Isolation of tannin-degrading bacteria isolated from feces of the Japanese large wood mouse, Apodemus speciosus, feeding on tannin-rich acorns

Systematic and Applied Microbiology

Volumn 28, Issue 4, 2005, Pages 358-365

  Sasaki, Eiki ^a   Shimada, Takuya ^b   Osawa, Ro ^a   Nishitani, Yosuke ^a   Spring, Stefan ^c   Lang, Elke ^c  

^a KOBE UNIVERSITY   (Japan)

^b FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

^c LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

Lactobacillus animalis; Lactobacillus murinus; Novel tannase producing lactobacilli; Streptococcus gallolyticus

Indexed keywords

BACTERIAL DNA; CYTOSINE; GUANINE; HYDROLASE; RIBOSOME DNA; TANNASE; TANNIN; UNCLASSIFIED DRUG;

APODEMUS SPECIOSUS; ARTICLE; BACTERIUM; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CHEMICAL ANALYSIS; CLASSIFICATION; CONTROLLED STUDY; DEGRADATION; DNA DETERMINATION; DNA HYBRIDIZATION; DNA SEQUENCE; ENZYME ACTIVITY; FECES; FEEDING; GENE AMPLIFICATION; GENETIC ANALYSIS; GENOTYPE; GENUS; GRAM POSITIVE BACTERIUM; GRAM POSITIVE COCCI; LACTOBACILLUS; LACTOBACILLUS ANIMALIS; LACTOBACILLUS MURINUS; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; NUT; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION MAPPING; RODENT; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SPECIES; STREPTOCOCCUS; STREPTOCOCCUS GALLOLYTICUS; TAXON;

APODEMUS SPECIOSUS; BACILLI; LACTOBACILLUS ANIMALIS; LACTOBACILLUS MURINUS; POSIBACTERIA; RODENTIA; STREPTOCOCCUS GALLOLYTICUS;

EID: 19444362027     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.syapm.2005.01.005     Document Type: Article

References (33)

