Seroprevalence and genomic divergence of circulating strains of feline immunodeficiency virus among Felidae and Hyaenidae species

Journal of Virology

Volumn 79, Issue 13, 2005, Pages 8282-8294

  Troyer, Jennifer L ^a,b   Pecon Slattery, Jill ^a   Roelke, Melody E ^c   Johnson, Warren ^a   VandeWoude, Sue ^b   Vazquez Salat, Nuria ^c   Brown, Meredith ^a   Frank, Laurence ^d   Woodroffe, Rosie ^e   Winterbach, Christiaan ^f   Winterbach, Hanlie ^f   Hemson, Graham ^g   Bush, Mitch ^h   Alexander, Kathleen A ⁱ   Revilla, Eloy ^j   O'Brien, Stephen J ^a  

^a NATIONAL CANCER INSTITUTE   (United States)

^b Department of Environmental and Radiological Health Sciences   (United States)

^c SAIC FREDERICK INC   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f Tau Consultants (Pty) Ltd   (Botswana)

^g UNIVERSITY OF OXFORD   (United Kingdom)

^h SMITHSONIAN CONSERVATION BIOLOGY INSTITUTE   (United States)

ⁱ and Land use   (Botswana)

^j DEPARTMENT OF CONSERVATION BIOLOGY   (Spain)

more..

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CARNIVORA; CARNIVORE; CAT; CHEETAH; FELIDAE; FELINE IMMUNODEFICIENCY VIRUS; HOST; HUMAN IMMUNODEFICIENCY VIRUS; LION; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEROPREVALENCE; SIMIAN IMMUNODEFICIENCY VIRUS; SPECIES; SPECIES DIFFERENCE; STRAIN DIFFERENCE; TIGER; VIRUS GENE; VIRUS GENOME; VIRUS STRAIN; VIRUS TRANSMISSION; WESTERN BLOTTING;

AMINO ACID SEQUENCE; ANIMALS; ANTIGENS, VIRAL; BASE SEQUENCE; CARNIVORA; CATS; DNA PRIMERS; FELIDAE; GENOME, VIRAL; HYAENIDAE; IMMUNODEFICIENCY VIRUS, FELINE; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; VARIATION (GENETICS);

ACINONYX JUBATUS; CROCUTA CROCUTA; FELIDAE; FELINE IMMUNODEFICIENCY VIRUS; FELIS CATUS; HUMAN IMMUNODEFICIENCY VIRUS; HYAENIDAE; LEOPARDUS PARDALIS; LEOPARDUS WIEDII; OTOCOLOBUS MANUL; PANTHERA LEO; PANTHERA PARDUS; PRIONAILURUS BENGALENSIS; PUMA (FELIDAE); PUMA CONCOLOR; SIMIAN IMMUNODEFICIENCY VIRUS;

EID: 20744439369     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.13.8282-8294.2005     Document Type: Article

References (38)

