메뉴 건너뛰기




Volumn 273, Issue 2, 2005, Pages 197-206

Proteomic analysis reveals the wide-ranging effects of the novel, iron-responsive regulator RirA in Rhizobium leguminosarum bv. viciae

Author keywords

Iron responsive gene control; nifS; Proteomics; Rhizobium suf genes; RirA regulator

Indexed keywords

ABC TRANSPORTER; BACTERIOCIN; BETA GALACTOSIDASE; DIPHTHERIA TOXIN REPRESSOR; FERRIC UPTAKE REGULATOR; HYBRID PROTEIN; IRON; MUTANT PROTEIN; PHENAZINE; PROTEIN DERIVATIVE; PROTEIN GATB; REGULATOR PROTEIN; REPRESSOR PROTEIN; RHIZOBIUM REGULATORY A PROTEIN; TRANSFER RNA; UNCLASSIFIED DRUG;

EID: 18744373036     PISSN: 16174615     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00438-005-1127-8     Document Type: Article
Times cited : (35)

References (43)
  • 3
    • 4744352703 scopus 로고    scopus 로고
    • Expression of nitrite reductase in Nitrosomonas europaea involves NsrR, a novel nitrite-sensitive transcription regulator
    • Beaumont HJ, Lens SI, Reijnders WN, Westerhoff HV, van Spanning RJ (2004) Expression of nitrite reductase in Nitrosomonas europaea involves NsrR, a novel nitrite-sensitive transcription regulator. Mol Microbiol 54:148-158
    • (2004) Mol Microbiol , vol.54 , pp. 148-158
    • Beaumont, H.J.1    Lens, S.I.2    Reijnders, W.N.3    Westerhoff, H.V.4    Van Spanning, R.J.5
  • 4
    • 0016231913 scopus 로고
    • R factor transfer in Rhizobium leguminosarum
    • Beringer JE (1974) R factor transfer in Rhizobium leguminosarum. J Gen Microbiol 84:188-198
    • (1974) J Gen Microbiol , vol.84 , pp. 188-198
    • Beringer, J.E.1
  • 5
    • 2442670357 scopus 로고    scopus 로고
    • The Sinorhizobium meliloti fur gene regulates, with dependence on Mn(II), transcription of the sitABCD operon, encoding a metal-type transporter
    • Chao TC, Becker A, Buhrmester J, Pühler A, Weidner S (2004) The Sinorhizobium meliloti fur gene regulates, with dependence on Mn(II), transcription of the sitABCD operon, encoding a metal-type transporter. J Bacteriol 186:3609-3620
    • (2004) J Bacteriol , vol.186 , pp. 3609-3620
    • Chao, T.C.1    Becker, A.2    Buhrmester, J.3    Pühler, A.4    Weidner, S.5
  • 6
    • 2942585049 scopus 로고    scopus 로고
    • The Fur-like protein Mur of Rhizobium leguminosarum is a Mn(2+)-responsive transcriptional regulator
    • Diaz-Mireles E, Wexler M, Sawers G, Bellini D, Todd JD, Johnston AWB (2004) The Fur-like protein Mur of Rhizobium leguminosarum is a Mn(2+)-responsive transcriptional regulator. Microbiol-SGM 150:1447-1456
    • (2004) Microbiol-SGM , vol.150 , pp. 1447-1456
    • Diaz-Mireles, E.1    Wexler, M.2    Sawers, G.3    Bellini, D.4    Todd, J.D.5    Johnston, A.W.B.6
  • 7
    • 0034128270 scopus 로고    scopus 로고
    • Corynebacterium diphtheriae genes required for acquisition of iron from haemin and haemoglobin are homologous to ABC haemin transporters
    • Drazek ES, Hammack CA, Schmitt MP (2000) Corynebacterium diphtheriae genes required for acquisition of iron from haemin and haemoglobin are homologous to ABC haemin transporters. Mol Microbiol 36:68-84
    • (2000) Mol Microbiol , vol.36 , pp. 68-84
    • Drazek, E.S.1    Hammack, C.A.2    Schmitt, M.P.3
  • 8
    • 4444256330 scopus 로고    scopus 로고
    • The Sinorhizobium meliloti ABC transporter Cho is highly specific for choline and expressed in bacteroids from Medicago sativa nodules
    • Dupont L, Garcia I, Poggi M-C, Alloing G, Mandon K, Le Rudulier D (2004) The Sinorhizobium meliloti ABC transporter Cho is highly specific for choline and expressed in bacteroids from Medicago sativa nodules. J Bacteriol 186:5988-5996
