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Volumn 253, Issue 1-4, 2005, Pages 53-64

The monophyly and evolution of Cynara L. (Asteraceae) sensu lato: Evidence from the Internal Transcribed Spacer region of nrDNA

Author keywords

Arcyna; Asteraceae; Carduinae; Cynara; Hybridisation; ITS; Molecular phylogeny; Pseudogenes

Indexed keywords

ASTERACEAE; CYNARA; CYNARA HUMILIS; SILYBUM;

EID: 20944440078     PISSN: 03782697     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00606-004-0259-3     Document Type: Article
Times cited : (22)

References (38)
  • 1
    • 0344613211 scopus 로고    scopus 로고
    • Ribosomal ITS sequences and plant phylogenetic inference
    • Álvarez I., Wendel J.F. (2003) Ribosomal ITS sequences and plant phylogenetic inference. Mol. Phylogenet. Evol. 29: 417-434.
    • (2003) Mol. Phylogenet. Evol. , vol.29 , pp. 417-434
    • Álvarez, I.1    Wendel, J.F.2
  • 3
    • 0029976001 scopus 로고    scopus 로고
    • Zea systematics: Ribosomal ITS evidence
    • Buckler E., Holtsfort T. P. (1996) Zea systematics: ribosomal ITS evidence. Mol. Biol. Evol. 13: 612-622.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 612-622
    • Buckler, E.1    Holtsfort, T.P.2
  • 4
    • 0031892790 scopus 로고    scopus 로고
    • Molecular phylogeny of the genus Hypochaeris using internal transcribed spacers of nuclear rDNA: Inference for chromosomal evolution
    • Cerbah M., Souza-Chies T., Jubier M.F., Lejeune B., Siljak-Yakovlev S. (1998) Molecular phylogeny of the genus Hypochaeris using internal transcribed spacers of nuclear rDNA: inference for chromosomal evolution. Mol. Biol. Evol. 15: 345-354.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 345-354
    • Cerbah, M.1    Souza-Chies, T.2    Jubier, M.F.3    Lejeune, B.4    Siljak-Yakovlev, S.5
  • 6
    • 0034702467 scopus 로고    scopus 로고
    • High intraindividual variation in internal transcribed spacer sequences in Aeschynanthus (Gesneriaceae) implications for phylogenetics
    • Denduangboripant J., Cronk Q. C. B. (2000) High intraindividual variation in internal transcribed spacer sequences in Aeschynanthus (Gesneriaceae) implications for phylogenetics. Proc. Roy. Soc. Lond. B 267: 1407-1415.
    • (2000) Proc. Roy. Soc. Lond. B , vol.267 , pp. 1407-1415
    • Denduangboripant, J.1    Cronk, Q.C.B.2
  • 7
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle J. J., Doyle J. L. (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.
    • (1987) Phytochem. Bull. , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 8
    • 0031778412 scopus 로고    scopus 로고
    • Molecular phylogenies on the tribe Inuleae (Asteraceae), based on ITS sequences of nuclear ribosomal DNA
    • Eldenäs P., Anderberg A. A., Källersjö M. (1998) Molecular phylogenies on the tribe Inuleae (Asteraceae), based on ITS sequences of nuclear ribosomal DNA. Pl. Syst. Evol. 210: 159-173.
    • (1998) Pl. Syst. Evol. , vol.210 , pp. 159-173
    • Eldenäs, P.1    Anderberg, A.A.2    Källersjö, M.3
  • 9
    • 0000569073 scopus 로고
    • The retention index and homoplasy excess
    • Farris J. S. (1989) The retention index and homoplasy excess. Syst. Zool. 38: 406-407.
    • (1989) Syst. Zool. , vol.38 , pp. 406-407
    • Farris, J.S.1
  • 10
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. F. (1985) Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.F.1
