Application of rice (Oryza sativa L.) suspension culture in studying senescence in vitro (I). Single strand preferring nuclease activity

Electronic Journal of Biotechnology

Volumn 5, Issue 1, 2002, Pages 42-54

  Hosseini, Ramin ^a,b   Mulligan, Bernard J ^a,c  

^a UNIVERSITY OF NOTTINGHAM   (United Kingdom)

^b SHAHID BEHESHTI UNIVERSITY   (Iran)

^c EUROPEAN COMMISSION   (Belgium)

Author keywords

Programmed Cell Death (PCD); Rice; Senescence

Indexed keywords

EID: 18944377325     PISSN: 07173458     EISSN: 07173458     Source Type: Journal    
DOI: 10.2225/vol5-issue1-fulltext-8     Document Type: Article

References (63)

1. ABDULLAH, R.; COCKING, E.C. and THOMPSON, J.A. Efficient plant regeneration from rice protoplasts through somatic embryogenesis. Biotechnology, 1986, no. 4, p. 1087-1090.
2. ABEL, S. and GLUND, K. Localization of RNA-degrading enzyme activity within vacuoles of cultured tomato cells. Physiologia Plantarum, 1986, no. 66, p. 79-86.
3. BARIOLA, P.A.; HOWARD, C.J.; TAYLOR, C.B.; VERBURG, M.T.; JAGLAN, V.D. and GREEN, P.J. The Arabidopsis ribonuclease gene RNS1 is tightly controlled in response to phosphate limitation. The Plant Journal, 1994, no. 6, p. 673-685.
4. BLANK, A. and MCKEON, T.A. Single-strand-preferring nuclease activity in wheat leaves is increased in senescence and is negatively photoregulated. Proceedings of the National Academy of Sciences United States of America, 1989, no. 86, p. 3169-3173.
5. BLANK, A. and MCKEON, T. Three RNases in senescent and nonsenescent wheat leaves. Plant Physiology, 1991a, no. 97, p. 1402-1408.
6. BLANK, A. and MCKEON, T. Expression of three RNases activities during natural and dark-induced senescence of wheat leaves. Plant Physilogy, 1991b, no. 97, p. 1409-1413.
7. BLANK, A.; SILBER, J.R.; THELEN, M.P. and DEKKER, C.A. Detection of enzymatic activities in sodium dodecyl sulphate-polyacrylamide gels: DNA polymerases as model enzymes. Analytical Biochemistry, 1983, no. 135, p. 423-430.
8. BORRELL, A.K.; HAMMER, G.L. and VAN OOSTEROM, E. Stay green: a consequence of the balance between supply and demand for nitrogen during grain filling. Annals of Applied Biology, 2001, no. 38, p. 91-95.
9. BORRELL, A.K.; HAMMER, G.L. and DOUGLAS, A.C.L. Does maintaining green leaf area in sorghum improve yield under drought?. I. Leaf growth and senescence. Crop Science, 2000, no. 40, p. 1926-1937.
10. BORTNER, C.D.; OLDENBURG, N.B.E. and CIDLOWSKI, J.A. The role of DNA fragmentation in apoptosis. Trends in Cell Biology, 1995, no. 5, p. 21-26.
11. BROWN, P. and HO, T.D. Barley aleurone layers secrete nuclease in response to gibberellic acid. Plant Physiology, 1986, no. 82, p. 801-806.
12. CALLARD, D.; AXELOS, M. and MAZZOLINI, L. Novel molecular markers for late phase of the growth cycle of Arabidopsis thaliana cell-suspension cultures are expressed during organ senescence. Plant Physiology, 1996, no 112, p. 705-715.
13. CAMP, P.J.; HUBER, S.C. and MORELAND, D.E. Changes in enzymes of sucrose metabolism and the activation of certain chloroplast enzymes during wheat leaf senescence. Journal of Experimental Botany, 1984, no 35, p. 659-668.
14. CHENG, S.H. and KAO, C.H. The role of proteolytic enzymes in protein degradation during senescence of rice leaves. Physiologia Plantarum, 1984, no 62, p. 231-237.
15. COTTER, T.G. and AL-RUBEAI, M. Cell death (apoptosis) in cell culture systems. Trends in Biotechnology, 1995, no. 13, p. 150-155.
16. DE JONG, A.J.; HOEBERICHTS, F.A.; YAKIMORA, E.T.; MAXIMORA, E. and WOLTERING, E.J. Chemicalinduced apoptotic cell death in tomato cells: involvement of caspase-like proteases, Planta, 2000, no. 211, p. 656-662.
17. DELPOZO, O. and LAM, E. Caspases and programmed cell death in the hypersensitive response of plants to pathogens. Current Biology,1998, no. 8, p. 1129-1132.
18. DUFF, S.M.; PLAXON, W.C. and LEFEBVRE, P.D. Phosphate-starvation response in plant cells: de novo synthesis and degradation of acid phosphatases. Proceedings of the National Academy of Sciences United States of America, 1991, no. 88, p. 9538-9542.