    • (2004) J Bacteriol , vol.186 , pp. 5988-5996
    • Dupont, L.1    Garcia, I.2    Poggi, M.-C.3    Alloing, G.4    Mandon, K.5    Le Rudulier, D.6
  • 9
    • 0000527903 scopus 로고
    • Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans
    • Figurski DH, Helinski DR (1979) Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc Natl Acad Sci USA 76:1648-1652
    • (1979) Proc Natl Acad Sci USA , vol.76 , pp. 1648-1652
    • Figurski, D.H.1    Helinski, D.R.2
  • 11
    • 3543030412 scopus 로고    scopus 로고
    • The ferric uptake regulator (Fur) protein form Bradyrhizobium japonicum is an iron-responsive repressor in vitro
    • Friedman YE, O'Brian MR (2004) The ferric uptake regulator (Fur) protein form Bradyrhizobium japonicum is an iron-responsive repressor in vitro. J Biol Chem 279:32100-32105
    • (2004) J Biol Chem , vol.279 , pp. 32100-32105
    • Friedman, Y.E.1    O'Brian, M.R.2
  • 12
    • 0037562601 scopus 로고    scopus 로고
    • The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments
    • Gonzalez V et al (2003) The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments. Genome Biol 4:R36
    • (2003) Genome Biol , vol.4
    • Gonzalez, V.1
  • 13
    • 4344682527 scopus 로고    scopus 로고
    • The small RNA regulators of Escherichia coli: Roles and mechanisms
    • Gottesman S (2004) The small RNA regulators of Escherichia coli: roles and mechanisms. Annu Rev Microbiol 58:303-328
    • (2004) Annu Rev Microbiol , vol.58 , pp. 303-328
    • Gottesman, S.1
  • 14
    • 0035053655 scopus 로고    scopus 로고
    • Characterization of the Plesiomonas shigelloides genes encoding the heme iron utilization system
    • Henderson DP, Wyckoff EE, Rashidi CE, Verlei H, Oldham AL (2001) Characterization of the Plesiomonas shigelloides genes encoding the heme iron utilization system. J Bacteriol 183:2715-2723
    • (2001) J Bacteriol , vol.183 , pp. 2715-2723
    • Henderson, D.P.1    Wyckoff, E.E.2    Rashidi, C.E.3    Verlei, H.4    Oldham, A.L.5
  • 15
    • 2342488714 scopus 로고    scopus 로고
    • Phenazines and other redox-active antibiotics promote microbial mineral reduction
    • Hernandez ME, Kappler A, Newman DK (2004) Phenazines and other redox-active antibiotics promote microbial mineral reduction. Appl Environ Microbiol 70:921-928
    • (2004) Appl Environ Microbiol , vol.70 , pp. 921-928
    • Hernandez, M.E.1    Kappler, A.2    Newman, D.K.3
  • 16
    • 0036433469 scopus 로고    scopus 로고
    • Primary and secondary metabolism, and post-translational protein modifications, as portrayed by proteomic analysis of Streptomyces coelicolor
    • Hesketh AR, Chandra G, Shaw AD, Rowland JJ, Kell DB, Bibb MJ, Chater KF (2002) Primary and secondary metabolism, and post-translational protein modifications, as portrayed by proteomic analysis of Streptomyces coelicolor. Mol Microbiol 46:917-932
    • (2002) Mol Microbiol , vol.46 , pp. 917-932
    • Hesketh, A.R.1    Chandra, G.2    Shaw, A.D.3    Rowland, J.J.4    Kell, D.B.5    Bibb, M.J.6    Chater, K.F.7
  • 17
    • 18744411402 scopus 로고    scopus 로고
    • Mechanisms and regulation of iron uptake in the Rhizobia
    • Crosa JH, May AR, Payne SM (eds) ASM Press, Washington
    • Johnston AWB (2004) Mechanisms and regulation of iron uptake in the Rhizobia. In: Crosa JH, May AR, Payne SM (eds) Iron transport in bacteria. ASM Press, Washington, pp 469-488
    • (2004) Iron Transport in Bacteria , pp. 469-488
    • Johnston, A.W.B.1
  • 18
    • 0034974101 scopus 로고    scopus 로고
