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Volumn 6, Issue 6, 2005, Pages 992-996

2′/3′-O-peptidyl adenosine as a general base catalyst of its own external peptidyl transfer: Implications for the ribosome catalytic mechanism

(13) Changalov, Mohamed M a Ivanova, Gabriela D a Rangelov, Miroslav A a Acharya, Parag b Acharya, Sandipta b Minakawa, Noriaki c Földesi, András b Stoineva, Ivanka B a Yomtova, Vihra M a Roussev, Christo D d Matsuda, Akira c Chattopadhyaya, Jyoti b Petkov, Dimiter D a

a INSTITUTE OF ORGANIC CHEMISTRY (Bulgaria)

b UPPSALA UNIVERSITY (Sweden)

c HOKKAIDO UNIVERSITY (Japan)

d GOETHE UNIVERSITY (Germany)

Author keywords

Catalysis; Neighboring group effects; Reaction mechanisms; Ribosomes; Transesterification

Indexed keywords

2',3' O PEPTIDYLADENOSINE; ADENOSINE; AMINOACYL TRANSFER RNA; AMINOACYL TRANSFER RNA A76; PEPTIDE; PEPTIDYLTRANSFERASE; UNCLASSIFIED DRUG; PROTON; RIBOZYME;

ARTICLE; CATALYSIS; CATALYST; CHEMICAL PHENOMENA; DEGRADATION; ETHANOLYSIS; NEIGHBORING GROUP EFFECT; PRIORITY JOURNAL; PROTON TRANSPORT; REACTION ANALYSIS; RIBOSOME; TRANSESTERIFICATION; CHEMISTRY; ESTERIFICATION; GENETICS; HYDROGEN BOND; KINETICS; METABOLISM;

ADENOSINE; CATALYSIS; ESTERIFICATION; HYDROGEN BONDING; KINETICS; PEPTIDES; PEPTIDYL TRANSFERASES; PROTONS; RIBOSOMES; RNA, CATALYTIC;

EID: 20644434704 PISSN: 14394227 EISSN: None Source Type: Journal
DOI: 10.1002/cbic.200400349 Document Type: Article

Times cited : (29)

References (34)

1
- 20644440861
- a) S. M. Hecht, Tetrahedron 1977, 33, 1671 - 1696;
- (1977) Tetrahedron , vol.33 , pp. 1671-1696
- Hecht, S.M.¹

2
- 12644312611
- b) Chládek, M. Sprinzl, Angew. Chem. 1985, 97, 377-398;
- (1985) Angew. Chem. , vol.97 , pp. 377-398
- Chládek¹ Sprinzl, M.²

3
- 84985556539
- Angew. Chem. Int. Ed. Engl. 1985, 24, 371-391.
- (1985) Angew. Chem. Int. Ed. Engl. , vol.24 , pp. 371-391

4
- 1542485133
- a) H. G. Zachau, W. Karau, Chem. Ber. 1960, 93, 1830-1839;
- (1960) Chem. Ber. , vol.93 , pp. 1830-1839
- Zachau, H.G.¹ Karau, W.²

5
- 7544231577
- b) B. E. Griffin, C. B. Reese, Proc. Natl. Acad. Sci. USA 1964, 51, 440-444.
- (1964) Proc. Natl. Acad. Sci. USA , vol.51 , pp. 440-444
- Griffin, B.E.¹ Reese, C.B.²

6
- 0036863388
- a) S. Dorner, N. Polacek, U. Schulmeister, C. Panuschka, A. Barta, Biochem. Soc. Trans. 2002, 30, 1131-1136;
- (2002) Biochem. Soc. Trans. , vol.30 , pp. 1131-1136
- Dorner, S.¹ Polacek, N.² Schulmeister, U.³ Panuschka, C.⁴ Barta, A.⁵

7
- 0037069377
- b) S. I. Chamberlin, E. J. Merino, K. M. Weeks, Proc. Natl. Acad. Sci. USA 2002, 99, 14688-14693;
- (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 14688-14693
- Chamberlin, S.I.¹ Merino, E.J.² Weeks, K.M.³

