Mapping brains without coordinates

Philosophical Transactions of the Royal Society B: Biological Sciences

Volumn 360, Issue 1456, 2005, Pages 751-766

  Kötter, Rolf ^a   Wanke, Egon ^a  

^a HEINRICH HEINE UNIVERSITY   (Germany)

Author keywords

Brain atlas; Cerebral cortex; Localization; Ontology; Primate; Spatial normalization

Indexed keywords

BRAIN; PRIMATE;

PRIMATES;

EID: 21244478632     PISSN: 09628436     EISSN: None     Source Type: Journal    
DOI: 10.1098/rstb.2005.1625     Document Type: Article

References (75)

1. Amunts, K., Malikovic, A., Mohlberg, H., Schormann, T. & Zilles, K. 2000 Brodmann's areas 17 and 18 brought into stereotaxic space - where and how variable? NeuroImage 11, 66-84. (doi:10.1006/nimg.1999.0516.)
2. Ashburner, J. & Friston, K. J. 2000 Voxel-based morphometry - the methods. NeuroImage 11, 805-821.
3. Barbas, H. 1988 Anatomic organization of basoventral and mediodorsal visual recipient prefrontal regions in the rhesus monkey. J. Comp. Neurol. 276, 313-342.
4. Barbas, H. & Pandya, D. N. 1987 Architecture and frontal cortical connections of the premotor cortex (area 6) in the Rhesus monkey. J. Comp. Neurol. 256, 211-228.
5. Barnes, C. L. & Pandya, D. N. 1992 Efferent cortical connections of multimodal cortex of the superior temporal sulcus in the rhesus monkey. J. Comp. Neurol. 318, 222-244.
6. Bota, M. & Arbib, M. A. 2004 Integrating databases and expert systems for the analysis of brain structures: connections, similarities, and homologies. Neuroinformatics 2, 19-58.
7. Boussaoud, D., Desimone, R. & Ungerleider, L. G. 1991 Visual topography of area TEO in the macaque. J. Comp. Neurol. 306, 554-575.
8. Bowden, D. M. & Dubach, M. 2003 Neuronames 2002. Neuroinformatics 1, 43-60.
9. Brett, M., Johnsrude, I. S. & Owen, A. S. 2002 The problem of functional localization in the human brain. Nat. Rev. Neurosci. 3, 243-249.
10. Brodmann, K. 1903 Beiträge zur histologischen Lokalisation der Großhirnrinde. I. Mitteilung: Die Regio Rolandica. J. Psychol. Neurol. 2, 79-107.
11. Brodmann, K. 1905 Beiträge zur histologischen Lokalisation der Großhirnrinde. III. Mitteilung: Die Rindenfelder der niederen Affen. J. Psychol. Neurol. 4, 177-226.
12. Brodmann, K. 1909 Vergleichende Lokalisationslehre der Großhirnrinde in ihren Prinzipien dargestellt auf Grund des Zellenbaues. Leipzig: Barth.
13. Campbell, W. W. 1905 Histological studies on the localisation of cerebral function. Cambridge: Cambridge University Press.
14. Crespo-Facorro, B., Kim, J., Andreasen, N. C., Spinks, R., O'Leary, D. S., Bockholt, H. J., Harris, G. & Magnotta, V. A. 2000 Cerebral cortex: a topographic segmentation method using magnetic resonance imaging. Psychiatry Res. 100, 97-126.
15. Cusick, C. G., Seltzer, B., Cola, M. & Griggs, E. 1995 Chemoarchitectonics and corticocortical terminations within the superior temporal sulcus of the rhesus monkey: evidence for subdivisions of superior temporal polysensory cortex. J. Comp. Neurol. 360, 513-535.
16. Desimone, R. & Ungerleider, L. G. 1986 Multiple visual areas in the caudal superior temporal sulcus of the macaque. J. Comp. Neurol. 248, 164-189.
17. Duong, T. Q., Kim, D. S., Ugurbil, K. & Kim, S. G. 2001 Localized cerebral blood flow response at submillimeter columnar resolution. Proc. Natl Acad. Sci. USA 98, 10 904-10 909.
18. Eickhoff, S., Walters, N. B., Schleicher, A., Kril, J., Egan, G. F., Zilles, K., Watson, J. D. & Amunts, K. 2004 High-resolution MRI reflects myeloarchitecture and cytoarchitecture of human cerebral cortex. Hum. Brain Mapp. 24, 206-215 (ePublication ahead of print).