    • Metals and the rhizobial-legume symbiosis - Uptake, utilization and signalling
    • Johnston AWB, Yeoman KH, Wexler M (2001) Metals and the rhizobial-legume symbiosis - uptake, utilization and signalling. Adv Microb Physiol 45:113-156
    • (2001) Adv Microb Physiol , vol.45 , pp. 113-156
    • Johnston, A.W.B.1    Yeoman, K.H.2    Wexler, M.3
  • 19
    • 0031979601 scopus 로고    scopus 로고
    • The control of Azorhizobium caulinodans nifA expression by oxygen, ammonia and by the HF-I-like protein, NrfA
    • Kaminski PA, Elmerich C (1998) The control of Azorhizobium caulinodans nifA expression by oxygen, ammonia and by the HF-I-like protein, NrfA. Mol Microbiol 28:603-613
    • (1998) Mol Microbiol , vol.28 , pp. 603-613
    • Kaminski, P.A.1    Elmerich, C.2
  • 20
    • 0030986002 scopus 로고    scopus 로고
    • Deletion of two downstream genes alters expression of the hmc operon of Desulfovibrio vulgaris subsp. vulgaris Hildenborough
    • Keon RG, Fu R, Voordouw G (1997) Deletion of two downstream genes alters expression of the hmc operon of Desulfovibrio vulgaris subsp. vulgaris Hildenborough. Arch Microbiol 167:376-383
    • (1997) Arch Microbiol , vol.167 , pp. 376-383
    • Keon, R.G.1    Fu, R.2    Voordouw, G.3
  • 21
    • 0025613780 scopus 로고
    • Isolation of Pseudomonas fluorescens producing phenazine derivatives exclusively under strains conditions of iron deficiency
    • Korth H, Taraz K, Benoni H (1990) Isolation of Pseudomonas fluorescens producing phenazine derivatives exclusively under strains conditions of iron deficiency. Zentralbl Bakteriol 274:433-435
    • (1990) Zentralbl Bakteriol , vol.274 , pp. 433-435
    • Korth, H.1    Taraz, K.2    Benoni, H.3
  • 22
    • 1642565394 scopus 로고    scopus 로고
    • Induction of the sufA operon encoding Fe-S assembly proteins by superoxide generators and hydrogen peroxide: Involvement of OxyR, IHF and an unidentified oxidant-responsive factor
    • Lee JH, Yeo WS, Roe JH (2004) Induction of the sufA operon encoding Fe-S assembly proteins by superoxide generators and hydrogen peroxide: involvement of OxyR, IHF and an unidentified oxidant-responsive factor. Mol Microbiol 51:1745-1755
    • (2004) Mol Microbiol , vol.51 , pp. 1745-1755
    • Lee, J.H.1    Yeo, W.S.2    Roe, J.H.3
  • 23
    • 0035091011 scopus 로고    scopus 로고
    • Genetic organization of the region encoding regulation, biosynthesis, and transport of rhizobactin 1021, a siderophore produced by Sinorhizobium meliloti
    • Lynch D, O'Brien J, Welch T, Clarke P, Cuiv PO, Crosa JH, O'Connell M (2001) Genetic organization of the region encoding regulation, biosynthesis, and transport of rhizobactin 1021, a siderophore produced by Sinorhizobium meliloti. J Bacteriol 183:2576-2585
    • (2001) J Bacteriol , vol.183 , pp. 2576-2585
    • Lynch, D.1    O'Brien, J.2    Welch, T.3    Clarke, P.4    Cuiv, P.O.5    Crosa, J.H.6    O'Connell, M.7
  • 24
    • 0037007078 scopus 로고    scopus 로고
    • A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
    • Masse E, Gottesman S (2002) A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc Natl Acad Sci USA 99:4620-4625
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4620-4625
    • Masse, E.1    Gottesman, S.2
  • 27
    • 0035724183 scopus 로고    scopus 로고
    • Discovery of a haem uptake system in the soil bacterium Bradyrhizobium japonicum
    • Nienaber A, Hennecke H, Fischer H-M (2001) Discovery of a haem uptake system in the soil bacterium Bradyrhizobium japonicum. Mol Microbiol 41:787-800
