-
1
-
-
0036743258
-
Diversity of grass-associated Microbacteriaceae isolated from the phyllosphere and litter layer after mulching the sward polyphasic characterization of Subtercola pratensis sp. nov., Curtobacterium herbarum sp. nov. and Plantibacter flavus gen. nov., sp. nov.
-
U. Behrendt, A. Ulrich, P. Schumann, D. Naumann, and K. Suzuki Diversity of grass-associated Microbacteriaceae isolated from the phyllosphere and litter layer after mulching the sward polyphasic characterization of Subtercola pratensis sp. nov., Curtobacterium herbarum sp. nov. and Plantibacter flavus gen. nov., sp. nov. Int. J. Syst. Evol. Microbiol. 52 2002 1441 1454
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 1441-1454
-
-
Behrendt, U.1
Ulrich, A.2
Schumann, P.3
Naumann, D.4
Suzuki, K.5
-
2
-
-
0037251969
-
The Ribosomal Database Project (RDP-II): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
J.R. Cole, B. Chai, T.L. Marsh, R.J. Farris, Q. Wang, S.A. Kulam, S. Chandra, D.M. McGarrell, T.M. Schmidt, G.M. Garrity, and J.M. Tiedje The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy Nucl. Acids Res. 31 2003 442 443
-
(2003)
Nucl. Acids Res.
, vol.31
, pp. 442-443
-
-
Cole, J.R.1
Chai, B.2
Marsh, T.L.3
Farris, R.J.4
Wang, Q.5
Kulam, S.A.6
Chandra, S.7
McGarrell, D.M.8
Schmidt, T.M.9
Garrity, G.M.10
Tiedje, J.M.11
-
3
-
-
0035200742
-
Agreia bicolorata gen nov., sp. nov., to accommodate actinobacteria isolated from narrow reed grass infected by the nematode Heteroanguina graminophila
-
L.I. Evtushenko, L.V. Dorofeeva, T.G. Dobrovolskaya, G.M. Streshinskaya, S.A. Subbotin, and J.M. Tiedie Agreia bicolorata gen nov., sp. nov., to accommodate actinobacteria isolated from narrow reed grass infected by the nematode Heteroanguina graminophila Int. J. Syst. Evol. Microbiol. 51 2001 2073 2079
-
(2001)
Int. J. Syst. Evol. Microbiol.
, vol.51
, pp. 2073-2079
-
-
Evtushenko, L.I.1
Dorofeeva, L.V.2
Dobrovolskaya, T.G.3
Streshinskaya, G.M.4
Subbotin, S.A.5
Tiedie, J.M.6
-
4
-
-
0035989609
-
Okibacterium fritillariae gen. nov., sp. nov., a novel genus of the family Microbacteriaceae
-
L.I. Evtushenko, L.V. Dorofeeva, V.I. Krausova, E.Y. Gavrish, S.G. Yashina, and M. Takeuchi Okibacterium fritillariae gen. nov., sp. nov., a novel genus of the family Microbacteriaceae Int. J. Syst. Evol. Microbiol. 52 2002 987 993
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 987-993
-
-
Evtushenko, L.I.1
Dorofeeva, L.V.2
Krausova, V.I.3
Gavrish, E.Y.4
Yashina, S.G.5
Takeuchi, M.6
-
5
-
-
0033976024
-
Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov.nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov.
-
L.I. Evtushenko, L.V. Dorofeeva, S.A. Subbotin, J.R. Cole, and J.M. Tiedje Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov..nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 50 2000 371 380
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 371-380
-
-
Evtushenko, L.I.1
Dorofeeva, L.V.2
Subbotin, S.A.3
Cole, J.R.4
Tiedje, J.M.5
-
6
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
J. Felsenstein Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 1985 783 791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
7
-
-
77956986901
-
Preparation of buffers
-
G. Gomori Preparation of buffers Methods Enzymol. 1 1955 138 146
-
(1955)
Methods Enzymol.
, vol.1
, pp. 138-146
-
-
Gomori, G.1
-
8
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
T.A. Hall BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucl. Acids. Symp. Ser. 41 1999 95 98
-
(1999)
Nucl. Acids. Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
9
-
-
0344033924
-
Salinibacterium amurskyense gen. nov., sp. nov., a novel genus of the family Microbacteriaceae from the marine environment
-
S.K. Han, O.I. Nedashkovskaya, V.V. Mikhailov, and S.B. Kim Salinibacterium amurskyense gen. nov., sp. nov., a novel genus of the family Microbacteriaceae from the marine environment Int. J. Syst. Evol. Microbiol. 53 2003 2061 2066
-
(2003)
Int. J. Syst. Evol. Microbiol.
