Reconstruction and exploration of three-dimensional confocal microscopy data in an immersive virtual environment

Computerized Medical Imaging and Graphics

Volumn 29, Issue 5, 2005, Pages 313-318

  Ai, Zhuming ^a   Chen, Xue ^a   Rasmussen, Mary ^a   Folberg, Robert ^a  

^a UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

Author keywords

Alignment; Confocal microscopy; Three dimensional reconstruction; Virtual reality; Visualization

Indexed keywords

DATA REDUCTION; VOLUMETRIC ANALYSIS;

AUTOMATIC ALIGNMENT; CONFOCAL MICROSCOPY; GEOMETRIC DISTORTIONS;

VIRTUAL REALITY;

ARTICLE; AUTOANALYSIS; CONFOCAL MICROSCOPY; ELECTRONICS; GEOMETRY; IMAGE DISPLAY; IMAGING SYSTEM; MEDICAL INSTRUMENTATION; MICROSCOPE IMAGE; PRIORITY JOURNAL; THREE DIMENSIONAL IMAGING; VIRTUAL REALITY;

HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; IMAGING, THREE-DIMENSIONAL; MICROSCOPY, CONFOCAL; USER-COMPUTER INTERFACE;

EID: 19744373332     PISSN: 08956111     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.compmedimag.2005.01.003     Document Type: Article

References (20)

1. R. van Liere, W. de Leeuw, J. Mulder, P. Verschure, A. Visser, and E. Manders Virtual reality in biological microscopic imaging In: IEEE international symposium on biomedical imaging 2002
2. C. Monks, P. Crossno, G. Davidson, C. Pavlakos, A. Kupfer, and C. Silva Three dimensional visualization of proteins in cellular interactions In: IEEE visualization 1996 363 366
3. J.B. Pawley Handbook of biological confocal microscopy 1995 Plenum Press New York
4. E. Brey, T. King, C. Johnston, L. McIntire, G. Reece, and C. Patrick Jr A technique for quantitative three-dimensional analysis of microvascular structure Microvasc Res 63 2002 279 294
5. X. Chen, Z. Ai, M. Rasmussen, P. Bajcsy, L. Auvil, and M. Welge Three-dimensional reconstruction of extravascular matrix patterns and blood vessels in human uveal melanoma tissue: preliminary findings Invest Ophthalmol Vis Sci 44 7 2003 2834 2840
6. C. Cruz-Neira, D.J. Sandin, and T.A. DeFanti Surround-screen projection-based virtual reality: the design and implementation of the CAVE Proceedings of Siggraph 93 1993 ACM Press New York pp. 135-142
7. M. Czernuszenko, D. Pape, D. Sandin, T. DeFanti, G. Dawe, and M. Brown The ImmersaDesk and infinity wall projection-based virtual reality displays Comput Graph 31 2 1997 46
8. T.L. Clifton, and F.L. Wefer Direct volume display devices IEEE Comput Graph Appl 13 4 1993 57 65
9. W.J. Dallas Computer generated holograms The computer in optical research, topics in applied physics vol. 41 1980 Springer New York p. 291
10. J. Leigh, A. Johnson, T. DeFanti, M. Brown, M. Ali, and S. Bailey A review of tele-immersive applications in the cave research network Proceedings of the IEEE virtual reality 2000 international conference (VR 2000) 1999
11. Z. Ai, F. Dech, J. Silverstein, and M. Rasmussen Tele-immersive medical educational environment Stud Health Technol Inform 85 2002 24 30
12. Z. Ai, F. Dech, M. Rasmussen, and J.C. Silverstein Radiological tele-immersion for next generation networks Stud Health Technol Inform 70 2000 4 9
13. W. Schroeder, K. Martin, and B. Lorensen The visualization toolkit: an object-oriented approach to 3D graphics 1996 Prentice Hall PTR Englewood Cliffs
14. http://www.imagemagick.org.
15. http://www.gtkmm.org.
16. K. Park, Y. Cho, N. Krishnaprasad, C. Scharver, M. Lewis, and J. Leigh Cavernsoft g2: a toolkit for high performance tele-immersive collaboration Proceedings of the ACM symposium on virtual reality software and technology 2000, Seoul, Korea 2000 p. 8-15
17. IRIS performer programmer's guide.
18. OpenGL volumizer programmer's guide.
19. J.C. Russ The image processing handbook 3rd ed. 1999 CRC Press, IEEE Press Boca Raton (Chapter 10)
20. R. Woods, S. Grafton, C. Holmes, S. Cherry, and J. Mazziotta Automated image registration: I. General methods and intrasubject, intramodality validation J Comput Assisted Tomogr 22 1998 141 154