    • (2001) Mol Microbiol , vol.41 , pp. 787-800
    • Nienaber, A.1    Hennecke, H.2    Fischer, H.-M.3
  • 28
    • 0035982906 scopus 로고    scopus 로고
    • GeneChip expression analysis of the iron starvation response in Pseudomonas aeruginosa: Identification of novel pyoverdine biosynthesis genes
    • Ochsner UA, Wilderman PJ, Vasil AI, Vasil ML (2002) GeneChip expression analysis of the iron starvation response in Pseudomonas aeruginosa: identification of novel pyoverdine biosynthesis genes. Mol Microbiol 45:1277-1287
    • (2002) Mol Microbiol , vol.45 , pp. 1277-1287
    • Ochsner, U.A.1    Wilderman, P.J.2    Vasil, A.I.3    Vasil, M.L.4
  • 29
    • 0242664733 scopus 로고    scopus 로고
    • The SufE protein and the SufBCD complex enhance SufS cysteine desulfurase activity as part of a sulfur transfer pathway for Fe-S cluster assembly in Escherichia coli
    • Outten FW, Wood MJ, Munoz FM, Storz G (2003) The SufE protein and the SufBCD complex enhance SufS cysteine desulfurase activity as part of a sulfur transfer pathway for Fe-S cluster assembly in Escherichia coli. J Biol Chem 278:45713-45719
    • (2003) J Biol Chem , vol.278 , pp. 45713-45719
    • Outten, F.W.1    Wood, M.J.2    Munoz, F.M.3    Storz, G.4
  • 30
    • 2442567822 scopus 로고    scopus 로고
    • A suf operon requirement for Fe-S cluster assembly during iron starvation in Escherichia coli
    • Outten FW, Djaman O, Storz G (2004) A suf operon requirement for Fe-S cluster assembly during iron starvation in Escherichia coli. Mol Microbiol 52:861-872
    • (2004) Mol Microbiol , vol.52 , pp. 861-872
    • Outten, F.W.1    Djaman, O.2    Storz, G.3
  • 31
    • 0032933919 scopus 로고    scopus 로고
    • SufS is a NifS-like protein, and SufD is necessary for stability of the [2Fe-2S] FhuF protein in Escherichia coli
    • Patzer SI, Hantke K (1999) SufS is a NifS-like protein, and SufD is necessary for stability of the [2Fe-2S] FhuF protein in Escherichia coli. J Bacteriol 181:3307-3309
    • (1999) J Bacteriol , vol.181 , pp. 3307-3309
    • Patzer, S.I.1    Hantke, K.2
  • 32
    • 3242774756 scopus 로고    scopus 로고
    • Fur is involved in manganese-dependent regulation of mntA (sitA) expression in Sinorhizobium meliloti
    • Platero R, Peixeto L, O'Brian MR, Fabiano E (2004) Fur is involved in manganese-dependent regulation of mntA (sitA) expression in Sinorhizobium meliloti. Appl Environ Microbiol 70:4349-4355
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4349-4355
    • Platero, R.1    Peixeto, L.2    O'Brian, M.R.3    Fabiano, E.4
  • 33
    • 0036718574 scopus 로고    scopus 로고
    • Identification of a DtxR-regulated operon that is essential for siderophore-dependent iron uptake in Corynebacterium diphtheriae
    • Qian Y, Lee JH, Holmes RK (2002) Identification of a DtxR-regulated operon that is essential for siderophore-dependent iron uptake in Corynebacterium diphtheriae. J Bacteriol 184:4846-4856
    • (2002) J Bacteriol , vol.184 , pp. 4846-4856
    • Qian, Y.1    Lee, J.H.2    Holmes, R.K.3
  • 34
    • 0000474765 scopus 로고
    • The nodD gene of Rhizobium leguminosarum is autoregulatory and in the presence of plant root exudate induces the nodABC genes
    • Rossen L, Shearman CA, Johnston AWB, Downie JA (1985) The nodD gene of Rhizobium leguminosarum is autoregulatory and in the presence of plant root exudate induces the nodABC genes. EMBO J 4:3369-3374
    • (1985) EMBO J , vol.4 , pp. 3369-3374
    • Rossen, L.1    Shearman, C.A.2    Johnston, A.W.B.3    Downie, J.A.4
  • 35
