Metabolomic differential display analysis of the white-rot basidiomycete Phanerochaete chrysosporium grown under air and 100% oxygen

FEMS Microbiology Letters

Volumn 234, Issue 1, 2004, Pages 111-116

  Miura, Daisuke ^a   Tanaka, Hiroo ^a   Wariishi, Hiroyuki ^a  

^a KYUSHU UNIVERSITY   (Japan)

Author keywords

Basidiomycete; Metabolomic differential display analysis; Oxygen stress; Stress responsive compounds

Indexed keywords

ALANINE; AROMATIC COMPOUND; BENZOIC ACID; CARBOXYLIC ACID; CITRIC ACID; ERYTHRONIC ACID; FUMARIC ACID; GLUCAN; GLYCINE; ISOLEUCINE; LACTIC ACID; MALIC ACID; MALONIC ACID; METHANOL; METHIONINE; OXYGEN; PYRUVIC ACID; SATURATED FATTY ACID; SERINE; STEROL; SUGAR; THREONIC ACID; THREONINE; UNCLASSIFIED DRUG; UNSATURATED FATTY ACID; VALINE; VERATRYL ALCOHOL;

AIR; ARTICLE; ATMOSPHERE; BASIDIOMYCETES; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DIFFERENTIAL DISPLAY; EXTRACELLULAR SPACE; EXTRACTION; FREEZE DRYING; FUNGAL CELL; FUNGAL CELL CULTURE; GAS CHROMATOGRAPHY; ION PAIR CHROMATOGRAPHY; ISOLATION PROCEDURE; MASS SPECTROMETRY; METABOLITE; MYCELIAL GROWTH; NONHUMAN; PHANEROCHAETE; PRIORITY JOURNAL; STRESS; WEIGHT;

AIR; BENZYL ALCOHOLS; BIOMASS; BUTYRIC ACIDS; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; GLUCANS; MYCELIUM; OXIDATIVE STRESS; OXYGEN; PHANEROCHAETE;

CHRYSOSPORIUM; PHANEROCHAETE; PHANEROCHAETE CHRYSOSPORIUM;

EID: 1942502303     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2004.03.017     Document Type: Article

References (26)

1. Vitor C., Pedro M.F. Oxidative stress and signal transduction in Saccharomyces cerevisiae: insight into ageing, apoptosis and diseases. Mol. Aspects Med. 22:2000;217-246.
2. José M.M., Francisca M.S. Role of reactive oxygen species in apoptosis: implications for canter therapy. Int. J. Biochem. Cell Biol. 32:2000;157-170.
3. Derek J.J. Oxidative stress responses of the yeast Saccharomyces cerevisiae. Yeast. 14:1998;1511-1527.
4. Sarkanen K.V., Ludwig C.H. Lignins: Occurrence, Formation, Structure and Reactions. 1971;Wiley, New York.
5. Crawford R.L. Lignin Biodegradation and Transformation. 1981;Wiley, New York.
6. Gold, M.H., Wariishi, H., Valli, K. (1989). In: Biocatalysis in Agricultural Biotechnology, ACS Symposium Series (Whi-taker, J.R. and Sonnet, P., Eds.), vol. 389, pp. 127-140. Am. Chem. Soc., Washington, DC.
7. Kirk T.K., Farrell R.L. Enzymatic "combustion": the microbial degradation of lignin. Annu. Rev. Microbiol. 41:1987;465-505.
8. Bumpus J.A., Tien M., Wright D., Aust S.D. Oxidation of persistent environmental pollutants by a white rot fungus. Science. 228:1985;1434-1436.
9. Hiratsuka N., Wariishi H., Tanaka H. Degradation of diphenyl ether herbicides by the lignin-degrading basidiomycete Coriolus versicolor. Appl. Microbiol. Biotechnol. 57:2001;563-571.
10. Kirk T.K., Schultz E., Connors W.J., Lorentz L.F., Zeikus J.G. Influence of culture parameters on lignin metabolism by Phanerochaete chrysosporium. Arch. Microbiol. 117:1978;277-285.
11. Faison B.D., Kirk T.K. Factors involved in the regulation of a ligninase activity in Phanerochaete chrysosporium. Appl. Environ. Microbiol. 49:1985;299-304.
12. Delneri D., Brancia F.L., Oliver S.G. Towards a truly integrative biology through the functional genomics of yeast. Curr. Opin. Biotechnol. 12:2001;87-91.
13. Fiehn O., Kopka J., Dormann P., Altmann T., Trethewey R.N., Willimitzer L. Metabolite profiling for plant functional genomics. Nat. Biotechnol. 18:2000;1157-1161.
14. Leisola M.S.A., Ulmer D.C., Fiechter A. Problem of oxygen transfer during lignin degradation by Phanerochaete chrysosporium. Eur. J. Appl. Microbiol. Biotechnol. 17:1983;113-116.
15. Forney L.J., Reddy C.A., Tien M., Aust S.D. The involvement of hydroxyl radical derived from hydrogen peroxide in lignin degradation by the white rot fungus Phanerochaete chrysosporium. J. Biol. Chem. 257:1982;11455-11462.
16. Leisola M.S.A., Ulmer D., Fiechter A. Factors affecting lignin degradation in lignocellulose by Phanerochaete chrysosporium. Arch. Microbiol. 137:1984;171-175.
17. Buchala A.J., Leisola M.S.A. Structure of the β-D-glucan secreted by Phanerochaete chrysosporium. Carbohydrate Res. 165:1987;146-149.
18. Dosoretz C.G., Chen A.H.-C., Grethlein H.E. Effect of oxygenation conditions on submerged cultures of Phanerochaete chrysosporium. Appl. Microbiol. Biotechnol. 34:1990;131-137.
19. Zacchi L., Morris I., Harvey P.J. Disordered ultrastructure in lignin-peroxidase-secreting hyphae of the white-rot fungus Phanerochaete chrysosporium. Microbiology. 146:2000;759-765.
20. Lundquist K., Kirk T.K. De novo synthesis and decomposition of veratryl alcohol by a lignin degrading basidiomycete. Phytochemistry. 17:1978;1676.
21. Deutsch J.C. Oxygen-accepting antioxidants which arise during ascorbate oxidation. Anal. Biochem. 265:1998;238-245.
22. Helsper J.P., Loewus F.A. Metabolism of L-threonic acid in Rumex. × acutus L., Pelargonium crispum (L.) L'Hér Plant Physiol. 69:1982;1365-1368.
23. White G.A., Krupka R.M. Ascorbic acid oxidase and ascorbic acid oxygenase of Myrothecium verrucaria. Arch. Biochem. Biophys. 110:1965;448-461.
24. Loewus F.A. Biosynthesis and metabolism of ascorbic acid in plants and of analogs of ascorbic acid in fungi. Phytochemistry. 52:1999;193-210.
25. Wariishi H., Gold M.H. Lignin peroxidase compound III; mechanism of formation and decomposition. J. Biol. Chem. 265:1990;2070-2077.
26. Harvey P.J., Schoemaker H.E., Palmer J.M. Veratryl alcohol as a mediator and the role of radical cations in lignin biodegradation by Phanerochaete chrysosporium. FEBS Lett. 195:1986;242-246.