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Volumn 352, Issue 1-2, 2005, Pages 100-108

Intragenomic spliced leader RNA array analysis of kinetoplastids reveals unexpected transcribed region diversity in Trypanosoma cruzi

Author keywords

Concerted evolution; Gene array; Leishmania major; Mini exon gene; Phylogeny

Indexed keywords

ARTICLE; CLUSTER ANALYSIS; FLAGELLATE; GENE MUTATION; LEISHMANIA MAJOR; MOLECULAR EVOLUTION; NUCLEOTIDE SEQUENCE; PREDICTION; PRIORITY JOURNAL; PROTOZOAL GENETICS; RNA ANALYSIS; RNA SEQUENCE; RNA SPLICING; TAXONOMIC IDENTIFICATION; TRYPANOSOMA CRUZI;

EID: 20444389761     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2005.04.002     Document Type: Article
Times cited : (33)

References (29)
  • 1
    • 0023491481 scopus 로고
    • Multiple copies of a retroposon interrupt spliced leader RNA genes in the African trypanosome, Trypanosoma gambiense
    • S. Aksoy, T.M. Lalor, J. Martin, L.H. Van der Ploeg, and F.F. Richards Multiple copies of a retroposon interrupt spliced leader RNA genes in the African trypanosome, Trypanosoma gambiense EMBO J. 6 1987 3819 3826
    • (1987) EMBO J. , vol.6 , pp. 3819-3826
    • Aksoy, S.1    Lalor, T.M.2    Martin, J.3    Van Der Ploeg, L.H.4    Richards, F.F.5
  • 2
    • 0026508127 scopus 로고
    • Spliced leader RNA sequences of Trypanosoma rangeli are organized within the 5S rRNA-encoding genes
    • S. Aksoy, G.L. Shay, M.S. Villanueva, C.B. Beard, and F.F. Richards Spliced leader RNA sequences of Trypanosoma rangeli are organized within the 5S rRNA-encoding genes Gene 113 1992 239 243
    • (1992) Gene , vol.113 , pp. 239-243
    • Aksoy, S.1    Shay, G.L.2    Villanueva, M.S.3    Beard, C.B.4    Richards, F.F.5
  • 3
    • 0034653315 scopus 로고    scopus 로고
    • Overexpression of miniexon gene decreases virulence of Leishmania major in BALB/c mice in vivo
    • S. Antoniazi, H.C. Lima, and A.K. Cruz Overexpression of miniexon gene decreases virulence of Leishmania major in BALB/c mice in vivo Mol. Biochem. Parasitol. 107 2000 57 69
    • (2000) Mol. Biochem. Parasitol. , vol.107 , pp. 57-69
    • Antoniazi, S.1    Lima, H.C.2    Cruz, A.K.3
  • 4
    • 0004806921 scopus 로고    scopus 로고
    • A phylogenetic analysis of the Trypanosoma cruzi genome project CL Brener reference strain by multilocus enzyme electrophoresis and multiprimer random amplified polymorphic DNA fingerprinting
    • S. Brisse, C. Barnabé, A.L. Bañuls, I. Sidibé, S. Noël, and M. Tibayrenc A phylogenetic analysis of the Trypanosoma cruzi genome project CL Brener reference strain by multilocus enzyme electrophoresis and multiprimer random amplified polymorphic DNA fingerprinting Mol. Biochem. Parasitol. 92 1998 253 263
    • (1998) Mol. Biochem. Parasitol. , vol.92 , pp. 253-263
    • Brisse, S.1    Barnabé, C.2    Bañuls, A.L.3    Sidibé, I.4    Noël, S.5    Tibayrenc, M.6
  • 5
    • 0024280271 scopus 로고
    • Trans splicing involves a novel form of small nuclear ribonucleoprotein particles
    • J.P. Bruzik, K. Van Doren, D. Hirsh, and J.A. Steitz Trans splicing involves a novel form of small nuclear ribonucleoprotein particles Nature 335 1988 559 562
    • (1988) Nature , vol.335 , pp. 559-562
    • Bruzik, J.P.1    Van Doren, K.2    Hirsh, D.3    Steitz, J.A.4
  • 6
    • 0242402131 scopus 로고    scopus 로고
    • Transcription in kinetoplastid protozoa: Why be normal?
    • D.A. Campbell, S. Thomas, and N.R. Sturm Transcription in kinetoplastid protozoa: why be normal? Microbes Infect. 5 2003 1231 1240
    • (2003) Microbes Infect. , vol.5 , pp. 1231-1240
    • Campbell, D.A.1    Thomas, S.2    Sturm, N.R.3
  • 7
    • 4444373038 scopus 로고    scopus 로고
    • The determinants of Chagas disease: Connecting parasite and host genetics
    • D.A. Campbell, S.J. Westenberger, and N.R. Sturm The determinants of Chagas disease: connecting parasite and host genetics Curr. Mol. Med. 4 2004 549 562
    • (2004) Curr. Mol. Med. , vol.4 , pp. 549-562
    • Campbell, D.A.1    Westenberger, S.J.2    Sturm, N.R.3
  • 8