8
- 0345099498
- c) S. Dorner, C. Panuschka, W. Schmid, A. Bartha, Nucleic Acids Res. 2003, 31, 6536-6542.
- (2003) Nucleic Acids Res. , vol.31 , pp. 6536-6542
- Dorner, S.¹ Panuschka, C.² Schmid, W.³ Bartha, A.⁴

9
- 0037015037
- J. L. Hansen, T. M. Schmeling, P. B. Moore, T. A. Stetz, Proc. Natl. Acad. Sci. USA 2002, 99, 11670-11675.
- (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 11670-11675
- Hansen, J.L.¹ Schmeling, T.M.² Moore, P.B.³ Stetz, T.A.⁴

10
- 0020069555
- a) T. Wagner, F. Cramer, M. Sprinzl, Biochemistry 1982, 21, 1521-1529;
- (1982) Biochemistry , vol.21 , pp. 1521-1529
- Wagner, T.¹ Cramer, F.² Sprinzl, M.³

11
- 0034637161
- b) P. Nissen, J. Hansen, N. Ban, P. B. Moore, T. A. Steitz Science 2000, 289, 920-930;
- (2000) Science , vol.289 , pp. 920-930
- Nissen, P.¹ Hansen, J.² Ban, N.³ Moore, P.B.⁴ Steitz, T.A.⁵

12
- 2542564300
- c) A. Sievers, M. Beringer, M. V. Rodnina, R. Wolfenden, Proc. Natl. Acad. Sci. USA 2004, 101, 7897-7901;
- (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 7897-7901
- Sievers, A.¹ Beringer, M.² Rodnina, M.V.³ Wolfenden, R.⁴

13
- 2542470615
- d) E. M. Youngman, J. L. Brunelle, A. B. Kochaniak, R. Green, Cell 2004, 117, 589-599.
- (2004) Cell , vol.117 , pp. 589-599
- Youngman, E.M.¹ Brunelle, J.L.² Kochaniak, A.B.³ Green, R.⁴

14
- 0034812442
- I. Velikyan, S. Acharya, A. Trifonova, A. Foldesi, J. Chattopadhyaya, J. Am. Chem. Soc. 2001, 122, 2893-2894.
- (2001) J. Am. Chem. Soc. , vol.122 , pp. 2893-2894
- Velikyan, I.¹ Acharya, S.² Trifonova, A.³ Foldesi, A.⁴ Chattopadhyaya, J.⁵

15
- 0014938778
- E. Scolnick, G. Milman, M. Rosman, T. Caskey, Nature 1970, 225, 152-154.
- (1970) Nature , vol.225 , pp. 152-154
- Scolnick, E.¹ Milman, G.² Rosman, M.³ Caskey, T.⁴

16
- 0001349638
- K. H. Nierhaus, H. Schulze, B. S. Cooperman, Biochem. Int. 1980, 1, 185-192.
- (1980) Biochem. Int. , vol.1 , pp. 185-192
- Nierhaus, K.H.¹ Schulze, H.² Cooperman, B.S.³

17
- 20644468854
- note
- R values is found in the Supporting Information.

18
- 0028106961
- J. Plavec, C. Thibaudeau, J. Chattopadhyaya. J. Am. Chem. Soc. 1994, 116, 6558-6560.
- (1994) J. Am. Chem. Soc. , vol.116 , pp. 6558-6560
- Plavec, J.¹ Thibaudeau, C.² Chattopadhyaya, J.³

19
- 0003719912
- Springer, New York
- H. Dugas, C. Penney, Bioorganic Chemistry, Springer, New York, 1981, p. 100.
- (1981) Bioorganic Chemistry , pp. 100
- Dugas, H.¹ Penney, C.²

20
- 0000663213
- W. P. Jencks, J. Carriuolo, J. Am. Chem. Soc. 1961, 83, 1743-1751.
- (1961) J. Am. Chem. Soc. , vol.83 , pp. 1743-1751
- Jencks, W.P.¹ Carriuolo, J.²

21
- 0036161375
- G. Ivanova, E. Bratovanova, D. Petkov, J. Pept. Sci. 2002, 8, 8-12.
- (2002) J. Pept. Sci. , vol.8 , pp. 8-12
- Ivanova, G.¹ Bratovanova, E.² Petkov, D.³