19. Eickhoff, S. B., Stephan, K. E., Mohlberg, H., Grefkes, C., Fink, G. R., Amunts, K. & Zilles, K. In press. A new SPM toolbox for combining probabilistic cytoarchitectonic maps and functional imaging data. NeuroImage.
20. Felleman, D. J. & Van Essen, D. C. 1991 Distributed hierarchical processing in the primate cerebral cortex. Cereb. Cortex 1, 1-47.
21. Galletti, C., Gamberini, M., Kutz, D. F., Baldinotti, I. & Fattori, P. In press. The relationship between V6 and PO in macaque extrastriate cortex. Eur. J. Neurosci.
22. Gaser, C. & Schlaug, G. 2003 Brain structures differ between musicians and non-musicians. J. Neurosci. 23, 9240-9245.
23. Gattass, R. & Gross, C. G. 1981 Visual topography of striate projection zone (MT) in posterior superior temporal sulcus of the macaque. J. Neurophysiol. 46, 621-638.
24. Geyer, S., Schormann, T., Mohlberg, H. & Zilles, K. 2000 Areas 3a, 3b, and 1 of human primary somatosensory cortex. Part 2. Spatial normalization to standard anatomical space. NeuroImage, 11, 684-696. (doi:10.1006/nimg. 2000.0548.)
25. Gorin, F., Hogarth, M. & Gertz, M. 2001 The challenges and rewards of integrating diverse neuroscience information. Neuroscientist 7, 18-27.
26. Hof, P. R. & Morrison, J. H. 1995 Neurofilament protein defines regional patterns of cortical organization in the macaque monkey visual system: a quantitative immunohistochemical analysis. J. Comp. Neurol. 352, 161-186.
27. Huk, A. C., Dougherty, R. F. & Heeger, D. J. 2002 Retinotopy and functional subdivision of human areas MT and MST. J. Neurosci. 22 7195-7205.
28. Johansen-Berg, H., Behrens, T. E., Sillery, E., Ciccarelli, O., Thompson, A. J., Smith, S. M. & Matthews, P. M. 2004 Functional-anatomical validation and individual variation of diffusion tractography-based segmentation of the human thalamus. Cereb. Cortex 15, 31-39. (doi:10.1093/cercor/bhh105.)
29. Koslow, S. H. & Hirsch, M. D. 2004 Celebrating a decade of neuroscience databases. Looking to the future of high-throughput data analysis, data integration, and discovery neuroscience. Neuroinformatics 2, 267-269.
30. Kötter, R. 2004 Online retrieval, processing, and visualization of primate connectivity data from the CoCoMac database. Neuroinformatics 2, 127-144.
31. Lancaster, J. L. et al. 2000 Automated Talairach Atlas labels for functional brain mapping. Hum. Brain Mapp. 10, 120-131.
32. Lewis, J. W. & Van Essen, D. C. 2000 Mapping of architectonic subdivisions in the macaque monkey, with emphasis on parieto-occipital cortex. J. Comp. Neurol. 428, 79-111.
33. Luppino, G., Matelli, M., Camarda, R. M., Gallese, V. & Rizzolatti, G. 1991 Multiple representations of body movements in mesial area 6 and the adjacent cingulate cortex: an intracortical microstimulation study in the macaque monkey. J. Comp. Neurol. 311, 463-482.
34. Mauss, T. 1908 Die faserarchitektonische Gliederung der Großhirnrinde bei niederen Affen. J. Psychol. Neurol. 13, 263-325.
35. Mazziotta, J. et al. 2001 A probabilistic atlas and reference system for the human brain: international consortium for brain mapping (ICBM). Phil Trans. R. Soc. B 356, 1293-1322. (doi:10.1098/rstb.2001.0915.)
36. Meynert, T. 1868 Der Bau der Großhirnrinde und seine örtlichen Verschiedenheiten, nebst einem pathologisch-anatomischen Corollarium. Leipzig: Engelmann.
