The Dominant white, Dun and Smoky color variants in chicken are associated with insertion/deletion polymorphisms in the PMEL17 gene

Genetics

Volumn 168, Issue 3, 2004, Pages 1507-1518

  Kerje, Susanne ^a   Sharma, Preety ^b   Gunnarsson, Ulrika ^a   Kim, Hyun ^c   Bagchi, Sonchita ^d   Fredriksson, Robert ^a   Schütz, Karin ^d   Jensen, Per ^d,e   Von Heijne, Gunnar ^c   Okimoto, Ron ^b   Andersson, Leif ^a,d,f  

^a UPPSALA UNIVERSITY   (Sweden)

^b UNIVERSITY OF ARKANSAS   (United States)

^c STOCKHOLM UNIVERSITY   (Sweden)

^d SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^e LINKÖPING UNIVERSITY   (Sweden)

^f UPPSALA UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN; PROTEIN PMEL17; UNCLASSIFIED DRUG;

ALLELE; ANIMAL TISSUE; ARTICLE; CHICKEN; CONTROLLED STUDY; DNA POLYMORPHISM; EMBRYO; EXON; FEMALE; GENE DELETION; GENE EXPRESSION; GENE INSERTION; GENETIC RECOMBINATION; LINKAGE ANALYSIS; MALE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PIGMENTATION; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

AMINO ACID SEQUENCE; ANIMALS; CHICKENS; FEATHERS; FEMALE; LINKAGE (GENETICS); MALE; MEMBRANE GLYCOPROTEINS; MICROSOMES; MOLECULAR SEQUENCE DATA; PIGMENTATION; POLYMORPHISM, GENETIC; PROTEIN STRUCTURE, SECONDARY; PROTEINS; SEQUENCE ANALYSIS, DNA; SEQUENCE DELETION;

ANIMALIA; GALLIFORMES; GALLUS GALLUS; INSERTION SEQUENCES;

EID: 19944361828     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: 10.1534/genetics.104.027995     Document Type: Article

References (26)

