-
1
-
-
0028918916
-
DNA-bend modulation in a repressor-to-activator switching mechanism
-
Ansari AZ, Bradner JE, O'Halloran TV. 1995. DNA-bend modulation in a repressor-to-activator switching mechanism. Nature 374:371-375.
-
(1995)
Nature
, vol.374
, pp. 371-375
-
-
Ansari, A.Z.1
Bradner, J.E.2
O'Halloran, T.V.3
-
2
-
-
0025980401
-
Spectroscopic characterization of the copper(I)-thiolate cluster in the DNA-binding domain of yeast ACE1 transcription factor
-
Casas-Finet JR, Hu S, Hamer D, Karpel R. 1991. Spectroscopic characterization of the copper(I)-thiolate cluster in the DNA-binding domain of yeast ACE1 transcription factor. FEBS Lett 281:205-208.
-
(1991)
FEBS Lett
, vol.281
, pp. 205-208
-
-
Casas-Finet, J.R.1
Hu, S.2
Hamer, D.3
Karpel, R.4
-
4
-
-
0032584776
-
The role of protonation and metal chelation preferences in defining the properties of mercury-binding coiled coils
-
Dieckmann GR, McRorie DK, Lear JD, Sharp KA, DeGrado WF, Pecoraro VL. 1998. The role of protonation and metal chelation preferences in defining the properties of mercury-binding coiled coils. J Mol Biol 280:897-912.
-
(1998)
J Mol Biol
, vol.280
, pp. 897-912
-
-
Dieckmann, G.R.1
McRorie, D.K.2
Lear, J.D.3
Sharp, K.A.4
DeGrado, W.F.5
Pecoraro, V.L.6
-
5
-
-
0030874443
-
De novo design of mercury-binding two-and three-helical bundles
-
Dieckmann GR, McRorie DK, Tierney D, Utschig LM, Singer CP, O'Halloran TV, Penner-Hahn JE, DeGrado WF, Pecoraro VL. 1997. De novo design of mercury-binding two-and three-helical bundles. J Am Chem Soc 119:6195-6196.
-
(1997)
J Am Chem Soc
, vol.119
, pp. 6195-6196
-
-
Dieckmann, G.R.1
McRorie, D.K.2
Tierney, D.3
Utschig, L.M.4
Singer, C.P.5
O'Halloran, T.V.6
Penner-Hahn, J.E.7
DeGrado, W.F.8
Pecoraro, V.L.9
-
6
-
-
0031260521
-
The solution structure of the amino-terminal HHCC domain of HIV-2 integrase: A three-helix bundle stabilized by zinc
-
Eijkelenboom APAM, van den Ent FMI, Vos A, Doreleijers JF, Hård K, Tullius TD, Plasterk RHA, Kaptein R, Boelens R. 1997. The solution structure of the amino-terminal HHCC domain of HIV-2 integrase: A three-helix bundle stabilized by zinc. Curr Biol 7:739-746.
-
(1997)
Curr Biol
, vol.7
, pp. 739-746
-
-
Eijkelenboom, A.P.A.M.1
Van Den Ent, F.M.I.2
Vos, A.3
Doreleijers, J.F.4
Hård, K.5
Tullius, T.D.6
Plasterk, R.H.A.7
Kaptein, R.8
Boelens, R.9
-
7
-
-
0030991020
-
Comparison of the structures of the metalthiolate binding site in Zn(II)-, Cd(II)-, and Hg(II)-metallothioneins using molecular modeling technique
-
Fowle DA, Stillman MJ. 1997. Comparison of the structures of the metalthiolate binding site in Zn(II)-, Cd(II)-, and Hg(II)-metallothioneins using molecular modeling technique. J Biomol Struct Dyn 14:393-405.
-
(1997)
J Biomol Struct Dyn
, vol.14
, pp. 393-405
-
-
Fowle, D.A.1
Stillman, M.J.2
-
8
-
-
0025292582
-
DNA distortion accompanies transcriptional activation by the metal-responsive gene-regulatory protein MerR
-
Frantz B, O'Halloran TV. 1990. DNA distortion accompanies transcriptional activation by the metal-responsive gene-regulatory protein MerR. Biochemistry 29:4747-4751.
-
(1990)
Biochemistry
, vol.29
, pp. 4747-4751
-
-
Frantz, B.1
O'Halloran, T.V.2
-
9
-
-
33748244071
-
De novo design of a novel heterodinuclear three-helix bundle metalloprotein
-
Ghadiri MR, Case MA. 1993. De novo design of a novel heterodinuclear three-helix bundle metalloprotein. Angew Chem Int Ed Engl 32:1594-1597.
