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Volumn 21, Issue 9, 2005, Pages 2093-2094

SITEBLAST - Rapid and sensitive local alignment of genomic sequences employing motif anchors

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BINDING SITE; COMPUTER PROGRAM; CONSENSUS SEQUENCE; GENE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS;

EID: 18744367841     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti224     Document Type: Article
Times cited : (14)

References (8)
  • 1
    • 0016518897 scopus 로고
    • Efficient string matching: An aid to bibliographic search
    • Aho,A.V. and Corasick,M.J. (1975) Efficient string matching: an aid to bibliographic search. Commun. ACM, 18, 333-340.
    • (1975) Commun. ACM , vol.18 , pp. 333-340
    • Aho, A.V.1    Corasick, M.J.2
  • 3
    • 0345874725 scopus 로고    scopus 로고
    • CONREAL: Conserved regulatory elements anchored alignment algorithm for identification of transcription factor binding sites by phylogenetic footprinting
    • Berezikov,E., Guryev,V., Plasterk,R.H. and Cuppen,E. (2004) CONREAL: conserved regulatory elements anchored alignment algorithm for identification of transcription factor binding sites by phylogenetic footprinting. Genome Res., 14, 170-178.
    • (2004) Genome Res. , vol.14 , pp. 170-178
    • Berezikov, E.1    Guryev, V.2    Plasterk, R.H.3    Cuppen, E.4
  • 5
    • 0032826179 scopus 로고    scopus 로고
    • Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
    • Hertz,G.Z. and Stormo,G.D. (1999) Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics, 15, 563-577.
    • (1999) Bioinformatics , vol.15 , pp. 563-577
    • Hertz, G.Z.1    Stormo, G.D.2
  • 6
    • 2942558697 scopus 로고    scopus 로고
    • On the power of profiles for transcription factor binding site detection
    • Rahmann,S., Mueller,T. and Vingron,M. (2003) On the power of profiles for transcription factor binding site detection. Stat. Appl. Genet. Mol. Biol., 2, 7.
    • (2003) Stat. Appl. Genet. Mol. Biol. , vol.2 , pp. 7
    • Rahmann, S.1    Mueller, T.2    Vingron, M.3
  • 8
    • 0022137059 scopus 로고
    • Transient accumulation of c-fos RNA following serum stimulation requires a conserved 5′ element and c-fos 3′ sequences
    • Treisman,R. (1985) Transient accumulation of c-fos RNA following serum stimulation requires a conserved 5′ element and c-fos 3′ sequences. Cell, 42, 889-902.
    • (1985) Cell , vol.42 , pp. 889-902
    • Treisman, R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.