메뉴 건너뛰기




Volumn 16, Issue 5, 2005, Pages 956-960

Extraction method of soil microbial DNA for molecular ecology study

Author keywords

DNA extraction; Molecular ecology; Soil microorganism

Indexed keywords

BACTERIAL DNA;

EID: 22444445618     PISSN: 10019332     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (9)

References (32)
  • 1
    • 0036204582 scopus 로고    scopus 로고
    • Microbial diversity of a heavily polluted microbial mat and its community changes following degradation of petroleum compounds
    • Abed MM, Safi MD, Koster J, et al. 2002. Microbial diversity of a heavily polluted microbial mat and its community changes following degradation of petroleum compounds. Appl Enziron Microbial, 68 (4):1674-1683
    • (2002) Appl. Environ. Microbiol. , vol.68 , Issue.4 , pp. 1674-1683
    • Abed, M.M.1    Safi, M.D.2    Koster, J.3
  • 2
    • 3142742757 scopus 로고    scopus 로고
    • Community constitute and phylogenetic analysis on soil uncultured microorganism
    • (in Chinese)
    • Chen H, Tang X-S, Lin J, et al. 2002. Community constitute and phylogenetic analysis on soil uncultured microorganism. Acta Microbiol Sin, 42 (4):478-483(in Chinese)
    • (2002) Acta Microbiol. Sin , vol.42 , Issue.4 , pp. 478-483
    • Chen, H.1    Tang, X.-S.2    Lin, J.3
  • 3
    • 0036330611 scopus 로고    scopus 로고
    • Biodiversity of denitrifying and dinitrogen-fixing bacteria in an acid forest soil
    • Christopher R, Alexander M, Hermann B. 2002. Biodiversity of denitrifying and dinitrogen-fixing bacteria in an acid forest soil. Appl Environ Microbial, 68(8):3818-3829
    • (2002) Appl. Environ. Microbiol. , vol.68 , Issue.8 , pp. 3818-3829
    • Christopher, R.1    Alexander, M.2    Hermann, B.3
  • 4
    • 0030782656 scopus 로고    scopus 로고
    • A simple, efficient method for the separation of humic substances and DNA from environmental samples
    • Colin RJ, Jennifer PH, Dacbe W, et al. 1997. A simple, efficient method for the separation of humic substances and DNA from environmental samples. Appl Environ Microbiol, 63(12): 4993-4995
    • (1997) Appl. Environ. Microbiol. , vol.63 , Issue.12 , pp. 4993-4995
    • Colin, R.J.1    Jennifer, P.H.2    Dacbe, W.3
  • 5
    • 22444431712 scopus 로고    scopus 로고
    • DNA extraction from activated sludge for molecular community analysis
    • (in Chinese)
    • Gao P-P, Zhao L-P. 2002. DNA extraction from activated sludge for molecular community analysis. Acta Ecol Sin, 22 (11):2015-2019(in Chinese)
    • (2002) Acta Ecol. Sin. , vol.22 , Issue.11 , pp. 2015-2019
    • Gao, P.-P.1    Zhao, L.-P.2
  • 6
    • 0031687820 scopus 로고    scopus 로고
    • Development of PCR primer systems for amplification of nitrite reductase genes( nirK and nirS) to detect denitrifying bacteria in environmental samples
    • Gesche B, Andreas F, Karl-Paul W. 1998. Development of PCR primer systems for amplification of nitrite reductase genes( nirK and nirS) to detect denitrifying bacteria in environmental samples. Appl Environ Microbiol, 64(10):3769-3775
    • (1998) Appl. Environ. Microbiol. , vol.64 , Issue.10 , pp. 3769-3775
    • Gesche, B.1    Andreas, F.2    Karl-Paul, W.3
  • 7
    • 0023866522 scopus 로고
    • DNA probe method for the detection of specific microorganisms in the soil bacterial community
    • Holben WE, Jansson JK, Chelm BK, et al. 1988. DNA probe method for the detection of specific microorganisms in the soil bacterial community. Appl Environ Microbiol, 54:703-711
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 703-711
    • Holben, W.E.1    Jansson, J.K.2    Chelm, B.K.3
  • 8
    • 0026764237 scopus 로고
    • Occurrence of novel groups of the domain Bacteria as revealed by analysis of genetic material isolated from an Australian terrestrial environment
    • Liesack W, Stackebrandt E. 1992. Occurrence of novel groups of the domain Bacteria as revealed by analysis of genetic material isolated from an Australian terrestrial environment. J Bacteriol, 174: 5072-5078
    • (1992) J. Bacteriol. , vol.174 , pp. 5072-5078
    • Liesack, W.1    Stackebrandt, E.2
  • 9
    • 0035289308 scopus 로고    scopus 로고