-
(1993)
Angew Chem Int Ed Engl
, vol.32
, pp. 1594-1597
-
-
Ghadiri, M.R.1
Case, M.A.2
-
10
-
-
0001141181
-
A convergent approach to protein design. Metal ion-assisted spontaneous self-assembly of a polypeptide into a triple-helix bundle protein
-
Ghadiri MR, Soares C, Choi C. 1992a. A convergent approach to protein design. metal ion-assisted spontaneous self-assembly of a polypeptide into a triple-helix bundle protein. J Am Chem Soc 114:825-831.
-
(1992)
J Am Chem Soc
, vol.114
, pp. 825-831
-
-
Ghadiri, M.R.1
Soares, C.2
Choi, C.3
-
11
-
-
84989506919
-
Design of an artificial four-helix bundle metalloprotein via a novel ruthenium(II)-assisted self-assembly process
-
Ghadiri MR, Soares C, Choi C. 1992b. Design of an artificial four-helix bundle metalloprotein via a novel ruthenium(II)-assisted self-assembly process. J Am Chem Soc 114:4000-4002.
-
(1992)
J Am Chem Soc
, vol.114
, pp. 4000-4002
-
-
Ghadiri, M.R.1
Soares, C.2
Choi, C.3
-
12
-
-
0026410002
-
Structural aspects of metal liganding to functional groups in proteins
-
New York: Academic Press.
-
Glusker JP. 1991. Structural aspects of metal liganding to functional groups in proteins. Advances in protein chemistry. Vol 42. New York: Academic Press. pp 1-76.
-
(1991)
Advances in Protein Chemistry
, vol.42
, pp. 1-76
-
-
Glusker, J.P.1
-
13
-
-
0027146666
-
Controlled formation of model homo-and heterodimer coiled coil polypeptides
-
Graddis TJ, Myszka DG, Chaiken IM. 1993. Controlled formation of model homo-and heterodimer coiled coil polypeptides. Biochemistry 32:12664-12671.
-
(1993)
Biochemistry
, vol.32
, pp. 12664-12671
-
-
Graddis, T.J.1
Myszka, D.G.2
Chaiken, I.M.3
-
14
-
-
0024848116
-
1 complex. A possible new coordination mode for zinc-cysteine centers
-
1 complex. A possible new coordination mode for zinc-cysteine centers. J Am Chem Soc 111:8762-8763.
-
(1989)
J Am Chem Soc
, vol.111
, pp. 8762-8763
-
-
Gruff, E.S.1
Koch, S.A.2
-
15
-
-
0025215410
-
1 complexes of cadmium and mercury. Structural similarities between mercury-cysteine and cadmium-cysteine coordination centers
-
1 complexes of cadmium and mercury. Structural similarities between mercury-cysteine and cadmium-cysteine coordination centers. J Am Chem Soc 112:1245-1247.
-
(1990)
J Am Chem Soc
, vol.112
, pp. 1245-1247
-
-
Gruff, E.S.1
Koch, S.A.2
-
17
-
-
0027756896
-
A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants
-
Harbury PB, Zhang T, Kim PS, Alber T. 1993. A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants. Science 262:1401-1407.
-
(1993)
Science
, vol.262
, pp. 1401-1407
-
-
Harbury, P.B.1
Zhang, T.2
Kim, P.S.3
Alber, T.4
-
18
-
-
0030345054
-
De novo design of α-helical proteins: Basic research to medical applications
-
Hodges RS. 1996. De novo design of α-helical proteins: Basic research to medical applications. Biochem Cell Biol 74:133-154.
-
(1996)
Biochem Cell Biol
, vol.74
, pp. 133-154
-
-
Hodges, R.S.1
-
20
-
-
0023087396
-
Chemistry and biochemistry of metallothionein
-
Kägi JHR, Kojima Y. 1987. Chemistry and biochemistry of metallothionein. Experientia Suppl 52:25-61.
-
(1987)
Experientia Suppl
, vol.52
, pp. 25-61
-
-
Kägi, J.H.R.1
Kojima, Y.2
-
21
-
-
0023781524
-
Biochemistry of metallothionein
-
Kägi JHR, Schäffer A. 1988. Biochemistry of metallothionein. Biochemistry 27:8509-8515.
