6 Genetic Methods in Clostridia

Methods in Microbiology

Volumn 29, Issue C, 1999, Pages 191-207

  Young, DI ^a   Evans, VJ ^a   Jefferies, JR ^a   Jennert, KCB ^a   Phillips, ZEV ^a   Ravagnani, A ^a   Young, M ^a  

^a ABERYSTWYTH UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 22644452526     PISSN: 05809517     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0580-9517(08)70117-X     Document Type: Article

References (121)

1. Aktories K., Selzer J., Hofmann F., and Just I. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia: Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 393-407
2. Allen S.P., and Blaschek H.P. Appl. Environ. Microbiol 54 (1988) 2322-2324
3. Allen S.P., and Blaschek H.P. FEMS Microbiol. Lett. 70 (1990) 217-220
4. Awad M.M., and Rood J.I. Microb. Path. 22 (1997) 275-284
5. Awad M.M., Bryant A.E., Stevens D.L., and Rood J.I. Mol. Microbiol. 15 (1995) 191-202
6. Babb B.L., Collett H.J., Reid S.J., and Woods D.R. FEMS Microbiol. Lett. 114 (1993) 343-348
7. Bertram J., Kuhn A., and Dürre P. Arch. Microbiol. 153 (1990) 373-377
8. Brehm J.K., Pennock A., Bullman H.M.S., Young M., Oultram J.D., and Minton N.P. Plasmid 28 (1992) 1-13
9. Brown D.P., Ganova-Raeva L., Green B.D., Wilkinson S.R., Young M., and Youngman P. Mol. Microbiol. 14 (1994) 411-426
10. Bullifent H.L., Moir A., and Titball R.W. FEMS Microbiol. Lett. 131 (1995) 99-105
11. Caillaud F., Carlier C., and Courvalin P. Plasmid 17 (1987) 58-60
12. Canard B., and Cole S.T. Proc. Natl. Acad. Sci. USA 86 (1989) 6676-6680
13. Chalfie M., Tu Y., Euskirchen G., Ward W.W., and Prasher D.C. Science 263 (1994) 802-805
14. Chambers S.P., Prior S.E., Barstow D.A., and Minton N.P. Gene 68 (1988) 139-149
15. Chassy B.M., Mercenier A., and Flickinger J. Trends Biotechnol. 6 (1988) 303-309
16. Chen J.-S. In: Woods D.R. (Ed). The Clostridia and Biotechnology (1993), Butterworth, Boston 51-76
17. Clewell D.B., and Flannagan S.E. In: Clewell D.B. (Ed). Bacterial Conjugation (1993), Plenum, New York 369-393
18. Collins M.D., Lawson P.A., Willems A., Cordoba J.J., Fernandez-Garayzabal J., Garcia P., Cai J., Hippe H., and Farrow J.A.E. Int. J. Syst. Bacteriol. 44 (1994) 812-826