, vol.53
, pp. 2061-2066
-
-
Han, S.K.1
Nedashkovskaya, O.I.2
Mikhailov, V.V.3
Kim, S.B.4
-
10
-
-
84939587281
-
-
http://www.dsmz.de/species/murein.htm
-
-
-
-
12
-
-
0000486502
-
Alkaliphiles: Diversity and identification
-
F.G. Priest Plenum Press New York, NY*et al.
-
E.B. Jones, W.D. Grant, N.C. Collins, and W.E. Mwatha Alkaliphiles: diversity and identification F.G. Priest Bacterial Diversity and Systematics 1994 Plenum Press New York, NY 195 230
-
(1994)
Bacterial Diversity and Systematics
, pp. 195-230
-
-
Jones, E.B.1
Grant, W.D.2
Collins, N.C.3
Mwatha, W.E.4
-
13
-
-
0000732090
-
Evolution of protein molecules
-
H.N. Munro Academic Press New York
-
T.H. Jukes, and C.R. Cantor Evolution of protein molecules H.N. Munro Mammalian Protein Metabolism 1969 Academic Press New York 21 132
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
14
-
-
4243573770
-
Frigoribacterium faeni gen. nov., sp. nov., a novel psychrophilic genus of the family Microbacteriaceae
-
P. Kämpfer, F.A. Rainey, M.A. Andersson, E.-L. Nurmiaho Lassila, U. Ulrych, H.-J. Busse, N. Weiss, R. Mikkola, and M. Salkinoja-Salonen Frigoribacterium faeni gen. nov., sp. nov., a novel psychrophilic genus of the family Microbacteriaceae Int. J. Syst. Evol. Microbiol. 50 2000 355 363
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 355-363
-
-
Kämpfer, P.1
Rainey, F.A.2
Andersson, M.A.3
Nurmiaho Lassila, E.-L.4
Ulrych, U.5
Busse, H.-J.6
Weiss, N.7
Mikkola, R.8
Salkinoja-Salonen, M.9
-
15
-
-
0036139211
-
MEGA2: Molecular Evolutionary Genetics Analysis software
-
S. Kumar, K. Tamura, I.B. Jakobsen, and M. Nei MEGA2: Molecular Evolutionary Genetics Analysis software Bioinformatics 17 12 2001 1244 1245
-
(2001)
Bioinformatics
, vol.17
, Issue.12
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
16
-
-
5444225343
-
Zimmermannella helvola gen. nov., sp. nov., Zimmermannella alba sp. nov., Zimmermannella bifida sp. nov., Zimmermannella faecalis sp. nov. and Leucobacter albus sp. nov., novel members of the family Microbacteriaceae
-
Y.C. Lin, K. Uemori, D.A. de Briel, V. Arunpairojana, and A. Yokota Zimmermannella helvola gen. nov., sp. nov., Zimmermannella alba sp. nov., Zimmermannella bifida sp. nov., Zimmermannella faecalis sp. nov. and Leucobacter albus sp. nov., novel members of the family Microbacteriaceae Int. J. Syst. Evol. Microbiol. 54 2004 1669 1676
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 1669-1676
-
-
Lin, Y.C.1
Uemori, K.2
De Briel, D.A.3
Arunpairojana, V.4
Yokota, A.5
-
17
-
-
2942631116
-
Gulosibacter molinativorax gen. nov., sp. nov., a molinate-degrading bacterium, and classification of 'Brevibacterium helvolum' DSM 20419 as Pseudoclavibacter helvolus gen. nov., sp. Nov
-
C.M. Manaia, B. Nogales, N. Weiss, and O.C. Nunes Gulosibacter molinativorax gen. nov., sp. nov., a molinate-degrading bacterium, and classification of 'Brevibacterium helvolum' DSM 20419 as Pseudoclavibacter helvolus gen. nov., sp. Nov Int. J. Syst. Evol. Microbiol. 54 2004 783 789
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 783-789
-
-
Manaia, C.M.1
Nogales, B.2
Weiss, N.3
Nunes, O.C.4
-
18
-
-
0033803698
-
Subtercola boreus gen. nov., sp. nov. and Subtercola frigoramans sp. nov., two new psychrophilic actinobacteria isolated from boreal groundwater
-
M.K. Männistö, P. Schumann, F.A. Rainey, P. Kämpfer, I. Tsitko, M.A. Tiirola, and M.S. Salkinoja-Salonen Subtercola boreus gen. nov., sp. nov. and Subtercola frigoramans sp. nov., two new psychrophilic actinobacteria isolated from boreal groundwater Int J. Syst. Evol. Microbiol. 20 2000 1731 1739
-
(2000)
Int J. Syst. Evol. Microbiol.