    • 0033778077 scopus 로고    scopus 로고
    • Membrane proteomics: Use of additive main effects with multiplicative interaction model to classify plasma membrane proteins according to their solubility and electrophoretic properties
    • Santoni V, Kieffer S, Desclaux D, Masson F, Rabilloud T (2000) Membrane proteomics: use of additive main effects with multiplicative interaction model to classify plasma membrane proteins according to their solubility and electrophoretic properties. Electrophoresis 21:3329-3344
    • (2000) Electrophoresis , vol.21 , pp. 3329-3344
    • Santoni, V.1    Kieffer, S.2    Desclaux, D.3    Masson, F.4    Rabilloud, T.5
  • 36
    • 0024670832 scopus 로고
    • Novel transcriptional control of the pyruvate formate-lyase gene: Upstream regulatory sequences and multiple promoters regulate anaerobic expression
    • Sawers G, Böck A (1989) Novel transcriptional control of the pyruvate formate-lyase gene: upstream regulatory sequences and multiple promoters regulate anaerobic expression. J Bacteriol 171:2485-2498
    • (1989) J Bacteriol , vol.171 , pp. 2485-2498
    • Sawers, G.1    Böck, A.2
  • 37
    • 0035909963 scopus 로고    scopus 로고
    • IscR, an Fe-S cluster-containing transcription factor, represses expression of Escherichia coli genes encoding Fe-S cluster assembly proteins
    • Schwartz CJ, Giel JL, Patschkowski T, Luther C, Ruzicka, FJ, Beinert H, Kiley PJ (2001) IscR, an Fe-S cluster-containing transcription factor, represses expression of Escherichia coli genes encoding Fe-S cluster assembly proteins. Proc Natl Acad Sci USA 98:14895-14900
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 14895-14900
    • Schwartz, C.J.1    Giel, J.L.2    Patschkowski, T.3    Luther, C.4    Ruzicka, F.J.5    Beinert, H.6    Kiley, P.J.7
  • 39
    • 0344066218 scopus 로고    scopus 로고
    • Identification and characterization of genes required for biosynthesis and transport of the siderophore vibrioferrin in Vibrio parahaemolyticus
    • Tanabe T, Funahashi T, Nakao H, Miyoshi S, Shinoda S, Yamamoto S (2003) Identification and characterization of genes required for biosynthesis and transport of the siderophore vibrioferrin in Vibrio parahaemolyticus. J Bacteriol 185:6938-6949
    • (2003) J Bacteriol , vol.185 , pp. 6938-6949
    • Tanabe, T.1    Funahashi, T.2    Nakao, H.3    Miyoshi, S.4    Shinoda, S.5    Yamamoto, S.6
  • 41
    • 0035725442 scopus 로고    scopus 로고
    • The Rhizobium leguminosarum tonB gene is required for the uptake of siderophore and haem as sources of iron
    • Wexler M, Yeoman KH, Stevens JB, de Luca NG, Sawers G, Johnston AWB (2001) The Rhizobium leguminosarum tonB gene is required for the uptake of siderophore and haem as sources of iron. Mol Microbiol 41:801-816
    • (2001) Mol Microbiol , vol.41 , pp. 801-816
    • Wexler, M.1    Yeoman, K.H.2    Stevens, J.B.3    De Luca, N.G.4    Sawers, G.5    Johnston, A.W.B.6
  • 43
    • 11044224180 scopus 로고    scopus 로고
    • Evidence that the Rhizobium regulatory protein RirA binds to cis-acting Iron-Responsive Operators (IROs) at promoters of some Fe-regulated genes
    • Yeoman KH, Curson ARJ, Todd JD, Sawers G, Johnston AWB (2004) Evidence that the Rhizobium regulatory protein RirA binds to cis-acting Iron-Responsive Operators (IROs) at promoters of some Fe-regulated genes. Microbiology-SGM 150:4065-4074
    • (2004) Microbiology-SGM , vol.150 , pp. 4065-4074
    • Yeoman, K.H.1    Curson, A.R.J.2    Todd, J.D.3    Sawers, G.4    Johnston, A.W.B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.