메뉴 건너뛰기




Volumn 7, Issue 2, 2005, Pages 95-103

Development of molecular probes for Dinophysis (Dinophyceae) plastid: A tool to predict blooming and explore plastid origin

Author keywords

Cryptophyte; Dinophysis; Fluorescent in situ hybridization (FISH); Plastid; Shellfish poisoning

Indexed keywords

FLUORESCENCE; PROBES; RNA;

EID: 21244449254     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-004-0482-5     Document Type: Article
Times cited : (32)

References (36)
  • 1
    • 0033834347 scopus 로고    scopus 로고
    • Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum
    • A.C. Barbrook C.J. Howe 2000 Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum Mol Gen Genet 263 152 158
    • (2000) Mol Gen Genet , vol.263 , pp. 152-158
    • Barbrook, A.C.1    Howe, C.J.2
  • 2
    • 0036919548 scopus 로고    scopus 로고
    • Cryptomonad evolution: Nuclear 18S rDNA phylogeny versus cell morphology and pigmentation
    • J.A. Deane I.M. Strachan G.W. Saunders D.R.A. Hill G.I. McFadden 2002 Cryptomonad evolution: nuclear 18S rDNA phylogeny versus cell morphology and pigmentation J Phycol 38 1236 1244
    • (2002) J Phycol , vol.38 , pp. 1236-1244
    • Deane, J.A.1    Strachan, I.M.2    Saunders, G.W.3    Hill, D.R.A.4    McFadden, G.I.5
  • 3
    • 0002080582 scopus 로고    scopus 로고
    • Dinophysis
    • Kouseisha Kouseikaku Tokyo, Japan
    • Y. Fukuyo 1997 Dinophysis T. Okaichi Akashio-no-kagaku 2 Kouseisha Kouseikaku Tokyo, Japan 274 278
    • (1997) Akashio-no-kagaku 2 , pp. 274-278
    • Fukuyo, Y.1    Okaichi, T.2
  • 4
    • 0000188314 scopus 로고
    • Evidence for the presence of phycoerythrin in Dinophysis norvegica, a pink dinoflagellate
    • R.J. Geider P.A. Gunter 1989 Evidence for the presence of phycoerythrin in Dinophysis norvegica, a pink dinoflagellate Br Phycol J 24 195 198
    • (1989) Br Phycol J , vol.24 , pp. 195-198
    • Geider, R.J.1    Gunter, P.A.2
  • 5
    • 21244466977 scopus 로고    scopus 로고
    • Phylogenetic evidence for the cryptophyte origin of the plastid of Dinophysis (Dinophysiales, Dinophyceae)
    • J.D. Hackett L. Maranda H.S. Yoon D. Bhattacharya 2003 Phylogenetic evidence for the cryptophyte origin of the plastid of Dinophysis (Dinophysiales, Dinophyceae) J Phycol 41 348 357
    • (2003) J Phycol , vol.41 , pp. 348-357
    • Hackett, J.D.1    Maranda, L.2    Yoon, H.S.3    Bhattacharya, D.4
  • 6
    • 0002326214 scopus 로고
    • The marine dinoflagellate genus Dinophysis (Dinophyceae): Photosynthetic, neritic and non-photosynthetic, oceanic species
    • G.M. Hallegraeff I.A.N. Lucas 1988 The marine dinoflagellate genus Dinophysis (Dinophyceae): photosynthetic, neritic and non-photosynthetic, oceanic species Phycologia 27 25 42
    • (1988) Phycologia , vol.27 , pp. 25-42
    • Hallegraeff, G.M.1    Lucas, I.A.N.2
  • 7
    • 0032430039 scopus 로고    scopus 로고
    • The phycobilin signatures of chloroplasts from three dinoflagellate species: A microanalytical study of Dinophysis caudata, D. fortii, and D. acuminata (Dinophysiales, Dinophyceae)
    • C.D. Hewes B.G. Mitchell T.A. Moisan M. Vernet F.M.H. Reid 1998 The phycobilin signatures of chloroplasts from three dinoflagellate species: a microanalytical study of Dinophysis caudata, D. fortii, and D. acuminata (Dinophysiales, Dinophyceae) J Phycol 34 945 951
    • (1998) J Phycol , vol.34 , pp. 945-951