-
(1988)
Biochemistry
, vol.27
, pp. 8509-8515
-
-
Kägi, J.H.R.1
Schäffer, A.2
-
23
-
-
0029017933
-
Novel metal-binding proteins by design
-
Klemba M, Gardner KH, Marino S, Clarke ND, Regan L. 1995. Novel metal-binding proteins by design. Nat Struct Biol 2:368-373.
-
(1995)
Nat Struct Biol
, vol.2
, pp. 368-373
-
-
Klemba, M.1
Gardner, K.H.2
Marino, S.3
Clarke, N.D.4
Regan, L.5
-
24
-
-
0028959280
-
Protein destabilisation by electrostatic repulsions in the two-stranded α-helical coiled-coil/leucine zipper
-
Kohn WD, Kay CM, Hodges RS. 1995. Protein destabilisation by electrostatic repulsions in the two-stranded α-helical coiled-coil/leucine zipper. Protein Sci 4:237-250.
-
(1995)
Protein Sci
, vol.4
, pp. 237-250
-
-
Kohn, W.D.1
Kay, C.M.2
Hodges, R.S.3
-
25
-
-
0032542575
-
Metal ion introduced folding of a de novo designed coiled-coil peptide
-
Kohn WD, Kay CM, Sykes BD, Hodges RS. 1998. Metal ion introduced folding of a de novo designed coiled-coil peptide. J Am Chem Soc 120:1124-1132.
-
(1998)
J Am Chem Soc
, vol.120
, pp. 1124-1132
-
-
Kohn, W.D.1
Kay, C.M.2
Sykes, B.D.3
Hodges, R.S.4
-
26
-
-
0021719074
-
Synthesis of a model protein of defined secondary and quaternary structure: Effect of chain length on the stabilization and formation of two-stranded α-helical coiled-coils
-
Lau SYM, Taneja AK, Hodges RS. 1984. Synthesis of a model protein of defined secondary and quaternary structure: Effect of chain length on the stabilization and formation of two-stranded α-helical coiled-coils. J Biol Chem 259:13253-13261.
-
(1984)
J Biol Chem
, vol.259
, pp. 13253-13261
-
-
Lau, S.Y.M.1
Taneja, A.K.2
Hodges, R.S.3
-
27
-
-
85007885646
-
Iron (II) organizes a synthetic peptide into three-helix bundles
-
Lieberman M, Sasaki T. 1991. Iron (II) organizes a synthetic peptide into three-helix bundles. J Am Chem Soc 113:1470-1471.
-
(1991)
J Am Chem Soc
, vol.113
, pp. 1470-1471
-
-
Lieberman, M.1
Sasaki, T.2
-
28
-
-
0030804094
-
Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil
-
Moitra J, Szilák L, Krylov D, Vinson C. 1997. Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil. Biochemistry 36:12567-12573.
-
(1997)
Biochemistry
, vol.36
, pp. 12567-12573
-
-
Moitra, J.1
Szilák, L.2
Krylov, D.3
Vinson, C.4
-
29
-
-
0028330850
-
Electrostatic interactions control the parallel and antiparallel orientation of α-helical chains in two-stranded α-helical coiled-coils
-
Monera OD, Kay CM, Hodges RS. 1994. Electrostatic interactions control the parallel and antiparallel orientation of α-helical chains in two-stranded α-helical coiled-coils. Biochemistry 33:3862-3871.
-
(1994)
Biochemistry
, vol.33
, pp. 3862-3871
-
-
Monera, O.D.1
Kay, C.M.2
Hodges, R.S.3
-
30
-
-
0021829810
-
Distinct metal-binding configurations in metallothionein
-
Nielson KB, Atkin CL., Winge DR. 1985. Distinct metal-binding configurations in metallothionein. J Biol Chem 260:5342-5350.
-
(1985)
J Biol Chem
, vol.260
, pp. 5342-5350
-
-
Nielson, K.B.1
Atkin, C.L.2
Winge, D.R.3
-
31
-
-
0025222978
-
A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids
-
O'Neil KT, DeGrado WF. 1990. A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids. Science 250:646-651.
-
(1990)
Science
, vol.250
, pp. 646-651
-
-
O'Neil, K.T.1
DeGrado, W.F.2
-
32
-
-
0026528230
-
v fragments with high avidity in Escherichia coli
-
v fragments with high avidity in Escherichia coli. Biochemistry 31:1579-1584.
-
(1992)
Biochemistry
, vol.31
, pp. 1579-1584
-
-
Pack, P.1
Plückthun, A.2
-
33
-
-
0025764258
-
Straight-chain non-polar amino acids are good helix-formers in water
-
Padmanabhan S, Baldwin RL. 1991. Straight-chain non-polar amino acids are good helix-formers in water. J Mol Biol 219:135-137.