19. Collins M.E., Oultram J.D., and Young M. J. Gen. Microbiol. 131 (1985) 2097-2105
20. E. Cornillot, (1996). PhD Thesis, INSA, Toulouse, France.
21. Cornillot E., and Soucaille P. Nature 380 (1996) 489
22. Cornillot E., Saint-Joanis B., Daube G., Katayama S., Granum P.E., Canard B., and Cole S.T. Mol. Microbiol. 15 (1995) 639-647
23. Cornillot E., Nair R.V., Papoutsakis E.T., and Soucaille P. J. Bacteriol. 179 (1997) 5442-5447
24. Dürre P., Fischer R.J., Kuhn A., Lorenz K., Schreiber W., Sturzenhofecker B., Ullmann S., Winzer K., and Sauer U. FEMS Microbiol. Rev. 17 (1995) 251-262
25. Evans V.J., Liyanage H., Ravagnani A., Young M., and Kashket E.R. Truncation of peptide deformylase reduces the growth rate and stabilizes solvent production in Clostridium beijerinckii NCIMB 8052. Appl. Environ. Microbiol. 64 (1998) 1780-1785
26. Flannagan S.E., Zitzow L.A., and Clewell D.B. Plasmid 32 (1994) 350-354
27. Gawron-Burke C., and Clewell D.B. J. Bacteriol. 159 (1984) 214-221
28. Green E.M., and Bennett G.N. Appl. Biochem. Biotechnol. 57 (1996) 213-221
29. Green E.M., Boynton Z.L., Harris L., Rudolph F.B.M., Papoutsakis E.T., and Bennett G.N. Microbiology UK 142 (1996) 2079-2086
30. Heefner D.L., Squires C.H., Evans R.J., Kopp B.J., and Yarus M.J. J. Bacteriol. 159 (1984) 460-464
31. Heim R., Prasher D.C., and Tsien R.Y. Proc. Natl. Acad. Sci. USA 91 (1994) 12501-12504
32. Hein R., and Tsien R.Y. Curr. Biol. 6 (1996) 178-182
33. Henderson I., Davis T., Elmore M., and Minton N.P. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia: Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 261-294
34. Hoch J.A. Ann. Rev. Microbiol. 47 (1993) 441-465
35. Johnson S., and Gerding D.N. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia, Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 117-140
36. Jones D.T. In: Woods D.R. (Ed). The Clostridia and Biotechnology (1993), Butterworth-Heinemann, Boston 77-97
37. Jones D.T., and Woods D.R. Microbiol. Revs. 50 (1986) 484-524
38. Just I., Fritz G., Aktories K., Giry M., Popoff M.R., Boquet P., Hegenbarth S., and von Eichel-Streiber C. J. Biol. Chem. 269 (1994) 10706-10712
39. Just I., Selzer J., Wilm M., von Eichel-Streiber C., Mann M., and Aktories K. Nature 375 (1995) 500-503
40. Kashket E.R., and Cao Z.Y. Appl. Environ. Microbiol. 59 (1993) 4198-4202
41. Kashket E.R., and Cao Z.Y. FEMS Microbiol. Rev. 17 (1995) 307-315
42. Katayama S., Dupuy B., Garnier T., and Cole S.T. J. Bacteriol. 177 (1995) 5680-5685
43. Katayama S., Dupuy B., Daube G., China B., and Cole S.T. Mol. Gen. Genet. 251 (1996) 720-726
44. Keis S., Bennett C.F., Ward V.K., and Jones D.T. Int. J. Syst. Bacteriol. 45 (1995) 693-705
45. Kim A.Y., and Blaschek H.P. Appl. Environ. Microbiol. 55 (1989) 360-365
46. Kokai-Kun J.F., and McClane B.A. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia, Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 325-357
47. Krishnapillai V. FEMS Microbiol. Rev. 54 (1988) 223-238
48. Lee S.Y., Bennett G.N., and Papoutsakis E.T. Biotechnol. Lett. 14 (1992) 427-432
49. Lee S.Y., Mermelstein L.D., Bennett G.N., and Papoutsakis E.T. Ann. NY Acad. Sci. 665 (1992) 39-51
50. Lin W.J., and Johnson E.A. Appl. Environ. Microbiol. 57 (1991) 2946-2950
51. Lin Y.L., and Blaschek H.P. Appl. Environ. Microbiol. 48 (1984) 737-742
52. Luchansky J.B., Muriana P.M., and Klaenhammer T.R. Mol. Microbiol. 2 (1988) 637-646
53. Luczak H., Schwarzmoser H., and Staudenbauer W.L. Appl. Microbiol. Biotechnol. 23 (1985) 114-122