1. Adachi, J., and M. Hasegawa. 1996. MOLPHY: version 2.3: programs for molecular phylogenetics based on maximum likelihood. Comput. Sci. Monogr. 28:1-150.
2. Altschul, S. F., T. L. Madden, A. A. Schäffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
3. Barr, M. C., L. Zou, F. Long, W. A. Hoose, and R. J. Avery. 1997. Proviral organization and sequence analysis of feline immunodeficiency virus isolated from a Pallas' cat. Virology 228:84-91.
4. Beer, B. E., E. Bailes, R. Goeken, G. Dapolito, C. Coulibaly, S. G. Norley, R. Kurth, J. P. Gautier, A. Gautier-Hion, D. Vallet, P. M. Sharp, V. M. Hirsch. 1999. Simian immunodeficiency virus (SIV) from sun-tailed monkeys (Cercopithecus solatus): evidence for host-dependent evolution of SIV within the C. lhoesti superspecies. J. Virol. 73:7734-7744.
5. Biek, R., A. G. Rodrigo, D. Holley, A. Drummond, C. R. Anderson, Jr., H. A. Ross, and M. Poss. 2003. Epidemiology, genetic diversity, and evolution of endemic feline immunodeficiency virus in a population of wild cougars. J. Virol. 77:9578-9589.
6. Brown, E. W., R. A. Olmstead, J. S. Martenson, and S. J. O'Brien. 1993. Exposure to FIV and FIPV in wild and captive cheetahs. Zoo Biol. 12:135-142.
7. Brown, E. W., S. Miththapala, and S. J. O'Brien. 1993. Prevalence of exposure to feline immunodeficiency virus is exotic felid species. J. Zool. Wildl. Med. 20:265-272.
8. Brown, E. W., N. Yuhki, C. Packer, and S. J. O'Brien. 1994. A lion lentivirus related to feline immunodeficiency virus: epidemiologic and phylogenetic aspects. J. Virol. 68:5953-5968.
9. Carpenter, M. A., and S. J. O'Brien. 1995. Coadaptation and immunodeficiency virus: lessons from the Felidae. Curr. Opin. Genet. Dev. 5:739-745.
10. Carpenter, M. A., E. W. Brown, M. Culver, W. E. Johnson, J. Pecon-Slattery, D. Brousset, and S. J. O'Brien. 1996. Genetic and phylogenetic divergence of feline immunodeficiency virus in the puma (Puma concolor). J. Virol. 70: 6682-6693.
11. Carpenter, M. A., E. W. Brown, D. W. MacDonald, and S. J. O'Brien. 1998. Phylogeographic patterns of feline immunodeficiency virus genetic diversity in the domestic cat. Virology 251:234-243.
12. Dayhoff, M. O. 1978. Atlas of protein sequence and structure, vol. 5, suppl. 3. National Biomedical Research Foundation, Silver Spring, Md.
13. Felsenstein, J. 1989. PHYLIP: phylogeny inference package (version 3.2). Cladistics 5:164-166.
14. Hofmann-Lehmann, R., D. Fehr, M. Grob, M. Elgizoli, C. Packer, J. S. Matenson, S. J. O'Brien, and H. Lutz. 1996. Prevalence of antibodies to feline parvovirus, calicivirus, herpesvirus, coronavirus, and immunodeficiency virus and of feline leukemia virus antigen and the interrelationship of these viral infections in free-ranging lions in East Africa. Clin. Diagn. Lab. Immunol. 3:554-562.
15. Hu, J., W. M. Switzer, B. T. Foley, D. L. Robertson, R. M. Goeken, B. T. Korber, V. M. Hirsch, and B. E. Beer. 2003. Characterization and comparison of recombinant simian immunodeficiency virus from drill (Mandrillus leucophaeus) and mandrill (Mandrillus sphinx) isolates. J. Virol. 77:4867-4880.
16. Huelsenbeck, J. P., and F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
17. Langley, R. J., V. M. Hirsch, S. J. O'Brien, D. Adger-Johnson, R. M. Goeken, and R. A. Olmsted. 1994. Nucleotide sequence analysis of puma lentivirus (PLV-14): genomic organization and relationship to other lentiviruses. Virology. 202:853-864.
18. Leutenegger, C. M., R. Hoffmann-Lehmann, C. Riols, M. Liberek, G. Worel, P. Lups, D. Fehr, M. Hartmann, P. Wellenmann, and H. Lutz. 1999. Viral infections in free-living populations of the European wildcat. J. Wildl. Dis. 35:678-686.
19. Lutz, H., E. Isenbügel, R. Lehmann, R. H. Sabapara, and C. Wolfensberger. 1992. Retrovirus infection in non-domestic felids: serological studies and attempts to isolate a lentivirus. Vet. Immunol. Immunopathol. 35:215-224.
20. Nishimura, Y., Y. Goto, K. Yoneda, Y. Endo, T. Mzuno, M. Hamachi, H. Maruyama, H. Kinoshita, S. Koga, M. Komori, s. Fushuku, K. Ushinohama, M. Akuzawa, T. Watari, A. Hasegawa, and H. Tsujimoto. 1999. Interspecies transmission of feline immunodeficiency virus from domestic cat to the Tsushima cat (Fells bengalensis euptilura) in the wild. J. Virol. 73:7916-7921.
