxford Handbook of Nucleic Acid Structure 1999 Oxford University Press Oxford 389 453
    • (1999) Oxford Handbook of Nucleic Acid Structure , pp. 389-453
    • Patel, D.J.1    Bouaziz, S.2    Kettani, A.3    Wang, Y.4
  • 27
    • 0025695560 scopus 로고
    • Sequences near the origin of replication of the DHFR locus of Chinese hamster ovary cells adopt left-handed Z-DNA and triplex structures
    • A. Bianchi, R.D. Wells, N.H. Heintz, and M.S. Caddle Sequences near the origin of replication of the DHFR locus of Chinese hamster ovary cells adopt left-handed Z-DNA and triplex structures J. Biol. Chem. 265 1990 21789 21796
    • (1990) J. Biol. Chem. , vol.265 , pp. 21789-21796
    • Bianchi, A.1    Wells, R.D.2    Heintz, N.H.3    Caddle, M.S.4
  • 28
    • 0037131228 scopus 로고    scopus 로고
    • A long GAA.GAA.TTC triplex that is formed intramolecularly, in the sequence of intron I of the frataxin gene
    • A.A. Vetcher, M. Napierala, R.R. Iyer, P.D. Chastain, J.D. Griffith, and R.D. Wells a long GAA.GAA.TTC triplex that is formed intramolecularly, in the sequence of intron I of the frataxin gene J. Biol. Chem. 277 2002 39217 39227
    • (2002) J. Biol. Chem. , vol.277 , pp. 39217-39227
    • Vetcher, A.A.1    Napierala, M.2    Iyer, R.R.3    Chastain, P.D.4    Griffith, J.D.5    Wells, R.D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.