Structure of allelic variants of subtype 5 of histone H1 in pea Pisum sativum L.

Heredity

Volumn 94, Issue 6, 2005, Pages 582-588

  Bogdanova, V S ^a   Lester, D R ^b   Berdnikov, V A ^a   Andersson, I ^c  

^a INSTITUTE OF CYTOLOGY AND GENETICS   (Russian Federation)

^b UPPSALA UNIVERSITY   (Sweden)

^c SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

Author keywords

Allelic variants; Histone H1; Pea; Pisum sativum

Indexed keywords

HISTONE; ISOPROTEIN; PLANT DNA;

GENOME;

ALLELE; AMINO ACID SEQUENCE; ARTICLE; BINDING SITE; CHEMISTRY; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PEA; POLYACRYLAMIDE GEL ELECTROPHORESIS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY;

ALLELES; AMINO ACID SEQUENCE; BINDING SITES; DNA, PLANT; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HISTONES; MOLECULAR SEQUENCE DATA; PEAS; PROTEIN ISOFORMS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; VARIATION (GENETICS);

PISUM SATIVUM; SATIVUM;

EID: 20444487430     PISSN: 0018067X     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.hdy.6800650     Document Type: Article

References (30)

1. Belyaev AI, Berdnikov VA (1985). Intraspecific polymorphism of H1 histone of the wild Fabaceae species. Genetika (USSR) 21: 605-613 (in Russian).
2. Berdnikov VA, Gorel FL (1975). A study of ratios between histone fractions. Mol Biol (USSR) 9: 699-705 (in Russian).
3. Berdnikov VA, Bogdanova VS, Gorel FL, Rozov SM (1992). Territorial distribution of histone H1 alleles in a population of Vicia unijuga A. Br. formed after urbanization of natural habitat. Can J Bot 70: 1591-1595.
4. Berdnikov VA, Rozov SM, Temnykh SV, Gorel FL, Kosterin OE (1993a). Adaptive nature of interspecies variation of histone H1 in insects. J Mol Evol 36: 497-507.
5. Berdnikov VA, Bogdanova VS, Rozov SM, Kosterin OE (1993b). The geographic patterns of histone H1 allelic frequencies formed in the course of pea (Pisum sativum L.) cultivation. Heredity 71: 199-209.
6. Berdnikov VA, Gorel FL, Bogdanova VS, Kosterin OE, Trusov YA, Rozov SM (1999). Effect of a substitution of a short chromosome segment carrying a histone H1 locus on expression of the homeotic gene Tl in heterozygote in the garden pea Pisum sativum L. Genet Res 73: 93-109.
7. Berdnikov VA, Bogdanova VS, Gorel FL, Kosterin OE, Trusov YA (2003). Large changes in the structure of the major histone H1 subtype result in small effects on quantitative traits in legumes. Genetica 119: 167-182.
8. Bogdanova VS, Rozov SM, Trusov YA, Berdnikov VA (1994). Phenotypic effect of substitutions of short chromosomal segments containing different alleles of histone H1 genes in garden pea (Pisum sativum L.). Genet Res 64: 35-41.
9. De Lucia F, Faraone-Mennella MR, D'Erme M, Quesada P, Caiafa P, Farina B (1994). Histone-induced condensation of rat testis chromatin: testis-specific Hit versus somatic H1 variants. Biochem Biophys Res Commun 198: 32-39.
10. Ellis THN (1994). Approaches to the genetic mapping of pea. In: Linskens H-F, Jackson JF (eds) Modern Methods of Plant Analysis. Vegetables and Vegetable Products. Springer-Verlag: Berlin Vol 16, pp 117-160.
11. Gantt JS, Key JL (1987). Molecular cloning of a pea H1 histone cDNA. Eur J Biochem 166: 119-125.
12. Hendzel MJ, Lever MA, Crawford E, Th'ng JPH (2004). The C-terminal domain is the primary determinant of histone H1 binding to chromatin in vivo. J Biol Chem 279: 20028-20034.
13. Johns EW (1964). Studies of histones. 7. Preparative methods for histone fractions from calf thymus. Biochem J 92: 55-59.
14. Kimura M (1983). The Neutral Theory of Molecular Evolution. Cambridge University Press: Cambridge.
15. Kosterin OE, Bogdanova VS, Gorel FL, Rozov SM, Trusov YA, Berdnikov VA (1994). Histone H1 of the garden pea (Pisum sativum L.); composition, developmental changes, allelic polymorphism and inheritance. Plant Sci 101: 189-202.
16. Kumar S, Tamura K, Jakobsen IB, Nei M (2001). MEGA2: Molecular Evolutionary Genetics Analysis Software. Arizona State University: Tempe, AZ, USA.
17. Liao LW, Cole RD (1981). Differences among subfractions of H1 histone in their interactions with linear and superhelical DNA. Circular dichroism. J Biol Chem 256: 6751-6755.
18. Moniz de Sa M, Drouin G (1996). Phylogeny and substitution rates of angiosperm actin genes. Mol Biol Evol 13: 1198-1212.
19. Panyim S, Chalkley R (1969). High resolution acrylamide gel electrophoresis of histones. Arch Biochem Biophys 130: 337-346.
20. Ponte I, Vila R, Suau P (2003). Sequence complexity of histone H1 subtypes. Mol Biol Evol 20: 371-380.
21. Rozov SM, Bogdanova VS, Berdnikov VA (1986). Different chromosomal localizations of genes coding for Pisum histone H1 fractions. Genetika (USSR) 22: 2159-2166 (in Russian).
22. Schulze E, Trieschmann L, Schulze B, Schmidt ER, Pitzel S, Zechel K et al (1993). Structural and functional differences between histone H1 sequence variants with differential intranuclear distribution. Proc Natl Acad Sci USA 90: 2 481-2485.
23. Stein GS, Stein JL, Marzluff WF (eds) (1984). Histone genes: Structure, Organization, and Regulation. John Wiley & Sons: New York.
24. Tanaka I, Akahori Y, Gomi K, Suzuki T, Ueda K (1999). A novel histone variant localized in nucleoli of higher plant cells. Chromosoma 108: 190-199.
25. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997). The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl Acids Res 24: 4876-4882.
26. Trieschmann L, Schulze E, Schulze B, Grossbach U (1997). The histone H1 genes of the dipteran insect, Chironomus thummi, fall under two divergent classes and encode proteins with distinct intranuclear distribution and potentially different functions. Eur J Biochem 250: 184-196.
27. Trusov YA, Bogdanova VS, Berdnikov VA (1994). Recombination within the complex locus His(2-6) containing genes for five histone H1 subtypes in pea. Pisum Genet 26: 34-35.
28. van Holde KE (1988). Chromatin. Springer Verlag: New York.
29. Wolffe AP, Khochbin S, Dimitrov S (1997). What do linker histones do in chromatin? BioEssays 19: 249-255.
30. Woo HH, Brigham LA, Hawes MC (1995). Molecular cloning and expression of mRNAs encoding H1 histone and an H1 histone-like sequences in root tips of pea (Pisum sativum L.). Plant Mol Biol 28: 1143-1147.