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Volumn 67, Issue 6, 2005, Pages 795-806

A novel actinomycete strain de-replication approach based on the diversity of polyketide synthase and nonribosomal peptide synthetase biosynthetic pathways

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; BIOSYNTHESIS; METABOLITES; POLYPEPTIDES; STRAIN;

EID: 21344453076     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-004-1828-7     Document Type: Article
Times cited : (52)

References (30)
  • 2
    • 0004830669 scopus 로고    scopus 로고
    • Polyketide antibiotics
    • Lederberg J (ed) Academic, San Diego
    • Anderson AS, An Z, Strohl WR (2000) Polyketide antibiotics. In: Lederberg J (ed) Encyclopedia for microbiology, vol 3. Academic, San Diego, pp 241-254
    • (2000) Encyclopedia for Microbiology , vol.3 , pp. 241-254
    • Anderson, A.S.1    An, Z.2    Strohl, W.R.3
  • 4
    • 0036693291 scopus 로고    scopus 로고
    • The detection of diverse aminoglycoside phosphotransferases within natural populations of actinomycetes
    • Anderson AS, Clark D, Gibbons P, Sigmund J (2002) The detection of diverse aminoglycoside phosphotransferases within natural populations of actinomycetes. J Ind Microbiol Biotechnol 29:60-69
    • (2002) J Ind Microbiol Biotechnol , vol.29 , pp. 60-69
    • Anderson, A.S.1    Clark, D.2    Gibbons, P.3    Sigmund, J.4
  • 5
    • 21344432276 scopus 로고    scopus 로고
    • New molecular tools for the screening of NRPS and PKS-I systems in actinomycetes: Detection and distribution in major taxonomic groups
    • in press
    • Ayuso A, Genilloud O (2004) New molecular tools for the screening of NRPS and PKS-I systems in actinomycetes: detection and distribution in major taxonomic groups. Microb Ecol (in press)
    • (2004) Microb Ecol
    • Ayuso, A.1    Genilloud, O.2
  • 6
    • 0344034163 scopus 로고    scopus 로고
    • Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S rRNA gene restriction fragment patterns
    • Cook AE, Meyers PR (2003) Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S rRNA gene restriction fragment patterns. Int J Syst Evol Microbiol 53:1907-1915
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1907-1915
    • Cook, A.E.1    Meyers, P.R.2
  • 7
    • 0345492332 scopus 로고    scopus 로고
    • Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species
    • Challis GL, Hopwood DA (2003) Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species. Proc Natl Acad Sci USA 100:14555-14561
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 14555-14561
    • Challis, G.L.1    Hopwood, D.A.2
  • 8
    • 0033757122 scopus 로고    scopus 로고
    • Enhanced production of microbial metabolites in the presence of dimethyl sulfoxide
    • Chen G, Wang GY, Li X, Waters B, Davies J (2000) Enhanced production of microbial metabolites in the presence of dimethyl sulfoxide. J Antibiot 53:1145-1153
    • (2000) J Antibiot , vol.53 , pp. 1145-1153
    • Chen, G.1    Wang, G.Y.2    Li, X.3    Waters, B.4    Davies, J.5
  • 9
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368-376
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 10
    • 0029037971 scopus 로고
    • Use of polymerase chain reaction (PCR) fingerprinting to differentiate bacteria for microbial products screening
    • Hirsch CF, Sigmund JM (1995) Use of polymerase chain reaction (PCR) fingerprinting to differentiate bacteria for microbial products screening. J Indust Microbiol 15:85-93
    • (1995) J Indust Microbiol , vol.15 , pp. 85-93
    • Hirsch, C.F.1    Sigmund, J.M.2
  • 11
    • 0037657945 scopus 로고    scopus 로고
    • The Streptomyces genome - Be prepared!
    • Hopwood DA (2003) The Streptomyces genome - be prepared! Nat Biotechnol 21:505-506
    • (2003) Nat Biotechnol , vol.21 , pp. 505-506
    • Hopwood, D.A.1
  • 13
    • 0035432220 scopus 로고    scopus 로고
    • Optimization of annealing temperature to reduce bias caused by a primer mismatch in multitemplate PCR
    • Ishii K, Fukui M (2001) Optimization of annealing temperature to reduce bias caused by a primer mismatch in multitemplate PCR. Appl Environ Microbiol 67:3753-3755
    • (2001) Appl Environ Microbiol , vol.67 , pp. 3753-3755
