Construction of a micro-library enriched with genomic replication origins of carrot somatic embryos by laser microdissection

Plant Physiology and Biochemistry

Volumn 43, Issue 6, 2005, Pages 513-519

  Murata, Natsuko ^a   Masuda, Kiyoshi ^b   Nishiyama, Ryutaro ^c   Nomura, Koji ^a  

^a UNIVERSITY OF TSUKUBA   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

^c Leica Microsystems   (Japan)

Author keywords

Carrot (Daucus carota); Laser microdissection; Replication origin; Somatic embryo

Indexed keywords

ARTICLE; CARROT; CELL CULTURE; DNA REPLICATION; DNA REPLICATION ORIGIN; GENE LIBRARY; GENETICS; LASER; MICRODISSECTION; PLANT SEED; PRENATAL DEVELOPMENT;

CELLS, CULTURED; DAUCUS CAROTA; DNA REPLICATION; GENE LIBRARY; LASERS; MICRODISSECTION; REPLICATION ORIGIN; SEEDS;

DAUCUS CAROTA;

EID: 22244481013     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2005.04.004     Document Type: Article

References (23)

1. S. Amino, T. Fujimura, and A. Komajmine Synchrony induced by double phosphate starvation in suspension culture of Catharanthus roseus Physiol. Plant. 59 1983 393 396
2. F.D. Araujo, J.D. Knox, S. Ramchandani, R. Pelletier, P. Bigey, G. Price, M. Szyf, and M. Zannis Hadjopoulos Identification of initiation sites for DNA replication in the human dnmt1 (DNA-methyltransferase) locus J. Biol. Chem. 274 1999 9335 9341
3. M.C. de Vicente, and S.D. Tanksley QTL analysis of transgressive segregation in an interspecific tomato cross Genetics 134 1993 585 596
4. D. Dimitrova, L. Vassilev, B. Anachkova, and G. Russev Isolation and cloning of putative mouse DNA replication initiation sites: binding to nuclear protein factors Nucleic Acids Res. 21 1993 5554 5560
5. M.P. Francino, and H. Ochman Strand symmetry around the β-globin origin of replication in primates Mol. Biol. Evol. 17 2000 416 422
6. P. Fransz, C. Alonsoblanco, T.B. Liharska, A.J.M. Peeters, P. Zabel, and J.H. de Jong High resolution physical mapping in Arabidopsis thaliana, tomato by fluorescence in situ hybridization to extended DNA fibers Plant J. 9 1996 421 430
7. K. Fukui, M. Minezawa, Y. Kamisugi, N. Ohmido, M. Ishikawa, T. Yanagisawa, M. Fujishita, and F. Sakai Microdissection of plant chromosomes by argon ion laser beam Theor. Appl. Genet. 84 1992 787 791
8. K. Fukui, Y. Kamisugi, and F. Sakai Physical mapping of 5S RNA loci by direct-cloned biotinylated probes in barley chromosomes Genome 37 1994 105 111
9. T. Fujimura, and A. Komamine Effects of various growth regulators on the embryogenesis in a carrot cell suspension culture Plant Sci. Lett. 5 1975 359 364
10. T. Fujimura, and A. Komamine The serial observation of embryogenesis in a carrot cell suspension culture New Phytol. 86 1980 213 218
11. Y. Kamisugi, F. Sakai, M. Minezawa, M. Fujishita, and K. Fukui Recovery of the dissected C-banded regions in Crepis chromosomes Theor. Appl. Genet. 85 1993 825 828
12. A. Komamine, N. Murata, and K. Nomura Mechanisms of somatic embryogenesis in carrot suspension cultures - morphology, physiology, biochemistry and molecular biology In Vitro Cell. Dev. Biol.-Plant 46 2005 6 10
13. S.A. Jackson, M.L. Wang, H.G. Goodman, and J. Jiang Application of fiber-FISH in physical mapping of Arabidopsis thaliana Genome 41 1998 566 572
14. M. Lin, and J. Staba Peppermint and spearmint tissue cultures. I. Callus formation and submerged culture Lloydia 24 1961 139 125
15. K. Masuda, S. Takahashi, K. Nomura, and M. Inoue A simple procedure for the isolation of pure nuclei from carrot embryos in synchronized cultures Plant Cell Rep. 10 1991 329 333
16. M. Meselson, and F.W. Stahl The replication of DNA in Escherichia coli Proc. Natl. Acad. Sci. USA 44 1958 671 682
17. T. Nishida, N. Ohnishi, H. Kodama, and A. Komamine Establishment of synchrony by starvation and readdition of auxin in suspension culture of Catharanthus roseus cells Plant Cell Tissue Organ Cult. 28 1992 37 43
18. T. Nitta, and T. Nagata DNA fiber autoradiography of tobacco mesophyll protoplasts Chromosoma 59 1976 83 88
19. A.H. Quelo, and J.P. Verbelen Bromodeoxyuridine DNA fiber technology in plants: replication origins and DNA synthesis in tobacco BY-2 cells under prolonged treatment with aphidicolin Protoplasma 223 2004 197 202
20. S. Takebayashi, E.M.M. Manders, H. Kimura, H. Taguchi, and K. Okumura Mapping site where replication ititiates in mammalian cells using DNA fibers Exp. Cell Res. 271 2001 263 268
21. H. Telenius, N.P. Carter, C.E. Bebb, M. Nordenskjold, B.A. Ponder, and A. Tunnacliffe Degenerate oliconucleotide primed PCR: general amplification of target DNA by a single degenerate primer Genomics 13 1992 718 725
22. C. Tribioli, G. Biamonti, M. Giacca, M. Colonna, S. Riva, and A. Falaschi Characterization of human DNA sequences synthesized at the onset of S-phase Nucleic Acids Res. 15 1987 10211 10232
23. J. Yamamura, and K. Nomura Analysis of sequence-dependent curvature in matrix attachment regions FEBS Lett. 489 2001 166 170