  • 11
    • 0036396049 scopus 로고    scopus 로고
    • Phylogenetic position of Mediterranean Astereae and character evolution of daisies (Bellis, Asteraceae) inferred from nrDNA ITS sequences
    • Fiz O., Valcarcel V., Vargas P. (2002) Phylogenetic position of Mediterranean Astereae and character evolution of daisies (Bellis, Asteraceae) inferred from nrDNA ITS sequences. Mol. Phylogenet. Evol. 25: 157-171.
    • (2002) Mol. Phylogenet. Evol. , vol.25 , pp. 157-171
    • Fiz, O.1    Valcarcel, V.2    Vargas, P.3
  • 12
    • 0036861122 scopus 로고    scopus 로고
    • Delineation and phylogeny of Centaurea sect. Acrocentron based on DNA sequences: A restoration of the genus Crocodylium and indirect evidence of introgression
    • Font M., Garnatje T., Garcia-Jacas N., Susanna A. (2002) Delineation and phylogeny of Centaurea sect. Acrocentron based on DNA sequences: a restoration of the genus Crocodylium and indirect evidence of introgression. Pl. Syst. Evol. 234: 15-26.
    • (2002) Pl. Syst. Evol. , vol.234 , pp. 15-26
    • Font, M.1    Garnatje, T.2    Garcia-Jacas, N.3    Susanna, A.4
  • 13
    • 84880211268 scopus 로고
    • Cynara L.
    • Cambridge University Press
    • Franco J. (1976) Cynara L. In: Flora Europaea. Cambridge University Press, 4: 248.
    • (1976) Flora Europaea , vol.4 , pp. 248
    • Franco, J.1
  • 14
    • 0036366236 scopus 로고    scopus 로고
    • Tribal and subtribal delimitation and phylogeny of the Cardueae (Asteraceae): A combined nuclear and cloroplast DNA analysis. Molec
    • Garcia-Jacas N., Susanna A., Garnàtje T., Vilatersana R. (2002) Tribal and subtribal delimitation and phylogeny of the Cardueae (Asteraceae): a combined nuclear and cloroplast DNA analysis. Molec. Phylogenet. Evol. 22: 51-64.
    • (2002) Phylogenet. Evol. , vol.22 , pp. 51-64
    • Garcia-Jacas, N.1    Susanna, A.2    Garnàtje, T.3    Vilatersana, R.4
  • 15
    • 0033302746 scopus 로고    scopus 로고
    • Internal transcribed spacer region evolution in Larix and Pseudotsuga (Pinaceae)
    • Gernandt D. S., Liston A. (1999) Internal transcribed spacer region evolution in Larix and Pseudotsuga (Pinaceae). Amer. J. Bot. 86: 711-723.
    • (1999) Amer. J. Bot. , vol.86 , pp. 711-723
    • Gernandt, D.S.1    Liston, A.2
  • 16
    • 0346246281 scopus 로고    scopus 로고
    • On the phylogeny of the subtribe Carduinae (Cardueae, Compositae)
    • Häffner E. (2000) On the phylogeny of the subtribe Carduinae (Cardueae, Compositae). Englera 21: 1-209.
    • (2000) Englera , vol.21 , pp. 1-209
    • Häffner, E.1
  • 17
    • 0002474311 scopus 로고    scopus 로고
    • Phylogeny of the tribe Cardueae (Compositae) with emphasis on the subtribe Carduinae: An analysis based on ITS sequence data
    • Häffner E., Hellwig F. H. (1999) Phylogeny of the tribe Cardueae (Compositae) with emphasis on the subtribe Carduinae: an analysis based on ITS sequence data. Willdenowia 29: 27-39.
    • (1999) Willdenowia , vol.29 , pp. 27-39
    • Häffner, E.1    Hellwig, F.H.2
  • 18
    • 0034946250 scopus 로고    scopus 로고
    • Extensive ribosomal DNA genic variation in the columnar cactus Lophocereus
    • Hartman S., Nason J. D., Bhattacharya D. (2001) Extensive ribosomal DNA genic variation in the columnar cactus Lophocereus. J. Mol. Evol. 53: 124-134.
    • (2001) J. Mol. Evol. , vol.53 , pp. 124-134