54. Lyras D., and Rood J.I. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia, Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 73-92
55. Maguin E., Duwat P., Hege T., Ehrlich S.D., and Grass A. J. Bacteriol. 174 (1992) 5633-5638
56. Mahony D.E., Mader J.A., and Dubel J.R. Appl. Environ. Microbiol. 54 (1988) 264-267
57. Matsushita C., Matsushita O., Koyama M., and Okabe A. Plasmid 31 (1994) 317-319
58. Mattsson D.M., and Rogers P. J. Indust. Microbiol. 13 (1994) 258-268
59. Melville S.B., Labbe R., and Sonenshein A.L. Infect. Immun. 62 (1994) 5550-5558
60. Mermelstein L.D., and Papoutsakis E.T. Appl. Environ. Microbiol. 59 (1993) 1077-1081
61. Mermelstein L.D., Welker N.E., Bennett G.N., and Papoutsakis E.T. BioTechnology 10 (1992) 190-195
62. Mermelstein L.D., Papoutsakis E.T., Petersen D.J., and Bennett G.N. Biotechnol. Bioeng. 42 (1993) 1053-1060
63. Minton N.P., Brehm J.K., Swinfield T.-J., Whelan S.M., Mauchline M.L., Bodsworth N., and Oultram J.D. In: Woods D.R. (Ed). The Clostridia and Biotechnology (1993), Butterworth, Boston 119-150
64. Minton N.P., Swinfield T.-J., Brehm J.K., Whelan S.M., and Oultram J.D. In: Sebald M. (Ed). Genetics and Molecular Biology of Anaerobic Bacteria (1993), Springer-Verlag, New York 120-140
65. Mitchell W.J. Physiology of carbohydrate to solvent conversion by Clostridia. Adv. Microb. Physiol. 39 (1998) 31-130
66. Moncrief J.S., Lyerly D.M., and Wilkins T.D. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia: Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 369-392
67. Mullany P., Wilks M., Lamb I., Clayton C., Wren B., and Tabaqchali S. J. Gen Microbiol. 136 (1990) 1343-1349
68. Mullany P., Wilks M., and Tabaqchali S. FEMS Microbiol. Lett. 79 (1991) 191-194
69. Mullany P., Wilks M., Puckey L., and Tabaqchali S. Plasmid 31 (1994) 320-323
70. Nair R.V., and Papoutsakis E.T. J. Bacteriol. 176 (1994) 5843-5846
71. Nassif X., Puaoi D., and So M. J. Bacteriol. 173 (1991) 2147-2154
72. Ninomiya M., Matsushita O., Minami J., Sakamoto H., Nakano M., and Okabe A. Infect. Immun. 62 (1994) 5032-5039
73. O'Brien R.W., and Morris J.G. J. Gen. Microbiol. 68 (1971) 307-318
74. Oultram J.D., Davies A., and Young M. FEMS Microbiol. Lett. 42 (1987) 113-119
75. Oultram J.D., Loughlin M., Swinfield T.J., Brehm J.K., Thompson D.E., and Minton N.P. FEMS Microbiol. Lett. 56 (1988) 83-88
76. Papoutsakis E.T., and Bennett G.N. In: Woods D.R. (Ed). The Clostridia and Biotechnology (1993), Butterworth, Boston 157-199
77. Petit M.A., Bruand C., Jannière L., and Ehrlich S.D. J. Bacteriol. 172 (1990) 6736-6740
78. Phillips-Jones M.K. FEMS Microbiol. Lett. 66 (1990) 221-226
79. Phillips-Jones M.K. FEMS Microbiol. Lett. 106 (1993) 265-270
80. Phillips-Jones M.K. In: Nickoloff J.A. (Ed). Electroporation Protocols for Micro-organisms (1995), Humana Press Inc, Totowa, New Jersey 227-235
81. Poyart-Salmeron C., Trieu-Cuot P., Carlier C., and Courvalin P. EMBO J. 8 (1989) 2425-2433
82. Poyart-Salmeron C., Trieu-Cuot P., Carlier C., and Courvalin P. Mol. Microbiol. 4 (1990) 1513-1521
83. Reid S.J., Allcock E.R., Jones D.T., and Woods D.R. Appl. Environ. Microbiol. 45 (1983) 305-307
84. Reysset G. In: Sebald M. (Ed). Genetics and Molecular Biology of Anaerobic Bacteria (1993), Springer-Verlag, New York 111-119
85. Reysset G., and Sebald M. In: Woods D.R. (Ed). The Clostridia and Biotechnology (1993), Butterworth-Heinemann, Boston 151-156
86. Reysset G., Hubert J., Podvin L., and Sebald M. Biotechnol. Tech. 2 (1988) 199-204
87. Roberts I., Holmes W.M., and Hylemon P.B. Appl. Environ. Microbiol. 54 (1988) 268-270