    • 2442538807 scopus 로고    scopus 로고
    • Spliced leader RNA gene promoter sequence heterogeneity in CL-Brener Trypanosoma cruzi reference strain
    • P. Cribb, E. Tapia, P. Diosque, and E. Serra Spliced leader RNA gene promoter sequence heterogeneity in CL-Brener Trypanosoma cruzi reference strain Infect. Genet. Evol. 4 2004 153 157
    • (2004) Infect. Genet. Evol. , vol.4 , pp. 153-157
    • Cribb, P.1    Tapia, E.2    Diosque, P.3    Serra, E.4
  • 9
    • 0035076676 scopus 로고    scopus 로고
    • The spliced leader RNA gene array in phloem-restricted plant trypanosomatids (Phytomonas) partitions into two major groupings: Epidemiological implications
    • M. Dollet, N.R. Sturm, and D.A. Campbell The spliced leader RNA gene array in phloem-restricted plant trypanosomatids (Phytomonas) partitions into two major groupings: epidemiological implications Parasitology 122 2001 289 297
    • (2001) Parasitology , vol.122 , pp. 289-297
    • Dollet, M.1    Sturm, N.R.2    Campbell, D.A.3
  • 11
    • 0037468185 scopus 로고    scopus 로고
    • Mechanism of genetic exchange in American trypanosomes
    • M.W. Gaunt Mechanism of genetic exchange in American trypanosomes Nature 421 2003 936 939
    • (2003) Nature , vol.421 , pp. 936-939
    • Gaunt, M.W.1
  • 12
    • 0033967817 scopus 로고    scopus 로고
    • Intragenomic variation within ITS1 and ITS2 of freshwater crayfishes (Decapoda: Cambaridae): implications for phylogenetic and microsatellite studies
    • D.J. Harris, and K.A. Crandall Intragenomic variation within ITS1 and ITS2 of freshwater crayfishes (Decapoda: Cambaridae): implications for phylogenetic and microsatellite studies Mol. Biol. Evol. 17 2000 284 291
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 284-291
    • Harris, D.J.1    Crandall, K.A.2
  • 13
    • 0024554055 scopus 로고
    • Structural alterations of chromosome 2 in Leishmania major as evidence for diploidy, including spontaneous amplification of the mini-exon array
    • D.M. Iovannisci, and S.M. Beverley Structural alterations of chromosome 2 in Leishmania major as evidence for diploidy, including spontaneous amplification of the mini-exon array Mol. Biochem. Parasitol. 34 1989 177 188
    • (1989) Mol. Biochem. Parasitol. , vol.34 , pp. 177-188
    • Iovannisci, D.M.1    Beverley, S.M.2
  • 14
    • 0033525731 scopus 로고    scopus 로고
    • Developmental regulation of spliced leader RNA gene in Leishmania donovani amastigotes is mediated by specific polyadenylation
    • J. Lamontagne, and B. Papadopoulou Developmental regulation of spliced leader RNA gene in Leishmania donovani amastigotes is mediated by specific polyadenylation J. Biol. Chem. 274 1999 6602 6609
    • (1999) J. Biol. Chem. , vol.274 , pp. 6602-6609
    • Lamontagne, J.1    Papadopoulou, B.2
  • 15
    • 0141955818 scopus 로고    scopus 로고
    • DNA molecules and configurations in a solid-state nanopore microscope
    • J. Li, M. Gershow, D. Stein, E. Brandin, and J.A. Golovchenko DNA molecules and configurations in a solid-state nanopore microscope Nat. Mater. 2 2003 611 615
    • (2003) Nat. Mater. , vol.2 , pp. 611-615
    • Li, J.1    Gershow, M.2    Stein, D.3    Brandin, E.4    Golovchenko, J.A.5
  • 16
    • 0037144435 scopus 로고    scopus 로고
    • On the role of exon and intron sequences in trans-splicing utilization and cap 4 modification of the trypanosomatid Leptomonas collosoma SL RNA
    • M. Mandelboim, C.L. Estraño, C. Tschudi, E. Ullu, and S. Michaeli On the role of exon and intron sequences in trans-splicing utilization and cap 4 modification of the trypanosomatid Leptomonas collosoma SL RNA J. Biol. Chem. 277 2002 35210 35218
    • (2002) J. Biol. Chem. , vol.277 , pp. 35210-35218
    • Mandelboim, M.1    Estraño, C.L.2    Tschudi, C.3    Ullu, E.4    Michaeli, S.5
  • 17
    • 0024450303 scopus 로고
    • Characterization of the spliced leader genes and transcripts in Trypanosoma cruzi
    • C. McCarthy-Burke, Z.A. Taylor, and G.A. Buck Characterization of the spliced leader genes and transcripts in Trypanosoma cruzi Gene 82 1989 177 189