    • Ishii, K.1    Fukui, M.2
  • 14
    • 0027461618 scopus 로고
    • Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms
    • Jensen MA, Webster JA, Straus N (1993) Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms. Appl Environ Microbiol 59:945-952
    • (1993) Appl Environ Microbiol , vol.59 , pp. 945-952
    • Jensen, M.A.1    Webster, J.A.2    Straus, N.3
  • 16
    • 0026667294 scopus 로고
    • Complex organization of the Streptomyces avermitilis genes encoding the avermectin polyketide synthase
    • MacNeil DJ, Occi JL, Gewain KM, MacNeil T, Gibbons PH, Ruby CL, Danis SJ (1992) Complex organization of the Streptomyces avermitilis genes encoding the avermectin polyketide synthase. Gene 115:119-125
    • (1992) Gene , vol.115 , pp. 119-125
    • MacNeil, D.J.1    Occi, J.L.2    Gewain, K.M.3    MacNeil, T.4    Gibbons, P.H.5    Ruby, C.L.6    Danis, S.J.7
  • 18
    • 0036731845 scopus 로고    scopus 로고
    • Molecular evolution of aromatic polyketides and comparative sequence analysis of polyketide ketosynthase and 16s ribosomal dna genes from various Streptomyces species
    • Metsa-Ketela M, Halo L, Munukka E, Hakala J, Mantsala P, Ylihonko K (2002) Molecular evolution of aromatic polyketides and comparative sequence analysis of polyketide ketosynthase and 16s ribosomal dna genes from various Streptomyces species. Appl Environ Microbiol 68:4472-4479
    • (2002) Appl Environ Microbiol , vol.68 , pp. 4472-4479
    • Metsa-Ketela, M.1    Halo, L.2    Munukka, E.3    Hakala, J.4    Mantsala, P.5    Ylihonko, K.6
  • 20
    • 21344458280 scopus 로고    scopus 로고
    • Discovering new drugs from microbial natural products
    • Barredo J-L (ed) Research Signpost, Trivandrum
    • Peláez F, Genilloud O (2003) Discovering new drugs from microbial natural products. In: Barredo J-L (ed) Microorganisms for health care, food and enzyme production. Research Signpost, Trivandrum, pp 1-23
    • (2003) Microorganisms for Health Care, Food and Enzyme Production , pp. 1-23
    • Peláez, F.1    Genilloud, O.2
  • 21
  • 22
    • 0141817771 scopus 로고    scopus 로고
    • Dereplication of Streptomyces soil isolates and detection of specific biosynthetic genes using an automated ribotyping instrument
    • Ritacco FV, Haltli B, Janson JE, Greenstein M, Bernan VS (2003) Dereplication of Streptomyces soil isolates and detection of specific biosynthetic genes using an automated ribotyping instrument. J Ind Microbiol Biotechnol 30:472-479
    • (2003) J Ind Microbiol Biotechnol , vol.30 , pp. 472-479
    • Ritacco, F.V.1    Haltli, B.2    Janson, J.E.3    Greenstein, M.4    Bernan, V.S.5
  • 24
    • 0041784583 scopus 로고    scopus 로고
    • Detection of eubacterial 3-hydroxy-3-methylglutaryl coenzyme a reductases from natural populations of actinomycetes
    • Sigmund JM, Clark DJ, Rainey FA, Anderson AS (2003) Detection of eubacterial 3-hydroxy-3-methylglutaryl coenzyme A reductases from natural populations of actinomycetes. Microb Ecol 46:106-112
    • (2003) Microb Ecol , vol.46 , pp. 106-112
    • Sigmund, J.M.1    Clark, D.J.2    Rainey, F.A.3    Anderson, A.S.4
  • 25
    • 0033757481 scopus 로고    scopus 로고
    • Multiple peptide synthase gene clusters in actinomycetes
    • Sosio M, Bossi E, Bianchi A, Donadio S (2000) Multiple peptide synthase gene clusters in actinomycetes. Mol Gen Genet 264:213-221
    • (2000) Mol Gen Genet , vol.264 , pp. 213-221
    • Sosio, M.1    Bossi, E.2    Bianchi, A.3    Donadio, S.4
  • 27
    • 0030067991 scopus 로고    scopus 로고
    • Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
    • Suzuki MT, Giovannoni SJ (1996) Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol 62:625-630
    • (1996) Appl Environ Microbiol , vol.62 , pp. 625-630
    • Suzuki, M.T.1    Giovannoni, S.J.2
  • 28
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 29
    • 0026018982 scopus 로고
    • Genomic fingerprints produced by PCR with consensus tRNA gene primers
    • Welsh J, McClelland M (1991) Genomic fingerprints produced by PCR with consensus tRNA gene primers. Nucleic Acids Res 19:861-866
    • (1991) Nucleic Acids Res , vol.19 , pp. 861-866
    • Welsh, J.1    McClelland, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.