1. K. Aoki, R. Shinke, and H. Nishira Purification and some properties of yeast tannase Agric. Biol. Chem. 40 1976 79 85
2. A.L. Chung-MacCoubrey, A.E. Hagerman, and R.L. Kirkpatrick Effect of tannins on digestion and detoxification activity in gray squirrels (Sciurus carolinesis) Physiol. Zool. 70 1997 270 277
3. L.R. Dice Measures of the amount of ecologic association between species Ecology 26 1945 297 302
4. S. Dubernet, N. Desmasures, and M. Gueguen A PCR-based method for identification of lactobacilli at the genus level FEMS Microbiol. Lett. 214 2002 271 275
5. I.H. Eberhard Ecology of the koala, Phascolarctos cinereus (Goldfuss) Marsupialia: Phascolarctidae, in Australia G.G. Montogomery The Ecology of Arboreal Folivore 1978 Smithsonian Institution Press Washington, DC 315 327
6. J. Felsenstein Numerical methods for inferring phylogenetic trees Q. Rev. Biol. 57 1982 379 404
7. A.E. Hagerman, and K.M. Klucher Tannin-protein interactions J. Harborne E. Middleton Flavonoids in Biology and Medicine: Biochemical, Pharmacoloica, and Structure-Activity Relationships 1986 Liss, Inc. New York 67 76
8. A. Ibrahim, P. Gerner-Smidt, and A. Sjostedt Amplification and restriction endonuclease digestion of a large fragment of genes coding for rRNA as a rapid method for discrimination of closely related pathogenic bacteria J. Clin. Microbiol. 34 1996 2894 2896
9. Y. Kanazawa, and S. Nishikata Disappearance of acorns from the floor in Quercus crispula forests J. Jpn. For. Soc. 58 1976 52 56
10. O. Kandler, and N. Weiss Genus Lactoacillus Beijerinck 1901, 212 AL P.H.A. Sneath N.S. Mair M.E. Sharpe J.G. Holt Bergey's Manual of Systematic Bacteriology vol. 2 1986 Williams & Wilkins Baltimore, MD 1209 1234
11. Y. Katayama-Fujimura, Y. Komatsu, H. Kuraishi, and T. Kaneko Estimation of DNA base composition by high performance liquid chromatography of its nuclease P1 hydrolysate Agric. Biol. Chem. 40 1984 3169 3172
12. W. Ludwig, O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lal, S. Steppi, G. Jobb, W. Forster, I. Brettske, S. Gerber, A.W. Ginhart, O. Gross, S. Grumann, S. Hermann, R. Jost, A. Konig, T. Liss, R. Lussmann, M. May, B. Nonhoff, B. Reichel, R. Strehlow, A. Stamatakis, N. Stuckmann, A. Vilbig, M. Lenke, T. Ludwig, A. Bode, and K.H. Schleifer ARB: a software environment for sequence data Nucleic Acids Res. 32 2004 1363 1371
13. L.J. Marmur A procedure for the isolation of deoxyribonucleic acid from microorganisms J. Mol. Biol. 3 1961 208 218
14. H. Mehansho, L.G. Butler, and D.M. Carson Dietary tannins and salivary proline-rich proteins: interactions, induction, and defense mechanisms Annu. Rev. Nutr. 7 1987 423 440
15. K. Nemoto, R. Osawa, K. Hirota, T. Ono, and Y. Miyake An investigation of Gram negative tannin-protein complex degrading bacteria in fecal flora of various mammals J. Vet. Med. Sci. 57 1995 921 926
16. S. Nishikata Habitat preference of Apodemus speciosus and A. argenteus J. Jpn. For. Soc. 63 1981 151 155
17. Y. Nishitani, E. Sasaki, T. Fujisawa, and R. Osawa Genotypic analyses of lactobacilli with a range of tannase activities isolated from human feces and fermented foods Syst. Appl. Microbiol. 27 2004 109 117
18. R. Osawa Formation of a clear zone on tannin-treated brain-heart infusion agar by a Streptococcus sp. isolated from feces of koalas Appl. Environ. Microbiol. 56 1990 829 831
19. R. Osawa, W.H. Blanshard, and P.G. O'Callaghan Microbiological studies of the intestinal microflora of the koala, Phascolarctos cinereus. II. Pap, a special maternal faeces consumed by juvenile koalas Aust. J. Zool. 41 1993 611 620
20. R. Osawa, T. Fujisawa, and L.I. Sly Streptococcus gallolyticus sp. nov.; gallate degrading organisms formerly assigned to Streptococcus bovis Syst. Appl. Microbiol. 18 1995 74 78
21. R. Osawa, F. Rainey, T. Fujisawa, E. Lang, H.J. Busse, T.P. Walsh, and E. Stackebrandt Lonepinella koalarum gen. nov., sp. Nov., a new tannin-protein complex degrading bacterium Syst. Appl. Microbiol. 18 1995 368 373
22. R. Osawa, and L.I. Sly Occurrence of tannin protein complex degrading Streptococcus sp. in various animals Syst. Appl. Microbiol. 15 1992 144 147
23. R. Osawa, and T.P. Walsh Visual reading method for detection of bacterial tannase Appl. Environ. Microbiol. 59 1993 1251 1252
24. R. Osawa, and T.P. Walsh Detection of bacterial gallate decarboxylation by visual color discrimination J. Gen. Appl. Microbiol. 41 1995 165 170
25. F.A. Rainey, N. Ward-Rainey, R.M. Kroppenstedt, and E. Stackebrandt The genus Nocardiopsis represents a phylogenetically coherent taxon and distinct actinomycete lineage: proposal for Nocardiopsaceae fam. nov. Int. J. Syst. Bacteriol. 46 1996 1088 1092
26. D.K. Salunkhe, J.K. Chavan, and S.S. Kadam Dietary Tannins: Consequences and Remedies 1989 CRC Press Boca Raton, FL
27. E. Sasaki, R. Osawa, Y. Nishitani, and R.A. Whiley Development of a diagnostic PCR assay targeting the Mn-dependent superoxide dismutase gene (sodA) for identification of Streptococcus gallolyticus J. Clin. Microbiol. 42 2004 1360 1362
28. T. Shimada Nutrient compositions of acorns and horse chestnuts in relation to seed-hording Ecol. Res. 16 2001 803 808
29. T. Shimada, and T. Saitoh Negative effects of acorns on the wood mouse Apodemus speciousus Popul. Ecol. 45 2003 7 17
30. K. Sone, T. Sekijima, and H. Okumura Stomach contents of the wood mouse, Apodemus speciousus Temminck Trans. Jpn. For. Sco. 97 1986 467 468
31. K. Tatsukawa, and O. Murakami On the food utilization of the Japanese wood mouse Apodemus speciousus (Mammalia: Muridae) (in Japanese with English summary) Physiol. Ecol. Japan 17 1976 133 144
32. N. Wada Dwarf bamboos affect the regeneration of zoochorous trees by providing habitats to acorn-feeding rodents Oecologia (Berl) 94 1993 403 407
33. T. Yaeshima, S. Takahashi, N. Ishibashi, and S. Shimamura Identification of bifidobacteria from dairy products and evaluation of a microplate hybridization method Int. J. Food Microbiol. 30 1996 303 313