    • Hartman, S.1    Nason, J.D.2    Bhattacharya, D.3
  • 19
    • 0036065546 scopus 로고    scopus 로고
    • Divergent and reticulate species relationships in Leucaena (Fabaceae) inferred from multiple data sources: Insights into polyploid origins and nrDNA polymorphysm
    • Hughes C., Bailey C. D., Harris S. A. (2002) Divergent and reticulate species relationships in Leucaena (Fabaceae) inferred from multiple data sources: insights into polyploid origins and nrDNA polymorphysm. Amer. J. Bot. 89: 1057-1073.
    • (2002) Amer. J. Bot. , vol.89 , pp. 1057-1073
    • Hughes, C.1    Bailey, C.D.2    Harris, S.A.3
  • 20
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of Anurans
    • Kluge A. G., Farris J. S. (1969) Quantitative phyletics and the evolution of Anurans. Syst. Zool. 18(1): 1-32.
    • (1969) Syst. Zool. , vol.18 , Issue.1 , pp. 1-32
    • Kluge, A.G.1    Farris, J.S.2
  • 21
    • 0033591465 scopus 로고    scopus 로고
    • Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
    • Mathews D. H., Sabina J., Zuker M., Turner D. H. (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J. Mol. Biol. 288: 911-940.
    • (1999) J. Mol. Biol. , vol.288 , pp. 911-940
    • Mathews, D.H.1    Sabina, J.2    Zuker, M.3    Turner, D.H.4
  • 22
    • 0034782104 scopus 로고    scopus 로고
    • Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus
    • Mayol M., Rosseló J. A. (2001) Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus. Mol. Phylogenet. Evol. 19: 167-176.
    • (2001) Mol. Phylogenet. Evol. , vol.19 , pp. 167-176
    • Mayol, M.1    Rosseló, J.A.2
  • 23
    • 2142815111 scopus 로고    scopus 로고
    • Fine-scale geographical structure, intra-individual polymorphism and recombination in nuclear ribosomal internal transcribed spacers in Armeria (Plumbaginaceae)
    • Nieto Feliner G., Gutierrez B., Fuertes Aguilar J. (2004) Fine-scale geographical structure, intra-individual polymorphism and recombination in nuclear ribosomal internal transcribed spacers in Armeria (Plumbaginaceae). Ann. Bot. 93: 189-200.
    • (2004) Ann. Bot. , vol.93 , pp. 189-200
    • Nieto Feliner, G.1    Gutierrez, B.2    Fuertes Aguilar, J.3
  • 24
    • 0034836859 scopus 로고    scopus 로고
    • Phylogenetic relationships in Anthemis L. (Compositae, Anthemideae) based on nrDNA ITS sequence variation
    • Oberprieler C. (2001) Phylogenetic relationships in Anthemis L. (Compositae, Anthemideae) based on nrDNA ITS sequence variation. Taxon 50: 745-762.
    • (2001) Taxon , vol.50 , pp. 745-762
    • Oberprieler, C.1
  • 25
    • 0003626439 scopus 로고    scopus 로고
    • Software distributed by the Author, Department of Zoology, University of Oxford, Oxford
    • Rambaut A. (1996) Se-Al, Sequence Alignment Editor. Version 1.0 alpha 1. Software distributed by the Author, Department of Zoology, University of Oxford, Oxford. Available from http:// evolve.zoo.ox.ac.uk/Se-Al/Se-Al.html)
    • (1996) Se-Al, Sequence Alignment Editor. Version 1.0 Alpha 1
    • Rambaut, A.1
  • 26
  • 27
    • 20944436256 scopus 로고    scopus 로고
    • Wild genetic resources of cultivated artichoke
    • Proceedings of IV International Congress on Artichoke - October 17-21, 2000, Valenzano (Bari) - Italy
    • Rottenberg A., Zohary D. (2000) Wild genetic resources of cultivated artichoke. Acta horticolturae. Proceedings of IV International Congress on Artichoke - October 17-21, 2000, Valenzano (Bari) - Italy: 52.
