Quantitative trait loci for partial resistance to crown rust, Puccinia coronata, in cultivated oat, Avena sativa L.

Theoretical and Applied Genetics

Volumn 111, Issue 2, 2005, Pages 313-324

  Portyanko, V A ^a   Chen, G ^a,c   Rines, H W ^a   Phillips, R L ^a   Leonard, K J ^a,b   Ochocki, G E ^b   Stuthman, D D ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

^b USDA Agricultural Research Service Cereal Disease Laboratory   (United States)

^c Cereal Research Centre   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

GREENHOUSE EFFECT; MAPPING;

CROWN RUST; FLOWERING TIME; FRAGMENT LENGTH; POLYMORPHOSIMS;

GENETIC ENGINEERING;

ARTICLE; BASIDIOMYCETES; CHROMOSOME MAP; COMPARATIVE STUDY; CROSS BREEDING; FLOWER; GENETICS; INNATE IMMUNITY; MICROBIOLOGY; NUCLEIC ACID AMPLIFICATION; OAT; PHYSIOLOGY; PLANT DISEASE; QUANTITATIVE TRAIT LOCUS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

AVENA SATIVA; BASIDIOMYCOTA; CHROMOSOME MAPPING; CROSSES, GENETIC; FLOWERS; IMMUNITY, NATURAL; NUCLEIC ACID AMPLIFICATION TECHNIQUES; PLANT DISEASES; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; QUANTITATIVE TRAIT LOCI;

AVENA SATIVA; PUCCINIA CORONATA; PUCCINIA CORONATA F. SP. AVENAE;

EID: 22844444698     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-005-2024-6     Document Type: Article

References (48)