-
(1991)
J Mol Biol
, vol.219
, pp. 135-137
-
-
Padmanabhan, S.1
Baldwin, R.L.2
-
34
-
-
0027471542
-
A designed metal-binding protein with a novel fold
-
Pessi A, Bianchi E, Crameri A, Venturini S, Tramontano A, Sollazzo M. 1993. A designed metal-binding protein with a novel fold. Nature 362:367-369.
-
(1993)
Nature
, vol.362
, pp. 367-369
-
-
Pessi, A.1
Bianchi, E.2
Crameri, A.3
Venturini, S.4
Tramontano, A.5
Sollazzo, M.6
-
35
-
-
0025371253
-
Ultrasensitivity and heavy-metal selectivity of the allosterically modulated MerR transcription complex
-
Ralston DM, O'Halloran TV. 1990. Ultrasensitivity and heavy-metal selectivity of the allosterically modulated MerR transcription complex. Proc Natl Acad Sci USA 87:3846-3850.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 3846-3850
-
-
Ralston, D.M.1
O'Halloran, T.V.2
-
36
-
-
0029016430
-
Protein design: Novel metal-binding sites
-
Regan L. 1995. Protein design: Novel metal-binding sites. Trends Biochem Sci 20:280-285.
-
(1995)
Trends Biochem Sci
, vol.20
, pp. 280-285
-
-
Regan, L.1
-
37
-
-
0025644594
-
A tetrahedral zinc(II)-binding site introduced into a designed protein
-
Regan L, Clarke ND. 1990. A tetrahedral zinc(II)-binding site introduced into a designed protein. Biochemistry 29:10878-10883.
-
(1990)
Biochemistry
, vol.29
, pp. 10878-10883
-
-
Regan, L.1
Clarke, N.D.2
-
38
-
-
0026047966
-
Refined crystal structure of Cd, Zn metallothionein at 2.0 Å resolution
-
Robbins AH, McRee DE, Williamson M, Collett SA, Xuong NH, Furey WF, Wang BC, Stout CD. 1991. Refined crystal structure of Cd, Zn metallothionein at 2.0 Å resolution. J Mol Biol 221:1269-1293.
-
(1991)
J Mol Biol
, vol.221
, pp. 1269-1293
-
-
Robbins, A.H.1
McRee, D.E.2
Williamson, M.3
Collett, S.A.4
Xuong, N.H.5
Furey, W.F.6
Wang, B.C.7
Stout, C.D.8
-
39
-
-
0002895832
-
113Cd NMR spectroscopy of coordination compounds and proteins
-
113Cd NMR spectroscopy of coordination compounds and proteins. Coord Chem Rev 86:43-134.
-
(1988)
Coord Chem Rev
, vol.86
, pp. 43-134
-
-
Summers, M.F.1
-
40
-
-
0032561793
-
Metal ion induced self-assembly of a designed peptide into a triple stranded α-helical bundle: A novel metal binding site in the hydrophobic core
-
Suzuki K, Hiroaki H, Kohda D, Nakamura H, Tanaka T. 1998a. Metal ion induced self-assembly of a designed peptide into a triple stranded α-helical bundle: A novel metal binding site in the hydrophobic core. J Am Chem Soc 120:13008-13015.
-
(1998)
J Am Chem Soc
, vol.120
, pp. 13008-13015
-
-
Suzuki, K.1
Hiroaki, H.2
Kohda, D.3
Nakamura, H.4
Tanaka, T.5
-
41
-
-
0031793228
-
An isoleucine zipper peptide forms a native-like triple stranded coiled coil in solution
-
Suzuki K, Hiroaki H, Khoda D, Tanaka T. 1998b. An isoleucine zipper peptide forms a native-like triple stranded coiled coil in solution. Protein Eng 11:1051-1055.
-
(1998)
Protein Eng
, vol.11
, pp. 1051-1055
-
-
Suzuki, K.1
Hiroaki, H.2
Khoda, D.3
Tanaka, T.4
-
42
-
-
0033044710
-
The role of the buried glutamate in the α helical coiled coil domain of the macrophage scavenger receptor
-
Suzuki K, Yamada T, Tanaka T, 1999. The role of the buried glutamate in the α helical coiled coil domain of the macrophage scavenger receptor. Biochemistry 38:1751-1756.