    • Hewes, C.D.1    Mitchell, B.G.2    Moisan, T.A.3    Vernet, M.4    Reid, F.M.H.5
  • 8
    • 0036301949 scopus 로고    scopus 로고
    • Nuclear and nucleomorph SSU rDNA phylogeny in the cryptophyta and the evolution of cryptophyte diversity
    • K. Hoef-Emden B. Marin M. Melkonian 2002 Nuclear and nucleomorph SSU rDNA phylogeny in the cryptophyta and the evolution of cryptophyte diversity J Mol Evol 55 161 179
    • (2002) J Mol Evol , vol.55 , pp. 161-179
    • Hoef-Emden, K.1    Marin, B.2    Melkonian, M.3
  • 10
    • 0028141271 scopus 로고
    • The discovery of mixotrophy in photosynthesis species of Dinophysis (Dinophyceae): Light and electron microscopical observations of food vacuoles in Dinophysis acuminata, D. norvegica and two heterotrophic dinophysoid dinoflagellates
    • D.M. Jacobson R.A. Andersen 1994 The discovery of mixotrophy in photosynthesis species of Dinophysis (Dinophyceae): light and electron microscopical observations of food vacuoles in Dinophysis acuminata, D. norvegica and two heterotrophic dinophysoid dinoflagellates Phycologia 33 97 110
    • (1994) Phycologia , vol.33 , pp. 97-110
    • Jacobson, D.M.1    Andersen, R.A.2
  • 11
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • M. Kimura 1980 A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences J Mol Evol 16 111 120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 12
    • 21244442861 scopus 로고    scopus 로고
    • Mixotrophy of Dinophysis fortii: A strategy for growth in various environmental conditions
    • Suppl 1
    • K. Koike 2002 Mixotrophy of Dinophysis fortii: a strategy for growth in various environmental conditions Fish Sci 68 Suppl 1 529 532
    • (2002) Fish Sci , vol.68 , pp. 529-532
    • Koike, K.1
  • 13
    • 0033920282 scopus 로고    scopus 로고
    • Evidence of phagotrophy in Dinophysis fortii (Dinophysiales, Dinophyceae), a dinoflagellate that causes diarrhetic shellfish poisoning (DSP)
    • K. Koike K. Koike M. Takagi T. Ogata T. Ishimaru 2000 Evidence of phagotrophy in Dinophysis fortii (Dinophysiales, Dinophyceae), a dinoflagellate that causes diarrhetic shellfish poisoning (DSP) Phycolog Res 48 121 124
    • (2000) Phycolog Res , vol.48 , pp. 121-124
    • Koike, K.1    Koike, K.2    Takagi, M.3    Ogata, T.4    Ishimaru, T.5
  • 14
    • 0034974284 scopus 로고    scopus 로고
    • Recent occurrences of Dinophysis fortii (Dinophyceae) in the Okkirai Bay, Sanriku, Northern Japan, and related environmental factors
    • K. Koike H. Otobe M. Takagi T Yoshida T. Ogata T. Ishimaru 2001 Recent occurrences of Dinophysis fortii (Dinophyceae) in the Okkirai Bay, Sanriku, Northern Japan, and related environmental factors J Oceanogr 57 165 175
    • (2001) J Oceanogr , vol.57 , pp. 165-175
    • Koike, K.1    Otobe, H.2    Takagi, M.3    Yoshida, T.4    Ogata, T.5    Ishimaru, T.6
  • 15
    • 0010699820 scopus 로고
    • Endocytobiotic consortia with dinoflagellate hosts
    • Explored Biopress Bristol, U.K.
    • J. Larsen 1992 Endocytobiotic consortia with dinoflagellate hosts W. Reisser Algae, Fungi, Viruses, Interactions Explored Biopress Bristol, U.K. 427 442
    • (1992) Algae, Fungi, Viruses, Interactions , pp. 427-442
    • Larsen, J.1    Reisser, W.2
  • 18
    • 0001335079 scopus 로고
    • Dinoflagellates from the North Atlantic classified as phototrophic or heterotrophic by epifluorescence microscopy