19. ENARI, M.; SAKAHIRA, H.; YOKOYAMA, H.; OKAWA, K.; IWAMATSU, A. and NAGATA, S. A caspase-activated DNase that degrades DNA during apoptosis and its inhibitor ICAD. Nature, 1998, no. 391, p. 43-50.
20. FINCH, R. Development of protoplast systems for genetic manipulation of rice. Ph.D. Thesis , University of Nottingham, Nottingham, UK, 1991.
21. FORD, D.M. and SHIBLES, R. Photosynthesis and other traits in relation to chloroplast number during soybean leaf senescence. Plant Physiology, 1988, no. 86, p. 109-111.
22. FUKUDA, H.; WATANABE, Y.; KURIYAMA, H.; AOYAGI, S.; SUGIYAMA, M., YAMATO, R.; DEMURA, T. and MINAMI, A. Programming of cell death during xylogenesis. Journal of Plant Research, 1998, no. 111, p. 253-256.
23. FUKUDA, H. Xylogenesis: initiation, progression, and cell death. Annual Review of Plant Physiology and Plant Molecular Biology, 1996, no. 47, p. 299-325.
24. GALLOIS, P.; MAKASHIMA, T.; HECHT, V.; DESPRES, B.; LAUDIE, M.; NISHIMOTO, T. and COOKE, R. An Arabidopsis thaliana cDNA complementing a hamster apoptosis suppressor mutant. Plant Journal, 1997, no. 11, p. 1325-1331.
25. GOLDSTEIN, A.H.; BAERTLIN, D.A. and MCDANIEL, R.G. Phosphate starvation inducible metabolism in Lycopersicon esculentum. Plant Physiology, 1988, no. 87, p. 711-715.
26. GREENBERG, J.T. Programmed cell death: a way of life for plants. Proceedings of the National Academy of Sciences United States of America, 1996, no. 93, p. 12094-12097.
27. HANSON, D.M. and FAIRLEY, J. Enzymes of nucleic acid metabolism from wheat seedlings. Journal of Biological Chemistry, 1969, no. 24, p. 2440-2449.
28. HAVEL, L. and DURZAN, D.J. Apoptosis in plants. Botanica Acta, 1996a, no. 109, p. 268-277.
29. HAVEL, L. and DURZAN, D.J. Apoptosis during diploid parthenogenesis and early somatic embryogenesis of Norway spruce. International Journal of Plant Sciences, 1996b, no. 157, p. 8-16.
30. HUFFAKER, R.C. Proteolytic activity during senescence of plants. New Phytologist, 1990, no. 116, p. 199-231.
31. JONES, A.M. and DANGL, J.F. Logjm at the Styx: programmed cell death in plants. Trends in Plant Science, 1996, no. 1, p. 114-119.
32. KEFALAS, P.S. and YUPSANIS, T. Properties and specificity of a calcium dependent endonuclease from germinated lentil (Lens culinaris). Journal of Plant Physiology, 1995, no. 146, p. 1-9.
33. KLERK, H., and VANLOON, L.C. Characteristics of protein turn over in the developing first leaf of oats (Avena sativa L.). Journal of Plant Physiology, 1997, no. 151, p. 176-187.
34. KÖCK, M.; LÖFFLER, A.; ABEL, S. and GLUND, K. cDNA structure and regulatory properties of a family of starvation-induced ribonucleases from tomato. Plant Molecular Biology, 1995, no. 27, p. 477-485.
35. KOWALSKI, D.; KROEKER, W.D. and LASKOWSKI, M. Mung bean nuclease I. Physical, chemical, and catalytic properties. Biochemistry, 1976, no. 15, p. 4457-4463.
36. KULIGOWSKA, E.; KLARKOWSKA, D. and SZARKOWSKI, J.W. Purification and properties of endonuclease from wheat chloroplasts, specific for singlestranded DNA. Phytochemistry, 1988, no. 5, p. 1275-1279.
37. KUMAR, D.; MUKHERJEE, S.; REDDY, M.K. and TEWARI, K.K. A novel single-strand-specific endonuclease from pea chloroplasts. Journal of Experimental Botany, 1995, no. 46, p. 767-776.
38. LAEMMLI, U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 1970, no. 227, p. 680-685.
39. MARVEL, J.; PERKINS, G.R.; RIVAS, A.L. and COLLINS, M.K.L. Growth factor starvation of BCL-2 overexpressing murine bone marrow cells induced refractoriness to IL-3 stimulation of proliferation. Oncogene, 1994, no. 9, p. 1117-1122.
40. MCCABE, P.F.; LEVINE, A.; MEIJER, P.J.; TAPON, N.A. and PENNEL, R.I. A programmed cell death pathway activated in carrot cells cultured at low cell density. Plant Journal, 1997, no. 12, p. 267-280.
41. MITTLER, R. and LAM, E. Characterisation of nuclease activities and DNA fragmentation induced upon hypersensitive response cell death and mechanical stress. Plant Molecular Biology, 1997, no. 34, p. 209-221.