22
- 0014949428
- J. Pitha, Biochemistry 1970, 9, 3678-3682.
- (1970) Biochemistry , vol.9 , pp. 3678-3682
- Pitha, J.¹

23
- 0006244089
- M. R. Siggel, T. Darrah Thomas, J. Am. Chem. Soc. 1986, 108, 4360-4363.
- (1986) J. Am. Chem. Soc. , vol.108 , pp. 4360-4363
- Siggel, M.R.¹ Darrah Thomas, T.²

24
- 7544220590
- J. S. Weinger, K. M. Parnell, S. Dorner, R. Green, S. A. Strobel Nat. Struct. Mol. Biol. 2004, 11, 1101-1106.
- (2004) Nat. Struct. Mol. Biol. , vol.11 , pp. 1101-1106
- Weinger, J.S.¹ Parnell, K.M.² Dorner, S.³ Green, R.⁴ Strobel, S.A.⁵

25
- 0033592361
- G. K. Das, D. Bhatacharyya, D. P. Burma, J. Theor. Biol. 1999, 200, 193-205.
- (1999) J. Theor. Biol. , vol.200 , pp. 193-205
- Das, G.K.¹ Bhatacharyya, D.² Burma, D.P.³

26
- 0003818541
- Freeman, New York
- A. R. Fersht, Structure and Mechanism in Protein Science, 1999, Freeman, New York, p. 475.
- (1999) Structure and Mechanism in Protein Science , pp. 475
- Fersht, A.R.¹

27
- 15244353731
- J. De Jersey, A. K. Fihelly, B. Zerner, Bioorg. Chem. 1980, 9, 153-162.
- (1980) Bioorg. Chem. , vol.9 , pp. 153-162
- De Jersey, J.¹ Fihelly, A.K.² Zerner, B.³

28
- 0000932115
- S. A. Robertson, J. A. Ellman, P. G. Schultz, J. Am. Chem. Soc. 1991, 113, 2722-2729.
- (1991) J. Am. Chem. Soc. , vol.113 , pp. 2722-2729
- Robertson, S.A.¹ Ellman, J.A.² Schultz, P.G.³

29
- 0001120142
- J. Plavec, W. Tong, J. Chattopadhyaya, J. Am. Chem. Soc. 1993, 115, 9734-9746.
- (1993) J. Am. Chem. Soc. , vol.115 , pp. 9734-9746
- Plavec, J.¹ Tong, W.² Chattopadhyaya, J.³

30
- 0027519129
- N. Minakawa, N. Kojima, A. Matsuda, Tetrahedron 1993, 49, 557-570.
- (1993) Tetrahedron , vol.49 , pp. 557-570
- Minakawa, N.¹ Kojima, N.² Matsuda, A.³

31
- 0030561372
- A. Al Mourabit, M. Beckmann, C. Poupat, A. Ahond, P. Potier, Tetrahedron: Asymmetry 1996, 7, 3455-3464.
- (1996) Tetrahedron: Asymmetry , vol.7 , pp. 3455-3464
- Al Mourabit, A.¹ Beckmann, M.² Poupat, C.³ Ahond, A.⁴ Potier, P.⁵

32
- 0021825509
- L. W. McLaughlin, N. Piel, T. Hellmann, Synthesis, 1985, 1-5, 322-323.
- (1985) Synthesis , vol.1-5 , pp. 322-323
- McLaughlin, L.W.¹ Piel, N.² Hellmann, T.³

33
- 0000519942
- K. T. Leffek, P. Pruszynski, K. Thanapaalasinham, Can. J. Chem. 1989, 67, 590-595.
- (1989) Can. J. Chem. , vol.67 , pp. 590-595
- Leffek, K.T.¹ Pruszynski, P.² Thanapaalasinham, K.³

34
- 0035895391
- H.-s. Kim, T. D. Chung, H. Kim, J. Electroanal. Chem. 2001, 498, 209-215.
- (2001) J. Electroanal. Chem. , vol.498 , pp. 209-215
- Kim, H.-S.¹ Chung, T.D.² Kim, H.³

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