21. Olmstead, R. A., R. Langley, M. E. Roelke, R. M. Goeken, D. Adger-Johnson, J. P. Goff, J. P. Albert, C. Packer, M. K. Laurenson, T. M. Caro, L. Scheepers, D. E. Wildt, M. Bush, J. S. Martenson, and S. J. O'Brien. 1992. Worldwide prevalence of lentivirus infection in wild feline species: epidemiologic and phylogenetie aspects. J. Virol. 66:6008-6018.
22. Osborne, R., M. Rigby, K. Siebelink, J. C. Neil, and O. Jarrett. 1994. Virus neutralization reveals antigenic variation among feline immunodeficiency virus isolates. J. Gen. Virol. 75:3641-3645.
23. Osofsky, S. A., K. J. Hirsch, E. E. Zuckerman, and W. D. Hardy. 1996. Feline lentivirus and feline oncovirus status of free-ranging lions (Panthera leo), leopards (Panthera pardus), and cheetahs (Acinonyx jubatus) in Botswana: a regional perspective. J. Zool. Wildl. Med. 27:453-467.
24. Packer, C., S. Altizer, M. Appel, E. Brown, J. Martenson, S. J. O'Brien, M. Roelke-Parker, R. Hofmann-Lehmann, and H. Lutz. 1999. Viruses of the Serengeti: patterns of infection and mortality in African lions. J. Anim. Ecol. 68:1161-1178.
25. Pearks Wilkerson, A. J., E. C. Teeling, J. L. Troyer, G. Kahila Bar-Gal, M. E. Roelke, L. Marker, J. Pecon-Slattery, and S. J. O'Brien. 2004. Coronavirus outbreak in cheetahs: lessons for SARS. Curr. Biol. 14:R227-R228.
26. Pedersen, N. C., E. W. Ho, M. L. Brown, and E. W. Yamamoto. 1987. Isolation of a T-lymphotropic virus from domestic cats with an immunodeficiency-like syndrome. Science 235:790-793.
27. Peeters, M., V. Courgnaud, B. Abela, P. Auzel, X. Pourrut, F. Bibollet-Ruche, S. Loul, F. Liegeois, C. Butel, D. Koulagna, E. Mpoudi-Ngole, G. M. Shaw, B. H. Hahn, and E. Delaporte. 2002. Risk to human health from a plethora of simian immunodeficiency viruses in primate bushmeat. Emerg. Infect. Dis. 8:451-457.
28. Posada, D., and K. A. Crandall. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818.
29. Rigby, M. A., E. C. Holmes, M. Pistello, A. Mackay, A. J. L. Brown, and J. C. Neil. 1993. Evolution of structural proteins of feline immunodeficiency virus: molecular epidemiology and evidence of selection for change. J. Gen. Virol. 74:425-436.
30. Roelke-Parker, M. E., L. Munson, C. Packer, R. Kock, S. Cleveland, M. Carpenter, S. J. O'Brien, A. Popsichiel, R. Hofmann-Lehmann, H. Lutz, G. L. M. Mwamengele, M. N. Mgasa, G. A. Machange, B. A. Summers, and M. J. G. Appel. 1996. A canine distemper virus epidemic in Serengeti lions (Panthera leo). Nature 379:441-445.
31. Souquière, S., F. Bibollet-Ruche, D. L. Robertson, M. Makuwa, C. Apetrei, R. Onanga, C. Kornfeld, J. C. Plantier, F. Gao, K. Abernethy, L. J. White, W. Karesh, P. Telfer, E. J. Wickings, P. Mauclere, P. A. Marx, F. Barré-Sinoussi, B. H. Hahn, M. C. Müller-Trutwin, and F. Simon. 2001. Wild Mandrillus sphinx are carriers of two types of lentivirus. J. Virol. 75:7086-7096.
32. Swofford, D. L. 1998. PAUP*; phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer Associates, Sunderland, Mass.
33. Tatusova, T. A., and T. L. Madden. 1999. Blast 2 sequences: a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 174: 247-250.
34. Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmough, and D. G. Higgins. 1997. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided quality analysis tools. Nucleic Acids Res. 25:4876-4882.
35. Troyer, J. L., J. Pecon-Slattery, M. E. Roelke, L. Black, C. Packer, and S. J. O'Brien. 2004. Patterns of feline immunodeficiency virus multiple infection and genome divergence in a free-ranging population of African lions. J. Virol. 78:3777-3791.
36. VandeWoude, S., S. J. O'Brien, K. Langelier, W. D. Hardy, J. P. Slattery, E. E. Zuckerman, E. A. Hoover. 1997. Growth of lion and puma lentiviruses in domestic cat cells and comparisons with FIV. Virology 233:185-192.
37. Willett, B. J., J. N. Flynn, and M. J. Hosie. 1999. FIV infection in domestic cats: an animal model for AIDS. Immunol. Today 18:182-189.
38. Yamaguchi, N., D. W. MacDonald, W. C. Passanisi, D. A. Harbour, and C. D. Hopper. 1996. Parasite prevalence in free-ranging farm cats, Felis silvesttris catus. Epidemiol. Infect. 116:217-223.