37. Mitz, A. R. & Wise, S. P. 1987 The somatotopic organization of the supplementary motor area: intracortical microstimulation mapping. J. Neurosci. 7, 1010-1021.
38. Morosan, P., Rademacher, J., Schleicher, A., Amunts, K., Schormann, T. & Zilles, K. 2001 Human primary auditory cortex: cytoarchitectonic subdivisions and mapping into a spatial reference system. NeuroImage, 13, 684-701. (doi:10.1006/nimg.2000.0715.)
39. Norden, J. J. & Kaas, J. H. 1978 The identification of relay neurons in the dorsal lateral geniculate nucleus of monkeys using horseradish peroxidase. J. Comp. Neurol. 182, 707-725.
40. Olszewski, J. 1952 The thalamus of Macaca mulatta. Basel: Karger.
41. Paxinos, G., Huang, X.-F. & Toga, A. W. 2000 The rhesus monkey brain in stereotaxic coordinates. San Diego, CA: Academic.
42. Petrides, M. & Pandya, D. N. 1994 Comparative architectonic analysis of the human and macaque frontal cortex. In Handbook of neuropsychology, vol. 9, ch. 2 (ed. F. Boller & J. Grafman).
43. Rademacher, J., Caviness, V. S., Jr, Steinmetz, H. & Galaburda, A. M. 1993 Topographical variation of the human primary cortices: implications for neuroimaging, brain mapping, and neurobiology. Cereb. Cortex 3, 313-329.
44. Rademacher, J., Bürgel, U. & Zilles, K. 2002 Stereotaxic localization, intersubject variability, and interhemispheric differences of the human auditory thalamocortical system. NeuroImage 17, 142-160.
45. Roland, P. et al. 2001 A database generator for human brain imaging. Trends Neurosci. 24, 562-564.
46. Scannell, J. W., Blakemore, C. & Young, M. P. 1995 Analysis of connectivity in the cat cerebral cortex. J. Neurosci. 15, 1463-1483.
47. Scannell, J. W., Burns, G. A. P. C., Hilgetag, C. C., O'Neil, M. A. & Young, M. P. 1999 The connectional organization of the cortico-thalamic system of the cat. Cereb. Cortex 9, 277-299.
48. Schleicher, A., Amunts, K., Geyer, S., Morosan, P. & Zilles, K. 1999 Observer-independent method for microstructural parcellation of cerebral cortex: a quantitative approach to cytoarchitectonics. NeuroImage 9, 165-177.
49. Seltzer, B. & Pandya, D. N. 1978 Afferent cortical connections and architectonics of the superior temporal sulcus and surrounding cortex in the rhesus monkey. Brain Res. 149, 1-24.
50. Sereno, M. I., Dale, A. M., Reppas, J. B., Kwong, K. K., Belliveau, J. W., Brady, T. J., Rosen, B. R. & Tootell, R. B. 1995 Borders of multiple visual areas in humans revealed by functional magnetic resonance imaging. Science 268, 889-893.
51. Sowell, E. R., Peterson, B. S., Thompson, P. M., Welcome, S. E., Henkenius, A. L. & Toga, A. W. 2003 Mapping cortical change across the human life span. Nat. Neurosci. 6, 309-315. (doi:10.1038/nn1008.)
52. Srinivas, P. R., Gusfield, D., Mason, O., Gertz, M., Hogarth, M., Stone, J., Jones, E. G. & Gorin, F. A. 2003 Neuroanatomical term generation and comparison between two terminologies. Neuroinformatics 1, 177-192.
53. Stephan, K. E., Zilles, K. & Kötter, R. 2000 Coordinate-independent mapping of structural and functional cortical data by objective relational transformation (ORT). Phil. Trans. R. Soc. B 355, 37-54.
54. Stephan, K. E., Kamper, L., Bozkurt, A., Burns, G. A. P. C., Young, M. P. & Kötter, R. 2001 CoCoMac: advanced database methodology for the collation of connectivity data on the macaque brain (CoCoMac). Phil. Trans. R. Soc. B, 356, 1159-1186. (doi:10.1098/rstb.2001.0908.)
55. Talairach, J. & Tournoux, P. 1988 Co-planar stereotaxic atlas of the human brain. 3-D proportional system: an approach to cerebral imaging. Stuttgart: Thieme.