, vol.20
, pp. 1731-1739
-
-
Männistö, M.K.1
Schumann, P.2
Rainey, F.A.3
Kämpfer, P.4
Tsitko, I.5
Tiirola, M.A.6
Salkinoja-Salonen, M.S.7
-
19
-
-
0000198211
-
Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography
-
M. Mesbah, U. Premachandran, and W. Whitman Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography Int. J. Syst. Bacteriol. 39 1989 159 167
-
(1989)
Int. J. Syst. Bacteriol.
, vol.39
, pp. 159-167
-
-
Mesbah, M.1
Premachandran, U.2
Whitman, W.3
-
20
-
-
0029095996
-
Phenetic diversity of alkaliphilic Bacillus strains: Proposal for nine new species
-
P. Nielsen, D. Fritze, and F.G. Priest Phenetic diversity of alkaliphilic Bacillus strains: proposal for nine new species Microbiology 141 1995 1745 1761
-
(1995)
Microbiology
, vol.141
, pp. 1745-1761
-
-
Nielsen, P.1
Fritze, D.2
Priest, F.G.3
-
21
-
-
0027893080
-
Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA
-
Y.-H. Park, K. Suzuki, and D.G. Yim Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA Anton. van Leeuw. 64 1993 307 313
-
(1993)
Anton. Van Leeuw.
, vol.64
, pp. 307-313
-
-
Park, Y.-H.1
Suzuki, K.2
Yim, D.G.3
-
22
-
-
0029799968
-
The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: Proposal of Nocardiopsaceae fam. nov.
-
F.A. Rainey, N. Ward-Rainey, R.M. Kroppenstedt, and E. Stackebrandt The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int. J. Syst. Bacteriol. 46 1996 1088 1092
-
(1996)
Int. J. Syst. Bacteriol.
, vol.46
, pp. 1088-1092
-
-
Rainey, F.A.1
Ward-Rainey, N.2
Kroppenstedt, R.M.3
Stackebrandt, E.4
-
23
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
N. Saitou, and M. Nei The neighbor-joining method: A new method for reconstructing phylogenetic trees Molecular Biol. Evol. 4 1987 406 425
-
(1987)
Molecular Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
24
-
-
0000943532
-
Analysis of the chemical composition and primary structure of murein
-
K.H. Schleifer Analysis of the chemical composition and primary structure of murein Methods Microbiol. 18 1985 123 156
-
(1985)
Methods Microbiol.
, vol.18
, pp. 123-156
-
-
Schleifer, K.H.1
-
25
-
-
0015462556
-
Peptidoglycan types of bacterial cell walls and their taxonomic implicationsm
-
K.H. Schleifer, and O. Kandler Peptidoglycan types of bacterial cell walls and their taxonomic implicationsm Bacteriol. Rev. 36 1972 407 477
-
(1972)
Bacteriol. Rev.
, vol.36
, pp. 407-477
-
-
Schleifer, K.H.1
Kandler, O.2
-
26
-
-
0042812272
-
Rhodoglobus vestalii gen. nov., sp. nov., a novel psychrophilic organism isolated from an Antarctic Dry Valley lake
-
P.P. Sheridan, J. Loveland-Curtze, V.I. Miteva, and J.E. Brenchley Rhodoglobus vestalii gen. nov., sp. nov., a novel psychrophilic organism isolated from an Antarctic Dry Valley lake Int. J. Syst. Evol. Microbiol. 53 2003 985 994
-
(2003)
Int. J. Syst. Evol. Microbiol.