42. MITTLER, R. and LAM, E. Identification, characterisation, and purification of a tobacco endonuclease activity induced upon hypersensitive response cell death. The Plant Cell, 1995a, no. 7, p. 1951-1962.
43. MITTLER, R. and LAM, E. In situ detection of nDNA fragmentation during the differentiation of tracheary elements in higher plants. Plant Physiology, 1995b, no. 108, p. 489-493.
44. MONOKO, M.; KULIGOWSKA, E. and SZARHOWSKI, W. A single-strand-specific nuclease from a fraction of wheat chloroplast stromal protein. Phytochemistry, 1994, no. 37, p. 301-305.
45. MOSMANN, T. Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays. Journal of Immunological Methods, 1983, no. 65, p. 55-63.
46. MÜLLER, A.J. and GRAFE, R. Isolation and characterisation of cell lines of Nicotiana tabacum lacking nitrate reductase. Molecular and General Genetics, 1978, no. 161, p. 67-76.
47. NAKASHIMA, T.; SEKIGUCHI, T.; KURAOKA, A.; FUKUSHIMA, K.; SHIBATA, Y.; KOMIYAMA, S. and NISHIMOTO, T. Molecular cloning of a human cDNA encoding a novel protein, DAD1, whose defect causes apoptotic cell death in hamster BHK21 cells. Molecular Cell Biology, 1993, no. 13, p. 6367-6374.
48. NOODEN, L.D. and LEOPOLD, A.C. Senescence and Aging in Plants. London, UK. Academic Press Inc.,1988. 526 p. ISBN 0125209207.
49. RYERSON, D.E. and HEATH, M.C. Cleavage of nuclear DNA into oligonucleosomal fragments during cell death induced by fungal infection or by abiotic treatments. The Plant Cell, 1996, no. 8, p. 393-402.
50. SAKAHIRA, H., ENARI, M. and NAGATA, S. Cleavage of CAD inhibitor in CAD activation and DNA degradation during apoptosis. Nature, 1998, no. 391, p. 96-99.
51. SODMERGEN KAWANO, S.; TANO, S. and KUROIWA, T. Degradation of chloroplast DNA in second leaves of rice (Oryza sativa) before leaf yellowing. Protoplasma, 1991, no. 160, p. 89-98.
52. SUGIMOTO, A.; HOZAK, R.R., NAKASHIMA, T. and ROTHAM, J.H. DAD-1, an endogenous programmed cell death suppressor in Caenorhabditis elegans and vertebrates. European Molecular Biology Organisation Journal, 1995, no. 14, p. 4434-4441.
53. TANAKA, Y.; MAKISHIMA, T.; SAABE, M.; ICHINOSE, Y.; SHIRAISHI, T.; NISHIMOTO, T. and YAMADA, T. Dad-1, a putative programmed cell death suppressor gene in rice. Plant Cell Physiology, 1997, no. 38, p. 379-383.
54. THELEN, M.P. and NORTHCOTE, D.H. Identification and purification of a nuclease from Zinnia elegans L.: a potential molecular marker for xylogenesis. Planta, 1989, no. 179, p. 181-195.
55. THOMAS, H. and HOWARTH, C.J. Five ways to stay green. Journal of Experimental Botany, 2000, no. 51, p. 329-337.
56. THOM, M.; MARETZKI, A. and KOMOR, E. Vacuoles from sugarcane suspension cultures. Plant Physiology, 1982, no. 69, p. 1315-1319.
57. TOWILL, L.E. and MAZUR, P. Studies on the reduction of 2,3,5-triphenyltetrazolium chloride as a viability assay for plant tissue cultures. Canadian Journal of Botany, 1975, no. 53, p. 1097-1102.
58. UCHIDA, H.; WU, Y.; TAKADERA, M.; MIYASHITA, S. and NOMURA, A. Purification and some properties of plant endonuclease from scallion bulbs. Bioscience, Biotechnology and Biochemistry, 1993, no. 57, p. 2139-2143.
59. WANG, H.; JUAN, LI.; BOSTOCK, R.M. and GILCHRIST, D.G. Apoptosis: a functional paradigm for programmed plant cell death induced by a host-selective phytotoxin and invoked during development. The Plant Cell, 1996, no. 8, p. 375-391.
60. WILSON, C.M. Plant nucleases. Annual Review of Plant Physiology, 1975, no. 26, p. 187-208.
61. WOOD, M.; POWER, J.B.; DAVEY, M.R.; LOWE, K.C. and MULLIGAN, B.J. Factors affecting single strandpreferring nuclease activity during leaf ageing and darkinduced senescence in barley (Hordeum vulgare L.). Plant Science, 1998, no. 131, p. 149-159.
62. YEN, C.H. and YANG, C.H. Evidence of programmed cell death during leaf senescence in plants. Plant Cell Physiology, 1998, no. 39, p. 922-927.
63. YUPSANIS, T.; ELEFTHERIOU, P. and KELEPIRI, Z. Separation and purification of both acid and neutral nucleases from germinated alfalfa seeds. Journal of Plant Physiology, 1996, no. 149, p. 641-649.