56. Tanaka, K., Hikosaka, K., Saito, H., Yukie, M., Fukada, Y. & Iwai, E. 1986 Analysis of local and wide-field movements in the superior temporal visual areas of the macaque monkey. J. Neurosci. 6, 134-144.
57. Thompson, P. M., Schwartz, C., Lin, R. T., Khan, A. A. & Toga, A. W. 1996 Three-dimensional statistical analysis of sulcal variability in the human brain. J. Neurosci. 16, 4261-4274.
58. Thompson, P. M. et al. 2001 Genetic influences on brain structure. Nat. Neurosci. 4, 1253-1258. (doi:10.1038/nn758.)
59. Toga, A. W. & Thompson, P. M. 2001 Maps of the brain. New Anat. 265, 37-53.
60. Ungerleider, L. G. & Desimone, R. 1986 Projections to the superior temporal sulcus from the central and peripheral field representations of V1 and V2. J. Comp. Neurol. 248, 147-163.
61. Ungerleider, L. G. & Mishkin, M. 1979 The striate projection zone in the superior temporal sulcus of Macaca mulatta: location and topographic organization. J. Comp. Neurol. 188, 347-366.
62. Van Essen, D. C. 2004 Surface-based approaches to spatial localization and registration in primate cerebral cortex. NeuroImage, 23, S97-S107. (doi:10.1016/j.neuroimage. 2004.07.024.)
63. Van Essen, D. C., Maunsell, J. H. & Bixby, J. L. 1981 The middle temporal visual area in the macaque: myeloarchitecture, connections, functional properties and topographic organization. J. Comp. Neurol. 199, 293-326.
64. Van Essen, D. C., Drury, H. A., Dickson, J., Harwell, J., Hanlon, D. & Anderson, C. H. 2001a An integrated software suite for surface-based analyses of cerebral cortex. J. Am. Med. Inform. Assoc. 8, 443-459.
65. Van Essen, D. C., Lewis, J. W., Drury, H. A., Hadjikhani, N., Tootell, R. B. H., Bakircioglu, M. & Miller, M. I. 2001b Mapping visual cortex in monkeys and humans using surface-based atlases. Vision Res. 41, 1359-1378.
66. Van Horn, J. D., Grethe, J. S., Kostelec, P., Woodward, J. B., Aslam, J. A., Rus, D., Rockmore, D. & Gazzaniga, M. S. 2001 The functional magnetic resonance imaging data center (fMRIDC): the challenges and rewards of large-scale databasing of neuroimaging studies. Phil. Trans. R. Soc. B 356, 1323-1339.
67. Vogt, O. 1903 Zur anatomischen Gliederung des cortex cerebri. J. Psychol. Neurol. 2, 160-180.
68. Vogt, C. & Vogt, O. 1919 Ergebnisse unserer hirnforschung. 1.-4. Mitteilung. J. Psychol. Neurol. 25, 279-461.
69. von Bonin, G. & Bailey, P. 1947 The neocortex of Macaca mulatta. Urbana: University of Illinois Press.
70. Walker, E. A. 1940 A cytoarchitectural study of the prefrontal area of macaque monkey. J. Comp. Neurol. 73, 59-86.
71. Wanke, E. & Kötter, R. 2004 Oriented paths in mixed graphs. Proceedings of the 15th International Symposium on Algorithms and Computation (ISAAC). Lecture notes in computer science (ed. R. Fleischer & G. Trippen), pp. 629-643, Berlin: Springer.
72. Whitmore, I. 1998 Terminologia anatomica - international anatomical terminology, federative committee of anatomical terminology (FCAT). Stuttgart: Thieme.
73. Yeterian, E. H. & Pandya, D. N. 1991 Prefrontostriatal connections in relation to cortical architectonic organization in rhesus monkeys. J. Comp. Neurol. 312, 43-67.
74. Young, M. P. 1993 The organization of neural systems in the primate cerebral cortex. Proc. R. Soc. B 252, 13-18.
75. Zilles, K. 2004 Architecture of the human cerebral cortex. Regional and laminar organization. In The human nervous system (ed. G. Paxinos & J. K. Mai), pp. 997-1055, 2nd edn. San Diego, CA: Elsevier.