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Volumn 39, Issue 1, 2004, Pages 1-19

Generalization of a suffix tree for RNA structural pattern matching

Author keywords

Computational biology; Parameterized suffix tree; Pattern matching; RNA structure matching; Suffix tree generalization

Indexed keywords

ALGORITHMS; BOUNDARY VALUE PROBLEMS; COMPUTATIONAL METHODS; DATABASE SYSTEMS; DNA SEQUENCES; MOLECULAR BIOLOGY; PARAMETER ESTIMATION; PATTERN MATCHING; RNA;

EID: 21044459032     PISSN: 01784617     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00453-003-1067-9     Document Type: Article
Times cited : (42)

References (21)
  • 3
    • 0039528117 scopus 로고
    • A program for identifying duplicated code
    • Interface Foundation of North America, Fairfax Station, VA
    • B. S. Baker, A Program for Identifying Duplicated Code, Computing Science and Statistics, Interface Foundation of North America, Fairfax Station, VA, 1992, pp. 49-57.
    • (1992) Computing Science and Statistics , pp. 49-57
    • Baker, B.S.1
  • 5
    • 0030084599 scopus 로고    scopus 로고
    • Parameterized pattern matching: Algorithms and applications
    • B. S. Baker, Parameterized Pattern Matching: Algorithms and Applications, J. Comput. System Sci., 52(1) (1996), 28-42.
    • (1996) J. Comput. System Sci. , vol.52 , Issue.1 , pp. 28-42
    • Baker, B.S.1
  • 6
    • 0013238532 scopus 로고    scopus 로고
    • Parameterized duplication in strings: Algorithms and application to software maintenance
    • B. S. Baker, Parameterized Duplication in Strings: Algorithms and Application to Software Maintenance, SIAM J. Comput., 26(5) (1997), 1343-1362.
    • (1997) SIAM J. Comput. , vol.26 , Issue.5 , pp. 1343-1362
    • Baker, B.S.1
  • 11
    • 0021426157 scopus 로고
    • Fast algorithms for finding nearest common ancestors
    • D. Harel and R. R. Tarjan, Fast Algorithms for Finding Nearest Common Ancestors, SIAM J. Comput., 13 (1984), 338-355.
    • (1984) SIAM J. Comput. , vol.13 , pp. 338-355
    • Harel, D.1    Tarjan, R.R.2
  • 15
    • 0016942292 scopus 로고
    • A space-economical suffix tree construction algorithm
    • E. M. McCreight, A Space-Economical Suffix Tree Construction Algorithm, J. Assoc. Comput. Mach., 23 (1976), 262-272.
    • (1976) J. Assoc. Comput. Mach. , vol.23 , pp. 262-272
    • McCreight, E.M.1
  • 18
    • 0001704377 scopus 로고
    • On-line construction of suffix-trees
    • E. Ukkonen, On-Line Construction of Suffix-Trees, Algorithmica, 14 (1995), 249-260.
    • (1995) Algorithmica , vol.14 , pp. 249-260
    • Ukkonen, E.1
  • 19
    • 21044443104 scopus 로고    scopus 로고
    • Finding common RNA secondary structures from RNA sequences
    • Proc. 4th Symposium on Combinatorial Pattern Matching, Springer-Verlag, Berlin
    • Z. Wang and K. Zhang, Finding Common RNA Secondary Structures from RNA Sequences, Proc. 4th Symposium on Combinatorial Pattern Matching, LNCS 1645, Springer-Verlag, Berlin, 1999, pp. 258-269.
    • (1999) LNCS , vol.1645 , pp. 258-269
    • Wang, Z.1    Zhang, K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.