    • (2000) Acta Horticolturae , pp. 52
    • Rottenberg, A.1    Zohary, D.2
  • 28
    • 0027952288 scopus 로고
    • Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA
    • Sun Y. D. Z., Skinner G. H., Liang S. H., Hulbert (1994) Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA. Theor. Appl. Genet. 89: 26-26.
    • (1994) Theor. Appl. Genet. , vol.89 , pp. 26-26
    • Sun, Y.D.Z.1    Skinner, G.H.2    Liang, S.H.3    Hulbert4
  • 29
    • 0028834186 scopus 로고
    • Phylogenetic relationships in tribe Cardueae (Asteraceae) based on ITS sequences
    • Susanna A., Garcia-Jacas N., Soltis D. E., Soltis P. S. (1995) Phylogenetic relationships in tribe Cardueae (Asteraceae) based on ITS sequences. Amer. J. Bot. 82: 1056-1068.
    • (1995) Amer. J. Bot. , vol.82 , pp. 1056-1068
    • Susanna, A.1    Garcia-Jacas, N.2    Soltis, D.E.3    Soltis, P.S.4
  • 31
    • 0032757924 scopus 로고    scopus 로고
    • Phylogeny in Artemisia (Asteraceae, Anthemideae) inferred from nuclear ribosomal DNA (ITS) sequences
    • Torrell M., Garcia-Jacas N., Susanna A., Valles J. (1999) Phylogeny in Artemisia (Asteraceae, Anthemideae) inferred from nuclear ribosomal DNA (ITS) sequences. Taxon 48: 721-736.
    • (1999) Taxon , vol.48 , pp. 721-736
    • Torrell, M.1    Garcia-Jacas, N.2    Susanna, A.3    Valles, J.4
  • 32
    • 0028917850 scopus 로고
    • Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium)
    • Wendel F., Schnabel A., Seelanan T. (1995) Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium). Proc. Natl. Acad. Sci. U.S.A. 92: 280-284.
    • (1995) Proc. Natl. Acad. Sci. U.S.A. , vol.92 , pp. 280-284
    • Wendel, F.1    Schnabel, A.2    Seelanan, T.3
  • 33
    • 20944446060 scopus 로고
    • A study of the morphological variability in Cynara humilis L. and C. hystrix Ball. (Asteraceae-Cardueae)
    • Wiklund A. (1989) A study of the morphological variability in Cynara humilis L. and C. hystrix Ball. (Asteraceae-Cardueae). Lazaroa 11: 19-27.
    • (1989) Lazaroa , vol.11 , pp. 19-27
    • Wiklund, A.1
  • 34
    • 0002734255 scopus 로고
    • The genus Cynara L. (Asteraceae, Cardueae)
    • Wiklund A. (1992) The genus Cynara L. (Asteraceae, Cardueae). Bot. J. Linn. Soc. 109: 75-123.
    • (1992) Bot. J. Linn. Soc. , vol.109 , pp. 75-123
    • Wiklund, A.1
  • 35
    • 20944447411 scopus 로고    scopus 로고
    • Arcyna a new genus segregated from Cynara (Compositae)
    • Wiklund A. (2003) Arcyna a new genus segregated from Cynara (Compositae). Willdenowia 33: 63-68.
    • (2003) Willdenowia , vol.33 , pp. 63-68
    • Wiklund, A.1
  • 36
    • 20944449436 scopus 로고
    • Bourgaea tournefortii Willk
    • Willkomm M. (1852) Bourgaea tournefortii Willk. Linnaea 25: 39.
    • (1852) Linnaea , vol.25 , pp. 39
    • Willkomm, M.1
  • 37
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • Zuker M. (1989) On finding all suboptimal foldings of an RNA molecule. Science 244: 48-52.
    • (1989) Science , vol.244 , pp. 48-52
    • Zuker, M.1
  • 38
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridisation prediction
    • Zuker M. (2003) Mfold web server for nucleic acid folding and hybridisation prediction. Nucleic Acids Res. 31(13): 3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , Issue.13 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.