    • E. Lessard E. Swift 1986 Dinoflagellates from the North Atlantic classified as phototrophic or heterotrophic by epifluorescence microscopy J Plankton Res 8 1209 1215
    • (1986) J Plankton Res , vol.8 , pp. 1209-1215
    • Lessard, E.1    Swift, E.2
  • 19
    • 84986869969 scopus 로고
    • The fine structure of two photosynthetic species of Dinophysis (Dinophysiales, Dinophyceae)
    • I.A.N. Lucas M. Vesk 1990 The fine structure of two photosynthetic species of Dinophysis (Dinophysiales, Dinophyceae) J Phycol 26 345 357
    • (1990) J Phycol , vol.26 , pp. 345-357
    • Lucas, I.A.N.1    Vesk, M.2
  • 20
    • 0033857226 scopus 로고    scopus 로고
    • On detection of Pseudo-nitzschia (Bacillariophyceae) species using whole cell hybridization: Sample fixation and stability
    • P.E. Miller C. A. Scholin 2000 On detection of Pseudo-nitzschia (Bacillariophyceae) species using whole cell hybridization: sample fixation and stability J Phycol 36 238 250
    • (2000) J Phycol , vol.36 , pp. 238-250
    • Miller, P.E.1    Scholin, C.A.2
  • 21
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • D. Posada K.A. Crandali 1998 MODELTEST: testing the model of DNA substitution Bioinformatics 14 817 818
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandali, K.A.2
  • 22
    • 0031964656 scopus 로고    scopus 로고
    • Phylogenetic diversity of ultraplankton plastid small-subunit rRNA genes recovered in environmental nucleic acid samples from the Pacific and Atlantic coasts of the United States
    • M.S. Rappe M.T. Suzuki K.L. Vergin S.J. Giovannoni 1998 Phylogenetic diversity of ultraplankton plastid small-subunit rRNA genes recovered in environmental nucleic acid samples from the Pacific and Atlantic coasts of the United States Appl Environ Microbiol 64 294 303
    • (1998) Appl Environ Microbiol , vol.64 , pp. 294-303
    • Rappe, M.S.1    Suzuki, M.T.2    Vergin, K.L.3    Giovannoni, S.J.4
  • 23
    • 0036656436 scopus 로고    scopus 로고
    • Molecular studies of Dinophysis (Dinophyceae) species from Sweden and North America
    • A. Rehnstam-Holm A. Godhe D.M. Anderson 2002 Molecular studies of Dinophysis (Dinophyceae) species from Sweden and North America Phycologia 41 348 357
    • (2002) Phycologia , vol.41 , pp. 348-357
    • Rehnstam-Holm, A.1    Godhe, A.2    Anderson, D.M.3
  • 24
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou M. Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 25
    • 85024800022 scopus 로고
    • Cryptophycean-like double-membrane bounded chloroplast in the dinoflagellate, Dinophysis Ehrenb: Evolutionary, phylogenetic and toxicological implications
    • E. Schnepf M. Elbrächter 1988 Cryptophycean-like double-membrane bounded chloroplast in the dinoflagellate, Dinophysis Ehrenb: evolutionary, phylogenetic and toxicological implications Bot Acta 101 196 203
    • (1988) Bot Acta , vol.101 , pp. 196-203
    • Schnepf, E.1    Elbrächter, M.2
  • 26
    • 0002820495 scopus 로고
    • Nutritional strategy in dinoflagellates: A review with emphasis on cell biological aspects
    • E. Schnepf M. Elbrächter 1992 Nutritional strategy in dinoflagellates: a review with emphasis on cell biological aspects Eur J Protistol 28 3 24
    • (1992) Eur J Protistol , vol.28 , pp. 3-24
    • Schnepf, E.1    Elbrächter, M.2
  • 27
    • 0033499020 scopus 로고    scopus 로고
    • Dinophyte chloroplasts and phylogeny: A review