, vol.53
, pp. 985-994
-
-
Sheridan, P.P.1
Loveland-Curtze, J.2
Miteva, V.I.3
Brenchley, J.E.4
-
27
-
-
0000221252
-
General characterization
-
P. Gerhardt R.G.E. Murray R.N. Costilow E.W. Nester W.A. Wood N.R. Krieg G.B. Phillips American Society for Microbiology Washington, DC
-
R.M. Smibert, and N.R. Krieg General characterization P. Gerhardt R.G.E. Murray R.N. Costilow E.W. Nester W.A. Wood N.R. Krieg G.B. Phillips Manual of Methods for General Bacteriology 1981 American Society for Microbiology Washington, DC 411 442
-
(1981)
Manual of Methods for General Bacteriology
, pp. 411-442
-
-
Smibert, R.M.1
Krieg, N.R.2
-
28
-
-
0030893495
-
Proposal for a new hierarchic classification system, Actinobacteria classis nov
-
E. Stackebrandt, F.A. Rainey, and N.L. Ward-Rainey Proposal for a new hierarchic classification system, Actinobacteria classis nov Int. J. Syst. Bacteriol. 47 1997 479 491
-
(1997)
Int. J. Syst. Bacteriol.
, vol.47
, pp. 479-491
-
-
Stackebrandt, E.1
Rainey, F.A.2
Ward-Rainey, N.L.3
-
29
-
-
0030892019
-
Cryobacterium psychrophilum gen. nov., sp. nov., nom. rev., comb. nov., an obligately psychrophilic actinomycete to accommodate "curtobacterium psychrophilum" Inoue and Komagata 1976
-
K. Suzuki, J. Sasaki, M. Uramoto, T. Nakase, and K. Komagata Cryobacterium psychrophilum gen. nov., sp. nov., nom. rev., comb. nov., an obligately psychrophilic actinomycete to accommodate "Curtobacterium psychrophilum" Inoue and Komagata 1976 Int. J. Syst. Bacteriol. 47 1997 474 478
-
(1997)
Int. J. Syst. Bacteriol.
, vol.47
, pp. 474-478
-
-
Suzuki, K.1
Sasaki, J.2
Uramoto, M.3
Nakase, T.4
Komagata, K.5
-
30
-
-
0029846981
-
Leucobacter komagatae gen. nov., sp. nov., a new aerobic Gram-positive nonsporulating rod with 2,4-diaminobutyric acid in the cell wall
-
M. Takeuchi, N. Weiss, P. Schumann, and A. Yokota Leucobacter komagatae gen. nov., sp. nov., a new aerobic Gram-positive nonsporulating rod with 2,4-diaminobutyric acid in the cell wall Int. J. Syst. Bacteriol. 46 1996 967 971
-
(1996)
Int. J. Syst. Bacteriol.
, vol.46
, pp. 967-971
-
-
Takeuchi, M.1
Weiss, N.2
Schumann, P.3
Yokota, A.4
-
31
-
-
0031574072
-
The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
J.D. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucl. Acids Res. 24 1997 4876 4882
-
(1997)
Nucl. Acids Res.
, vol.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
32
-
-
10444276630
-
Bacterial diversity in a nonsaline alkaline environment: Heterotrophic aerobic populations
-
I. Tiago, A. Chung, and A. Veríssimo Bacterial diversity in a nonsaline alkaline environment: heterotrophic aerobic populations Appl. Environ. Microbiol. 70 2004 7378 7387
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 7378-7387
-
-
Tiago, I.1
Chung, A.2
Veríssimo, A.3
-
33
-
-
0000071941
-
Fully saturated menaquinones in the archaebacterium Pyrobaculum islandicum
-
B.J. Tindall Fully saturated menaquinones in the archaebacterium Pyrobaculum islandicum FEMS Microbiol. Lett. 60 1989 251 254
-
(1989)
FEMS Microbiol. Lett.
, vol.60
, pp. 251-254
-
-
Tindall, B.J.1
-
34
-
-
0034980624
-
Proposal of Mycetocola gen. nov. in the family Microbacteriaceae and three new species, Mycetocola saprophilus sp. nov., Mycetocola tolaasinivorans sp. nov. and Mycetocola lacteus sp. nov., isolated from cultivated mushroom, Pleurotus ostreatus
-
T. Tsukamoto, M. Takeuchi, O. Shida, H. Murata, and A. Shirata Proposal of Mycetocola gen. nov. in the family Microbacteriaceae and three new species, Mycetocola saprophilus sp. nov., Mycetocola tolaasinivorans sp. nov. and Mycetocola lacteus sp. nov., isolated from cultivated mushroom, Pleurotus ostreatus Int. J. Syst. Evol. Microbiol. 51 2001 937 944
-
(2001)
Int. J. Syst. Evol. Microbiol.
, vol.51
, pp. 937-944
-
-
Tsukamoto, T.1
Takeuchi, M.2
Shida, O.3
Murata, H.4
Shirata, A.5
|