    • (1989) Gene , vol.82 , pp. 177-189
    • McCarthy-Burke, C.1    Taylor, Z.A.2    Buck, G.A.3
  • 18
    • 0026876316 scopus 로고
    • PCR amplification of mini-exon genes differentiates Trypanosoma cruzi from Trypanosoma rangeli
    • V.K. Murthy, K.M. Dibbern, and D.A. Campbell PCR amplification of mini-exon genes differentiates Trypanosoma cruzi from Trypanosoma rangeli Mol. Cell. Probes 6 1992 237 243
    • (1992) Mol. Cell. Probes , vol.6 , pp. 237-243
    • Murthy, V.K.1    Dibbern, K.M.2    Campbell, D.A.3
  • 19
    • 0030940448 scopus 로고    scopus 로고
    • The transcription promoter of the spliced leader gene from Trypanosoma cruzi
    • L.R. Nunes, M.R. Carvalho, A.M. Shakarian, and G.A. Buck The transcription promoter of the spliced leader gene from Trypanosoma cruzi Gene 188 1997 157 168
    • (1997) Gene , vol.188 , pp. 157-168
    • Nunes, L.R.1    Carvalho, M.R.2    Shakarian, A.M.3    Buck, G.A.4
  • 20
    • 2542457587 scopus 로고    scopus 로고
    • Diversity of insect trypanosomatids assessed from the spliced leader RNA and 5S rRNA genes and intergenic regions
    • S.A. Podlipaev Diversity of insect trypanosomatids assessed from the spliced leader RNA and 5S rRNA genes and intergenic regions J. Eukaryot. Microbiol. 51 2004 283 290
    • (2004) J. Eukaryot. Microbiol. , vol.51 , pp. 283-290
    • Podlipaev, S.A.1
  • 22
    • 0033516650 scopus 로고    scopus 로고
    • The role of intron structures in trans-splicing and cap 4 formation for the Leishmania spliced leader RNA
    • N.R. Sturm, and D.A. Campbell The role of intron structures in trans-splicing and cap 4 formation for the Leishmania spliced leader RNA J. Biol. Chem. 274 1999 19361 19367
    • (1999) J. Biol. Chem. , vol.274 , pp. 19361-19367
    • Sturm, N.R.1    Campbell, D.A.2
  • 23
    • 14444278049 scopus 로고    scopus 로고
    • Efficient trans-splicing of mutated spliced leader exons in Leishmania tarentolae
    • N.R. Sturm, J. Fleischmann, and D.A. Campbell Efficient trans-splicing of mutated spliced leader exons in Leishmania tarentolae J. Biol. Chem. 273 1998 18689 18692
    • (1998) J. Biol. Chem. , vol.273 , pp. 18689-18692
    • Sturm, N.R.1    Fleischmann, J.2    Campbell, D.A.3
  • 24
    • 0032951485 scopus 로고    scopus 로고
    • Transcription termination and 3′-end processing of the spliced leader RNA in kinetoplastids
    • N.R. Sturm, M.C. Yu, and D.A. Campbell Transcription termination and 3′-end processing of the spliced leader RNA in kinetoplastids Mol. Cell. Biol. 19 1999 1595 1604
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 1595-1604
    • Sturm, N.R.1    Yu, M.C.2    Campbell, D.A.3
  • 26
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • J.D. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res. 25 1997 4876 4882
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 27
    • 0029098368 scopus 로고
    • Population genetics of parasitic protozoa and other microorganisms
    • M. Tibayrenc Population genetics of parasitic protozoa and other microorganisms Adv. Parasitol. 36 1995 47 115
    • (1995) Adv. Parasitol. , vol.36 , pp. 47-115
    • Tibayrenc, M.1
  • 28
    • 8144222729 scopus 로고    scopus 로고
    • Trypanosomatid biodiversity in Costa Rica: Genotyping of parasites from Heteroptera using the spliced leader RNA gene
    • S.J. Westenberger Trypanosomatid biodiversity in Costa Rica: genotyping of parasites from Heteroptera using the spliced leader RNA gene Parasitology 129 2004 537 547
    • (2004) Parasitology , vol.129 , pp. 537-547
    • Westenberger, S.J.1
  • 29
    • 0141532215 scopus 로고    scopus 로고
    • The Leishmania tarentolae spliced leader contains determinants for association with polysomes
    • G.M. Zeiner, N.R. Sturm, and D.A. Campbell The Leishmania tarentolae spliced leader contains determinants for association with polysomes J. Biol. Chem. 278 2003 38269 38275
    • (2003) J. Biol. Chem. , vol.278 , pp. 38269-38275
    • Zeiner, G.M.1    Sturm, N.R.2    Campbell, D.A.3


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