1. Berger RD, Luke HH (1979) Spatial and temporal spread of oat crown rust. Phytopathology 69:1199-1201
2. Bush AL, Wise RP (1996) Crown rust resistance loci on linkage groups 4 and 13 in cultivated oat. J Hered 87:427-432
3. Bush AL, Wise RP (1998) High resolution mapping adjacent to the Pc 71 crown-rust resistance locus in hexaploid oat. Mol Breed 4:13-21
4. Bush AL, Wise RP, Rayapati PJ, Lee M (1994) Restriction fragment length polymorphisms linked to genes for resistance to crown rust (Puccinia coronata) in near-isogenic lines of hexaploid oat (Avena sativa). Genome 37:823-831
5. Chen G, Portyanko VA, Rines HW, Phillips RL, Leonard KJ, Ochocki GE, Stuthman DD (2000) Identification of QTLs for partial resistance to crown rust of oats. In: 2000 Agronomy abstracts. American Society of Agronomy, Madison, pp 187
6. Cheng DW, Armstrong KC, Tinker N, Wight CP, He S, Lybaert A, Fedak G, Molnar SJ (2002) Genetic and physical mapping of Lrk10-like receptor kinase sequences in hexaploid oat (Avena sativa L). Genome 45:100-109
7. De Koeyer DL, Phillips RL, Stuthman DD (2001) Allelic shifts and quantitative trait loci in a recurrent selection population of oat. Crop Sci 41:1228-1234
8. De Koeyer DL, Tinker NA, Wight CP, Deyl J, Burrows VD, O'Donoughue LS, Lybaert A, Molnar SJ, Armstrong KC, Fedak G, Wesenberg DM, Rossnagel BG, McElroy AR (2004) A molecular linkage map with associated QTLs from a hulless x covered spring oat population. Theor Appl Genet 108:1285-1298
9. Groh S, Kianian SF, Phillips RL, Rines HW, Stuthman DD, Wesenburg DM, Fulcher RG (2001b) Analysis of factors influencing milling yield and their association to other traits by QTL analysis in two hexaploid oat populations. Theor Appl Genet 103:9-18
10. Groh S, Zacharias A, Kianian SF, Penner GA, Chong J, Rines HW, Phillips RL (2001a) Comparative AFLP mapping in two hexaploid oat populations. Theor Appl Genet 102:876-884
11. Haldane JBS (1919) The combination of linkage values and the calculation of distances between the loci of linked factors. J Genet 8:299-309
12. Harder DE, McKenzie RIH, Martens JW (1980) Inheritance of crown rust resistance in three accessions of Avena sterilis. Can J Genet Cytol 22:27-33
13. Harder DE, McKenzie RIH, Martens JW (1984) Inheritance of adult plant resistance to crown rust in an accession of Avena sterilis. Phytopathology 74:352-353
14. Harder DE, Chong J, Brown PD (1995) Stem and crown rust resistance in the Wisconsin oat selection X1588-2. Crop Sci 35:1011-2015
15. Heagle AS, Moore MB (1970) Some effects of moderate adult resistance to crown rust of oat. Phytopathology 60:461-466
16. Heun M, Kennedy AE, Anderson JA, Lapitan NLV, Sorrells ME, Tanksley SD (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare). Genome 34:437-447
17. Holland JB, Moser HS, O'Donoughue LS, Lee M (1997) QTLs and epistasis associated with vernalization responses in oat. Crop Sci 37:1306-1316
18. Holland JB, Portyanko VA, Hoffman DA, Lee M (2002) Genomic regions controlling vernalization and photoperiod responses in oat. Theor Appl Genet 105:113-126
19. Irigoyen ML, Loarce Y, Fominaya A, Ferrer E (2004) Isolation and mapping of resistance gene analogs from the Avena strigosa genome. Theor Appl Genet 109:713-724
20. Jin H, Domier LL, Kolb FL, Brown CM (1998) Identification of quantitative loci for tolerance to barley yellow dwarf virus in oat. Phytopathology 88:410-415
21. Kianian SF, Egli MA, Phillips RL, Rines HW, Somers DA, Gengenbach BG, Webster FH, Livingston SM, Groh S, O'Donoughue LS, Sorrells ME, Wesenberg DM, Stuthman DD, Fulcher RG (1999) Association of a major groat oil content QTL and an acetyl-CoA carboxylase gene in oat. Theor Appl Genet 98:884-894
22. Kiehn FS, McKenzie RIH, Harder DE (1976) Inheritance of resistance to Puccinia coronata avenae and its associations with seed characteristics on four accessions of Avena sterilis. Can J Genet Cytol 18:717-726
23. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181
24. Leister D, Kurth J, Laurie DA, Yano M, Sasaki T, Graner A, Schulze-Lefert P (1999) RFLP and physical mapping of resistance gene homologues in rice (O. sativa) and barley (H. vulgare). Theor Appl Genet 98:509-520
25. Leonard KJ (2002) Oat lines with effective adult plant resistance to crown rust. Plant Dis 86:593-598
26. Li CD, Rossnagel BG, Scoles GJ (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars. Theor Appl Genet 101:1259-1268
27. Luke HH, Barnett RD, Pfahler PL (1975) Inheritance of horizontal resistance to crown rust in oat. Phytopathology 65:631-632
28. Luke HH, Pfahler PL, Barnett RD (1981) Influence of disease severity and environmental conditions on low receptivity of oats to crown rust. Plant Dis 65:125-127
29. Ma Z, Steffenson BJ, Prom LK, Lapitan NLV (2000) Mapping quantitative trait loci for Fusarium head blight resistance in barley. Phytopathology 90:1079-1088
30. O'Donoughue LS, Kianian SF, Rayapati PJ, Penner GA, Tanksley ME, Phillips RL, Rines HW, Lee M, Fedak G, Molnar SJ, Hoffman D, Salas CA, Wu B, Autrique E, Van Deynze A (1995) A molecular linkage map of cultivated oat. Genome 38:368-380
31. O'Donoughue LS, Chong J, Wight CP, Fedak G, Molnar SJ (1996) Localization of stem rust resistance genes and associated molecular markers in cultivated oat. Phytopathology 86:719-727
32. Ohm HW, Shaner G (1992) Breeding oat for resistance to diseases. In: Marshall HG, Sorrells ME (eds) Oat science and technology, Agronomy monograph No 33. American Society of Agronomy and Crop Science Society of America, Madison, pp 657-698
33. Ohm HW, Patterson FL, Roberts JJ, Shaner GF (1974) Registration of Noble oats. Crop Sci 14:906
34. Peterson RF, Campbell AB, Hannah AE (1948) A diagrammatic scale for estimating rust intensity on leaves and stems of cereals. Can J Res Sect C 26:496-500
35. Peturson B (1944) Adult plant resistance of some oat varieties to physiologic races of crown rust. Can J Res Sect C 22:287-289
36. Portyanko VA, Hoffman DL, Lee M, Holland JB (2001) A linkage map of hexaploid oat based on grass anchor DNA clones and its relationship to other oat maps. Genome 44:249-265
37. Rooney WL, Rines HW, Phillips RL (1994) Identification of RFLP markers linked to crown rust resistance genes Pc91 and Pc92 in oat. Crop Sci 39:940-944
38. Saghai Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 81:8014-8018
39. Searle SR (1971) Linear models. Wiley, NY, p 475
40. Simons MD (1985) Crown rust. In: Roelfs AP, Bushnell WR (eds) The cereal rusts, vol II. Diseases, distribution, epidemiology, and control. Academic, Orlando, pp 131-172
41. Siripoonwiwat W, O'Donoughue LS, Wesenberg D, Hoffman DL, Barbosa-Neto JF, Sorrells ME (1996) Chromosomal regions associated with quantitative traits in oat. J Ag Genomics 2 (available at http://www.cabi-publishing.org/jag/ papers96/paper396/indexp396.html)
42. Sokal R, Rohlf FJ (1995) Biometry: the principles and practice of statistics in biological research. Freeman, New York
43. Utz HF, Melchinger AE (1996) PLABQTL: a program for composite interval mapping of QTL. J Ag Genomics 2: (available at http://www.cabi-publishing.org/ jag/index.html).
44. Wight CP, Tinker NA, Kianian SF, Sorrells ME, O'Donoughue, LS, Hoffman DL, Groh S, Scoles GJ, Li CD, Webster FH, Phillips RL, Rines HW, Livingston SM, Armstrong KC, Fedak G, Molnar SJ (2003) A molecular map in 'Kanota' x 'Ogle' hexaploid oat (Avena spp.) enhanced by additional markers and a robust framework. Genome 46:28-47
45. Wight CP, O'Donoughue LS, Chong J, Tinker NA, Molnar SJ (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39and Pc48 in cultivated oat (Avena sativa L). Mol Breed 14:1-13
46. Wise RP, Schnable PS (1994) Mapping complementary genes in maize: Positioning the rf1 and rf2 nuclear-fertility restorer loci of Texas (T)-cytoplasm relative to RFLP and morphological markers. Theor Appl Genet 88:785-795
47. Zhu S, Kaeppler HF (2003) Identification of quantitative trait loci for resistance to crown rust in oat line MAM17-5. Crop Sci 43:358-366
48. Zhu S, Leonard KJ, Kaeppler HF (2003) Quantitative trait loci associated with seedling resistance to isolates of Puccinia coronata in oat. Phytopathology 93:860-866