1. BATESON, W., 1902 Experiments with poultry. Rep. Evol. Commun. Roy. Soc. 1: 87-124.
2. BERSON, J. F., D. C. HARPER, D. TENZA, G. RAPOSO and M. S. MARKS, 2001 Pmel17 initiates premelanosome morphogenesis within multivesicular bodies. Mol. Biol. Cell 12: 3451-3464.
3. BERSON, J. F., A. C. THEOS, D. C. HARPER, D. TENZA, G. RAPOSO et al., 2003 Proprotein convertase cleavage liberates a fibrillogenic fragment of a resident glycoprotein to initiate melanosome biogenesis. J. Cell Biol. 161: 521-533.
4. BRUMBAUGH, J. A., 1971 The ultrastructural effects of the I and S loci upon black-red melanin differentiation in the fowl. Dev. Biol. 24: 392-412.
5. DU, J., A. MILLER, H. R. WIDLUND, M. A HORSTMANN, S. RAMASWAMY et al., 2003 MLANA/MART1 and SILV/PMEL17/GP100 are transcriptionally regulated by MITF in melanocytes and melanoma. Am. J. Pathol. 163: 333-343.
6. DUNNINGTON, E. A., and P. B. SIEGEL, 1996 Long-term divergent selection for eight-week body weight in White Plymouth rock chickens. Poultry Sci. 75: 1168-1179.
7. GREEN, P., K. FALLS and S. CROOK, 1990 Documentation for CRIMAP, Version 2.4. Washington University School of Medicine, St. Louis.
8. HAMMARSTROM, P., F. SCHNEIDER and J. W. KELLY, 2001 Transsuppression of misfolding in an amyloid disease. Science 293: 2459-2462.
9. HESSA, T., M. MONNÉ and G. VON HEIJNE, 2003 Stop-transfer efficiency of marginally hydrophobic segments depends on the length of the C-terminal tail. EMBO Rep. 4: 178-183.
10. HURST, C. C., 1905 Experiments with poultry. Rep. Evol. Commun. Roy. Soc. 2: 131-154.
11. JOHANSSON, M., I. M. NILSSON and G. VON HEIJNE, 1993 Positively charged amino acids placed next to a signal sequence block protein translocation more efficiently in Escherichia coli than in mammalian microsomes. Mol. Gen. Genet. 239: 251-256.
12. KERJE, S., Ö. CARLBORG, L. JACOBSSON, K. SCHÜTZ, C. HARTMANN et al., 2003a The twofold difference in adult size between the red jungle fowl and White Leghorn chickens is largely explained by a limited number of QTLs. Anim. Genet. 34: 264-274.
13. KERJE, S., J. LIND, K. SCHÜTZ, P. JENSEN and L. ANDERSSON, 2003b Melanocortin 1-receptor (MC1R) mutations are associated with plumage color in the chicken. Anim. Genet. 34: 241-248.
14. KOBAYASHI, T., W. D. VIEIRA, B. POTTERF, C. SAKAI, G. IMOKAWA et al., 1995 Modulation of melanogenic protein expression during the switch from eu- to pheomelanogenesis. J. Cell Sci. 108: 2301-2309.
15. KROGH, A., B. LARSSON, G. VON HEIJNE and E. L. L. SONNHAMMER, 2001 Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305: 567-580.
16. KUSHIMOTO, T., V. BASRUR, J. VALENCIA, J. MATSUNAGA, W. D. VIEIRA et al., 2001 A model for melanosome biogenesis based on the purification and analysis of early melanosomes. Proc. Natl. Acad. Sci. USA 98: 10698-10703.
17. MARTINEZ-ESPARZA, M., C. JIMENEZ-CERVANTES, D. C. BENNETT, J. A. LOZANO, F. SOLANO et al., 1999 The mouse silver locus encodes a single transcript truncated by the silver mutation. Mamm. Genome 10: 1168-1171.
18. MOCHII, M., K. AGATA and G. EGUCHI, 1991 Complete sequence and expression of a cDNA encoding a chicken 115-kDa melanosomal matrix protein. Pigment Cell Res. 4: 41-47.
19. lt) of light and silver (si) mice, pp. 177-183 in Pigment Cell: Phenotypic Expression in Pigment, edited by M. SEIJI. Tokyo University Press, Tokyo.
20. RUYTER-SPIRA, C. P., Z. L. GU, J. J. VAN DER POEL and M. A. M. GROENEN, 1996 Bulk segregant analysis using microsatellite: mapping the Dominant White locus in the chicken. Poultry Sci. 76: 386-391.
21. SÄÄF, A., E. WALLIN and G. VON HEIJNE, 1998 Stop-transfer function of pseudo-random amino acid segments during translocation across prokaryotic and eukaryotic membranes. Eur. J. Biochem. 251: 821-829.
22. SCHMID, M., I. NANDA, M. GUTTENBACH, C. STEINLEIN, H. HOEHN et al., 2000 First report on chicken genes and chromosomes 2000. Cytogenet. Cell Genet. 90: 169-218.
23. SILVERS, W. K., 1979 The Coat Colors of Mice: A Model for Mammalian Gene Action and Interaction. Springer-Verlag, New York.
24. SMYTH, J. R., 1990 Genetics of plumage, skin and pigmentation in chickens, pp 109-167 in Poultry Breeding and Genetics, edited by R. D. CRAWFORD. Elsevier Science, New York.
25. SOLANO, F., M. MARTINEZ-ESPERANZA, C. JIMENEZ-CERVANTES, S. P. HILL, J. A. LOZANO et al., 2000 New insight on the structure of the mouse silver locus and on the function of the silver protein. Pigment Cell Res. 13: 118-124.
26. ZIEHL, M. A., and W. F. HOLLANDER, 1987 DUN, a new plumage-color mutant at the I-locus in the fowl (Gallus gallus). Iowa State J. Res. 62: 337-342.