88. Rood J.I. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia: Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 65-72
89. Rood J.I., and Cole S.T. Microbiol. Rev. 55 (1991) 621-648
90. Rood J.I., McClane B.A., Songer G.J., and Titball R.W. The Clostridia: Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 533
91. Roos J.W., McLaughlin J.K., and Papoutsakis E.T. Biotechnol. Bioeng. 27 (1985) 681-694
92. Sauer U., and Durre P. FEMS Microbiol. Lett. 100 (1992) 147-153
93. Schiavo G., and Montecucco C. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia: Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 295-322
94. Scott J.R., and Churchward G.G. Ann. Rev. Microbiol. 49 (1995) 367-397
95. Scott P.T., and Rood J.I. Gene 82 (1989) 327-333
96. Sebald M. In: Sebald M. (Ed). Genetics and Molecular Biology of Anaerobic Bacteria (1993), Springer-Verlag, New York 64-97
97. Simon R., Priefer U., and Puhler A. BioTechnology 1 (1983) 784-791
98. Simon R., Priefer U., and Puhler A. In: Puhler A. (Ed). Molecular Genetics of Bacteria-Plant Interaction (1983), Springer-Verlag, Berlin 98-106
99. Sloan J., Warner T.A., Scott P.T., Bannam T.L., Berryman D.I., and Rood J.I. Plasmid 27 (1992) 207-219
100. Soutschek-Bauer E., Hartl L., and Staudenbauer W.L. Biotechnol. Lett. 7 (1985) 705-710
101. Squires C.H., Heefner D.L., Evans R.J., Kopp B.J., and Yarns M.J. J. Bacterial. 159 (1984) 465-471
102. Stackebrandt E., and Rainey F.A. In: Rood J.I., McClane B.A., Songer G.J., and Titball R.W. (Eds). The Clostridia, Molecular Biology and Pathogenesis (1997), Academic Press, San Diego 3-19
103. Thomas C.M., and Smith C.A. Ann. Rev. Microbiol. 41 (1987) 77-101
104. Trieu-Cuot P., Carlier C., Martin P., and Courvalin P. FEMS Microbiol. Lett. 48 (1987) 289-294
105. Trieu-Cuot P., Poyart-Salmeron C., Carlier C., and Courvalin P. Mol. Microbiol. 8 (1993) 179-185
106. Truffaut N., Hubert J., and Reysset G. FEMS Microbiol. Lett. 58 (1989) 15-19
107. van der Lelie D., and Venema G. Appl. Environ. Microbiol. 53 (1987) 2458-2463
108. Volk W.A., Bizzini B., Jones K.R., and Macrina F.L. Plasmid 19 (1988) 255-259
109. Wilkinson S.R., and Young M. Microbiology UK 140 (1994) 89-95
110. Wilkinson S.R., and Young M. J. Bacteriol. 177 (1995) 439-448
111. Wilkinson S.R., Young M., Goodacre R., Morris J.G., Farrow J.A.E., and Collins M.D. FEMS Microbiol. Lett. 125 (1995) 199-204
112. Wilkinson S.R., Young D.I., Morris J.G., and Young M. FEMS Microbiol. Rev. 17 (1995) 275-285
113. Williams D.R., Young D.I., and Young M. J. Gen. Microbiol. 136 (1990) 819-826
114. Woolley R.C., and Morris J.G. J. Appl. Bacteriol. 69 (1990) 718-728
115. Woolley R.C., Pennock A., Ashton R.J., Davies A., and Young M. Plasmid 22 (1989) 169-174
116. Yang T.T., Kain S.R., Kitts P., Kondepudi A., Yang M.M., and Youvan D.C. Gene 173 (1996) 19-23
117. Young M. In: Woods D.R. (Ed). The Clostridia and Biotechnology (1993), Butterworth, Boston 99-117
118. Young M., and Cole S.T. In: Sonenshein A.L., Hoch J.A., and Losick R. (Eds). Bacillus subtilis and other Gram-Positive Bacteria: Biochemistry, Physiology and Molecular Genetics (1993), ASM, Washington, D.C 35-52
119. Young D.I., Williams D.R., and Young M. In: Balla E., Berencsi G., and Szentirmai A. (Eds). DNA Transfer and Gene Expression in Microorganisms (1993), Intercept, Andover, U.K.
120. Youngman P.J. In: Hardy K.G. (Ed). Plasmids, a Practical Approach. (1987), IRL Press, Oxford 79-103
121. Zhou Y., and Johnson E.A. Biotechnol. Lett. 15 (1993) 121-126