Fluorescence resonance energy transfer by α-helical coiled coil polypeptides in response to metal ions

Sensors and Actuators, B: Chemical

Volumn 108, Issue 1-2 SPEC. ISS., 2005, Pages 845-850

  Kashiwada, Ayumi ^a   Nakamura, Yohei ^a   Matsuda, Kiyomi ^a  

^a NIHON UNIVERSITY   (Japan)

Author keywords

Block type helical coiled coil structure; FRET; Ni2+ ion

Indexed keywords

CONFORMATIONS; FLUORESCENCE; HYDROCHLORIC ACID; HYDROPHOBICITY; NICKEL; PH EFFECTS; POLYPEPTIDES; POSITIVE IONS; PROTEINS;

BLOCK-TYPE Α-HELICAL COIL STRUCTURE; CIRCULAR DICHROISM (CD) SPECTROSCOPY; FLUORESCENCE RESONANCE ENERGY TRANSFER (FRET); NI2+ ION;

ENERGY TRANSFER;

EID: 19744375036     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2004.11.081     Document Type: Conference Paper

References (23)

1. K.T. O'Neil, and W.F. Degrado A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids Science 250 1990 646 651
2. J.C. Hu, E.K. O'Shea, P.S. Kim, and R.T. Sauer Sequence requirements for coiled-coils: analysis with lambda repressor-GCN4 leucine zipper fusions Science 250 1990 1400 1403
3. P.B. Harbury, T. Zhang, P.S. Kim, and T. Alber A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants Science 262 1993 1401 1407
4. N.E. Zhou, C.M. Kay, and R.S. Hodges The net energetic contribution of interhelical electrostatic attractions to coiled-coil stability Protein Eng. 7 1994 1365 1372
5. K. Suzuki, H. Hiroaki, D. Kohda, and T. Tanaka An isoleusine zipper peptide forms a native-like triple stranded coiled coil in solution Protein Eng. 11 1998 1051 1055
6. A.Y. Kornilova, J.F. Wishart, and M.Y. Ogawa Effect of surface charges on the rates of intermolecular electron-transfer between de novo designed metalloproteins Biochemistry 40 2001 12186 12192
7. M. Gochin, V. Khorosheva, and M.A. Case Structural characterization of a paramagnetic metal-ion-assembled three-stranded α-helical coiled coil J. Am. Chem. Soc. 124 2002 11018 11028
8. A. Fedorova, A. Chaudhari, and M.Y. Ogawa Photoinduced electron-transfer along α-helical and coiled-coil metallopeptides J. Am. Chem. Soc. 125 2003 357 362
9. A. Kashiwada, H. Hiroaki, D. Kohda, M. Nango, and T. Tanaka Design of a heterotrimeric α-helical bundle by hydrophobic core engineering J. Am. Chem. Soc. 122 2000 212 215
10. K. Suzuki, H. Hiroaki, D. Kohda, H. Nakamura, and T. Tanaka Metal ion induced self-assembly of a designed peptide into a triple-stranded α-helical bundle: a novel metal binding site in the hydrophobic core J. Am. Chem. Soc. 120 1998 13008 13015
11. X. Li, K. Suzuki, K. Kanaori, K. Tajima, A. Kashiwada, H. Hiroaki, D. Kohda, and T. Tanaka Soft metal ions, Cd(II) and folding of de novo designed peptide in their trigonal geometries Protein Sci. 9 2000 1327 1333
12. T. Kiyokawa, K. Kanaori, K. Tajima, and T. Tanaka Engineering of the hydrophobic core of an α-helical coiled coil Biopolymers 55 2000 407 414
13. M.R. Ghadiri, and C. Choi Secondary structure nucleation in peptides. Transition metal ion stabilized α-helices J. Am. Chem. Soc. 112 1990 1630 1632
14. F.H. Arnord, and B. Haymore Engineered metal-binding proteins: purification to protein folding Science 252 1991 1796 1797
15. Y. Nakamura, A. Kashiwada, and K. Matsuda Construction and characterization of metal ion sensitive coiled coil block Polym. Prep. Jpn. 53 2004 2015
16. J.L. Seifert, R.E. Connor, S.A. Kushon, M. Wang, and B.A. Armitag Spontaneous assembly of helical cyanine dye aggregates on DNA nanotemplates J. Am. Chem. Soc. 121 1999 2987 2995
17. D.M.L. Lilley, and T.J. Wilson Fluorescence resonance energy transfer as a structural tool for nucleic acids Curr. Opin. Chem. Biol. 4 2000 507 517
18. R. Corradini, A. Dossena, G. Galaverna, R. Marchelli, A. Panagia, and G. Sartor Fluorescent chemosensor for organic guests and copper(II) ion based on dansyldiethylenetriamine-modified β-Cyclodextrin J. Org. Chem. 62 1997 6283 6289
19. L. Fabbrizzi, M. Licchelli, A. Pallavicini, and L. Parodi Controllable intramolecular motions that generate fluorescent signals for a metal scorpionate complex Angew. Chem. Int. Ed. 37 1998 800 802
20. D.A. Pearce, G.K. Walkup, and B. Imperiali Peptidyl chemosensors incorporating a FRET mechanism for detection of Ni(II) Bioorg. Med. Chem. Lett. 8 1998 1963 1968
21. R.J. Sundberg, and R.B. Martin Interactions of histidine and other imidazole derivatives with transition metal ions in chemical and biological systems Chem. Rev. 74 1974 471 517
22. W.G. McGimpsey, L. Chen, R. Carraway, and W.N. Samaniego Singlet-singlet and triplet-triplet energy transfer in bichromophoric peptides J. Phys. Chem. A 103 1999 6082 6090
23. A. Kishimoto, T. Mutai, and K. Araki A distance-controlled oligopeptide linker as a novel photo-induced energy transfer switch by secondary structural transition Chem. Commun. 2003 742 743