-
(1999)
Biochemistry
, vol.38
, pp. 1751-1756
-
-
Suzuki, K.1
Yamada, T.2
Tanaka, T.3
-
43
-
-
0031049701
-
"Peptabody": A new type of high avidity binding protein
-
Terskikh AV, Doussal JL, Crameri R, Fisch I, Mach J, Kajava AV. 1997. "Peptabody": A new type of high avidity binding protein. Proc Natl Acad Sci USA 94:1663-1668.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 1663-1668
-
-
Terskikh, A.V.1
Doussal, J.L.2
Crameri, R.3
Fisch, I.4
Mach, J.5
Kajava, A.V.6
-
44
-
-
0029061164
-
Mercury-199 NMR of the metal receptor site in MerR and its protein-DNA complex
-
Utschig LM, Bryson JW, O'Halloran TV. 1995. Mercury-199 NMR of the metal receptor site in MerR and its protein-DNA complex. Science 268:380-385.
-
(1995)
Science
, vol.268
, pp. 380-385
-
-
Utschig, L.M.1
Bryson, J.W.2
O'Halloran, T.V.3
-
45
-
-
0025345361
-
Trigonal mercuric complex of an aliphatic thiolate: A spectroscopic and structural model for the receptor site in the Hg(II) biosensor MerR
-
Watton SP, Wright JG, MacDonnell FM, Bryson JW, Sabat M, O'Halloran TV. 1990. Trigonal mercuric complex of an aliphatic thiolate: A spectroscopic and structural model for the receptor site in the Hg(II) biosensor MerR. J Am Chem Soc 112:2824-2826.
-
(1990)
J Am Chem Soc
, vol.112
, pp. 2824-2826
-
-
Watton, S.P.1
Wright, J.G.2
MacDonnell, F.M.3
Bryson, J.W.4
Sabat, M.5
O'Halloran, T.V.6
-
46
-
-
0032581662
-
Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex
-
White A, Ding X, van der Spek JC, Murphy JR, Ringe D. 1998. Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex. Nature 394:502-506.
-
(1998)
Nature
, vol.394
, pp. 502-506
-
-
White, A.1
Ding, X.2
Van Der Spek, J.C.3
Murphy, J.R.4
Ringe, D.5
-
47
-
-
0000615316
-
Mercury (II)-thiolate chemistry and the mechanism of the heavy metal biosensor MerR
-
Lippard SJ, ed. New York: John Wiley & Sons, Inc.
-
Wright JG, Natan MJ, MacDonnell FM, Ralston DM, O'Halloran TV. 1990a. Mercury (II)-thiolate chemistry and the mechanism of the heavy metal biosensor MerR. In: Lippard SJ, ed. Progress in inorganic chemistry, vol. 38, New York: John Wiley & Sons, Inc. pp 323-412.
-
(1990)
Progress in Inorganic Chemistry
, vol.38
, pp. 323-412
-
-
Wright, J.G.1
Natan, M.J.2
MacDonnell, F.M.3
Ralston, D.M.4
O'Halloran, T.V.5
-
48
-
-
0025218408
-
Coordination chemistry of the Hg-MerR metalloregulatory protein: Evidence for a novel tridentate Hg-cysteine receptor site
-
Wright JG, Tsang H-T, Penner-Hahn JE, O'Halloran TV. 1990b. Coordination chemistry of the Hg-MerR metalloregulatory protein: Evidence for a novel tridentate Hg-cysteine receptor site. J Am Chem Soc 112:2434-2435.
-
(1990)
J Am Chem Soc
, vol.112
, pp. 2434-2435
-
-
Wright, J.G.1
Tsang, H.-T.2
Penner-Hahn, J.E.3
O'Halloran, T.V.4
-
49
-
-
0032506227
-
The core metal-recognition domain of MerR
-
Zeng O, Stalhandske C, Anderson MC, Scott RA, Summers AO. 1998. The core metal-recognition domain of MerR. Biochemistry 37:15885-15895.
-
(1998)
Biochemistry
, vol.37
, pp. 15885-15895
-
-
Zeng, O.1
Stalhandske, C.2
Anderson, M.C.3
Scott, R.A.4
Summers, A.O.5
-
50
-
-
0027949381
-
The net energetic contribution of interhelical electrostatic attractions to coiled-coil stability
-
Zhou NE, Kay CM, Hodges RS, 1994. The net energetic contribution of interhelical electrostatic attractions to coiled-coil stability. Protein Eng 7:1365-1372.
-
(1994)
Protein Eng
, vol.7
, pp. 1365-1372
-
-
Zhou, N.E.1
Kay, C.M.2
Hodges, R.S.3
|