    • Microbial populations involved in cycling of dimethyl sulfide and methanethiol in freshwater sediments
    • Lomans BP, Luderer R, Peter S, et al. 2001. Microbial populations involved in cycling of dimethyl sulfide and methanethiol in freshwater sediments. Appl Environ Microbiol, 67(3):1044-1051
    • (2001) Appl. Environ. Microbiol. , vol.67 , Issue.3 , pp. 1044-1051
    • Lomans, B.P.1    Luderer, R.2    Peter, S.3
  • 10
    • 0028111397 scopus 로고
    • Purification of DNA from etuarine sediments
    • Lovell CR, Piceno Y. 1994. Purification of DNA from etuarine sediments. J Microbiol Methods, 20:161-174
    • (1994) J. Microbiol. Methods , vol.20 , pp. 161-174
    • Lovell, C.R.1    Piceno, Y.2
  • 11
    • 0028087753 scopus 로고
    • Purification and molecular analysis of microbial DNA from compost
    • Malik M, Kain J, Pettigrew C, et al. 1994. Purification and molecular analysis of microbial DNA from compost. J Microbiol Methods, 20:183-196
    • (1994) J. Microbiol. Methods , vol.20 , pp. 183-196
    • Malik, M.1    Kain, J.2    Pettigrew, C.3
  • 12
    • 0346195660 scopus 로고    scopus 로고
    • Phylogenetic diversity of nitrogenase(nifh) genes in deep-sea and hydrothermal vent environments of the Juan de Fuca Ridge
    • Mehta MP, Butterfield DA, Baross JA. 2003. Phylogenetic diversity of nitrogenase(nifh) genes in deep-sea and hydrothermal vent environments of the Juan de Fuca Ridge. Appl Environ Microbiol, 69 (2):960-970
    • (2003) Appl. Environ. Microbiol. , vol.69 , Issue.2 , pp. 960-970
    • Mehta, M.P.1    Butterfield, D.A.2    Baross, J.A.3
  • 13
    • 12744281935 scopus 로고
    • The extraction and purification of microbial DNA from sediments
    • Ograrn A, Sayler GS, Barkay T. 1987. The extraction and purification of microbial DNA from sediments. J Microbial, 7:57-66
    • (1987) J. Microbiol. , vol.7 , pp. 57-66
    • Ogram, A.1    Sayler, G.S.2    Barkay, T.3
  • 14
    • 0036946694 scopus 로고    scopus 로고
    • Molecular analysis of the nitrate-reducing community from unplanted and maize-planted soils
    • Philippot L, Piutti S, Martin LF, et al. 2002. Molecular analysis of the nitrate-reducing community from unplanted and maize-planted soils. Appl Environ Microbial, 68(12):6121-6128
    • (2002) Appl. Environ. Microbiol. , vol.68 , Issue.12 , pp. 6121-6128
    • Philippot, L.1    Piutti, S.2    Martin, L.F.3
  • 15
    • 0026745065 scopus 로고
    • Detection and enumeration of bacteria in soil by direct DNA extraction and polymerase chain reaction
    • Picard C, Ponsonnet C, Paget E, et al. 1992. Detection and enumeration of bacteria in soil by direct DNA extraction and polymerase chain reaction. Appl Environ Microbial, 58:2717-2722
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 2717-2722
    • Picard, C.1    Ponsonnet, C.2    Paget, E.3
  • 16
    • 0025740131 scopus 로고
    • Recovery of bulk DNA from soil by a rapid, small-scale extraction method
    • Porteous LA, Armstrong JL. 1991. Recovery of bulk DNA from soil by a rapid, small-scale extraction method. Curr Microbiol, 22: 345-348
    • (1991) Curr. Microbiol. , vol.22 , pp. 345-348
    • Porteous, L.A.1    Armstrong, J.L.2
  • 17
    • 0035487188 scopus 로고    scopus 로고
    • Simultaneous recovery of RNA and DNA from soils and sediments
    • Richard AH, Qju XY, Wu LY, et al. 2001. Simultaneous recovery of RNA and DNA from soils and sediments. Appl Environ Microbiol, 67(10):4495-4503
    • (2001) Appl. Environ. Microbiol. , vol.67 , Issue.10 , pp. 4495-4503
    • Richard, A.H.1    Qju, X.Y.2    Wu, L.Y.3
  • 18
    • 0027458468 scopus 로고
    • Rapid DNA extraction protocol from sod for polymerase chain reaction-mediated amplification
    • Smalla K, Cresswell N, Mendonca-Hagler LC, et al. 1993. Rapid DNA extraction protocol from sod for polymerase chain reaction-mediated amplification. Appl Environ Microbiol, 74:78-85
    • (1993) Appl. Environ. Microbiol. , vol.74 , pp. 78-85
    • Smalla, K.1    Cresswell, N.2    Mendonca-Hagler, L.C.3
  • 19
    • 0024077490 scopus 로고
    • DNA amplification to enhance detection of genetically engineered bacteria in environmental samples