    • E. Schnepf M. Elbrächter 1999 Dinophyte chloroplasts and phylogeny: a review Grana 38 81 97
    • (1999) Grana , vol.38 , pp. 81-97
    • Schnepf, E.1    Elbrächter, M.2
  • 28
    • 0033934124 scopus 로고    scopus 로고
    • Origin of the plastid in the anomalously pigmented dinoflagellate Gymnodinium mikimotoi (Gymnodiniales Dinophyta) as inferred from phylogenetic analysis based on the gene encoding the large subunit of form I-type RuBisCO
    • K. Takishita K. Nakano A. Uchida 2000 Origin of the plastid in the anomalously pigmented dinoflagellate Gymnodinium mikimotoi (Gymnodiniales Dinophyta) as inferred from phylogenetic analysis based on the gene encoding the large subunit of form I-type RuBisCO Phycol Res 48 85 89
    • (2000) Phycol Res , vol.48 , pp. 85-89
    • Takishita, K.1    Nakano, K.2    Uchida, A.3
  • 29
    • 0036744517 scopus 로고    scopus 로고
    • Molecular evidence for plastid robbery (kleptoplastidy) in Dinophysis, a dinoflagellate causing diarrhetic shellfish poisoning
    • K. Takishita K. Koike T. Maruyama T. Ogata 2002 Molecular evidence for plastid robbery (kleptoplastidy) in Dinophysis, a dinoflagellate causing diarrhetic shellfish poisoning Protist 153 293 302
    • (2002) Protist , vol.153 , pp. 293-302
    • Takishita, K.1    Koike, K.2    Maruyama, T.3    Ogata, T.4
  • 30
    • 0033624957 scopus 로고    scopus 로고
    • Phylogenetic analyses indicate that the 19′ hexanoyloxy- fucoxanthin-containing dinoflagellates have tertiary plastids of haptophyte origin
    • T Tengs O.J. Dahlberg K. Shalchian-Tabrizi D. Klaveness K. Rudi C.F. Delwiche K.S. Jakobsen 2000 Phylogenetic analyses indicate that the 19′ hexanoyloxy-fucoxanthin-containing dinoflagellates have tertiary plastids of haptophyte origin Mol Biol Evol 17 718 729
    • (2000) Mol Biol Evol , vol.17 , pp. 718-729
    • Tengs, T.1    Dahlberg, O.J.2    Shalchian-Tabrizi, K.3    Klaveness, D.4    Rudi, K.5    Delwiche, C.F.6    Jakobsen, K.S.7
  • 31
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J.D. Thompson D.G. Higgins T.J. Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 32
    • 0001038672 scopus 로고    scopus 로고
    • Immunogold localization of phycoerythrin in chloroplasts of Dinophysis acuminata and D. fortii (Dinophysiales, Dinophyta)
    • M. Vesk T.P. Dibbayawan P.A. Vesk 1996 Immunogold localization of phycoerythrin in chloroplasts of Dinophysis acuminata and D. fortii (Dinophysiales, Dinophyta) Phycologia 35 234 238
    • (1996) Phycologia , vol.35 , pp. 234-238
    • Vesk, M.1    Dibbayawan, T.P.2    Vesk, P.A.3
  • 35
    • 0033536215 scopus 로고    scopus 로고
    • Single gene circles in dinoflagellate chloroplast genomes
    • Z. Zhang B.R. Green T. Cavalier-Smith 1999 Single gene circles in dinoflagellate chloroplast genomes Nature 400 155 159
    • (1999) Nature , vol.400 , pp. 155-159
    • Zhang, Z.1    Green, B.R.2    Cavalier-Smith, T.3
  • 36
    • 0033929166 scopus 로고    scopus 로고
    • Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: A possible common origin for sporozoan and dinoflagellate plastids
    • Z. Zhang B.R. Green T. Cavalier-Smith 2000 Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: a possible common origin for sporozoan and dinoflagellate plastids J Mol Evol 51 26 40
    • (2000) J Mol Evol , vol.51 , pp. 26-40
    • Zhang, Z.1    Green, B.R.2    Cavalier-Smith, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.