    • Steffan RJ, Atlas RM. 1988. DNA amplification to enhance detection of genetically engineered bacteria in environmental samples. Appl Environ Microbiol, 54:2185-2191
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 2185-2191
    • Steffan, R.J.1    Atlas, R.M.2
  • 21
    • 0038007929 scopus 로고    scopus 로고
    • Phylogenetic diversity of microbes and its perspectives in conservation biology
    • (in Chinese)
    • Tian C-J, Chen J-K, Zhong Y. 2003. Phylogenetic diversity of microbes and its perspectives in conservation biology. Chin J Appl Ecol, 14(4):609-612 (in Chinese)
    • (2003) Chin. J. Appl. Ecol. , vol.14 , Issue.4 , pp. 609-612
    • Tian, C.-J.1    Chen, J.-K.2    Zhong, Y.3
  • 23
    • 0025903592 scopus 로고
    • Rapid method for direct extraction of DNA from soil and sediments
    • Tsai YL, Olson BH. 1991. Rapid method for direct extraction of DNA from soil and sediments. Appl Environ Microbiol, 57:1070-1074
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 1070-1074
    • Tsai, Y.L.1    Olson, B.H.2
  • 24
    • 0028935918 scopus 로고
    • Extraction and purification of PCR amplifiable DNA from lacustrine subsurface sediments
    • Vesico PA, Nierzwicki SA. 1995. Extraction and purification of PCR amplifiable DNA from lacustrine subsurface sediments. J Microbiol Methods, 21:225-233
    • (1995) J. Microbiol. Methods , vol.21 , pp. 225-233
    • Vesico, P.A.1    Nierzwicki, S.A.2
  • 25
    • 0025366456 scopus 로고
    • 16S rRNA sequences reveal numerous uncultured inhabitants in a natural community
    • Ward DM, Weller R, Bateson MM. 1990.16S rRNA sequences reveal numerous uncultured inhabitants in a natural community. Nature, 345: 63-65
    • (1990) Nature , vol.345 , pp. 63-65
    • Ward, D.M.1    Weller, R.2    Bateson, M.M.3
  • 26
    • 0026067797 scopus 로고
    • 16S Ribosomal DNA amplification for phylogenetic study
    • William GW, Susan MB, Dale AP, et al. 1991. 16S Ribosomal DNA amplification for phylogenetic study. J Bacteriol, 173 (2):697-703
    • (1991) J. Bacteriol. , vol.173 , Issue.2 , pp. 697-703
    • William, G.W.1    Susan, M.B.2    Dale, A.P.3
  • 27
    • 0037780535 scopus 로고    scopus 로고
    • Advances in extraction and purification of soil microorganism
    • (in Chinese)
    • Xiang W-S, Wu J-S, Xiao H-A, et al. 2003. Advances in extraction and purification of soil microorganism. Chin J Appl Ecol, 14 (3):453-456(in Chinese)
    • (2003) Chin. J. Appl. Ecol. , vol.14 , Issue.3 , pp. 453-456
    • Xiang, W.-S.1    Wu, J.-S.2    Xiao, H.-A.3
  • 28
    • 0030821740 scopus 로고    scopus 로고
    • PCR amplification of crude microbial DNA extracted from soil
    • Yeates C, Gillings MR, Davison AD, et al. 1997. PCR amplification of crude microbial DNA extracted from soil. Lett Appl Microbiol, 25:303-307
    • (1997) Lett. Appl. Microbiol. , vol.25 , pp. 303-307
    • Yeates, C.1    Gillings, M.R.2    Davison, A.D.3
  • 29
    • 54649084255 scopus 로고    scopus 로고
    • Methods for microbial DNA extraction from soil for PCR amplification
    • Yeates C, Gillings MR, Davision AD, et al. 1998. Methods for microbial DNA extraction from soil for PCR amplification. Biol Proced Online, 1(1):40-47
    • (1998) Biol. Proced. Online , vol.1 , Issue.1 , pp. 40-47
    • Yeates, C.1    Gillings, M.R.2    Davision, A.D.3
  • 30
    • 0037316115 scopus 로고    scopus 로고
    • Introduction and progress of molecular microbial ecology
    • (in Chinese)
    • Zhang, H-W, Zhang Q-R, Zhou Q-X, et al. 2003. Introduction and progress of molecular microbial ecology. Chin J Appl Ecol, 14 (2):286-292(in Chinese)
    • (2003) Chin. J. Appl. Ecol. , vol.14 , Issue.2 , pp. 286-292
    • Zhang, H.-W.1    Zhang, Q.-R.2    Zhou, Q.-X.3
  • 31
    • 0036210444 scopus 로고    scopus 로고
    • Molecular eoological technology of microorganisms and its application to research on environmental pollution
    • (in Chinese)
    • Zhong M, Zhou Q-X. 2002. Molecular eoological technology of microorganisms and its application to research on environmental pollution. Chin J Appl Ecol, 13 (2):247-251(in Chinese)
    • (2002) Chin. J. Appl. Ecol. , vol.13 , Issue.2 , pp. 247-251
    • Zhong, M.1    Zhou, Q.-X.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.