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Volumn 102, Issue 2, 2004, Pages 199-206

Phylogeny of the Venezuelan arenaviruses

Author keywords

Arenaviridae; Arenavirus; Guanarito virus; Pirital virus; RNA polymerase; Z protein

Indexed keywords

FATTY ACID BINDING PROTEIN; RNA POLYMERASE;

EID: 1842840105     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2004.01.032     Document Type: Article
Times cited : (22)

References (38)
  • 1
    • 0036946482 scopus 로고    scopus 로고
    • High genetic divergence and recombination in arenaviruses from the Americas
    • Archer A.M., Rico-Hesse R. High genetic divergence and recombination in arenaviruses from the Americas. Virology. 304:2002;274-281.
    • (2002) Virology , vol.304 , pp. 274-281
    • Archer, A.M.1    Rico-Hesse, R.2
  • 2
    • 0020040904 scopus 로고
    • Analyses of the genomes of prototype Pichinde arenavirus and a virulent derivative of Pichinde Munchique: Evidence for sequence conservation at the 3′ termini of their viral RNA species
    • Auperin D., Dimock K., Cash P., Rawls W.E., Leung W.C., Bishop D.H. Analyses of the genomes of prototype Pichinde arenavirus and a virulent derivative of Pichinde Munchique: evidence for sequence conservation at the 3′ termini of their viral RNA species. Virology. 116:1982;363-367.
    • (1982) Virology , vol.116 , pp. 363-367
    • Auperin, D.1    Dimock, K.2    Cash, P.3    Rawls, W.E.4    Leung, W.C.5    Bishop, D.H.6
  • 3
    • 0034602928 scopus 로고    scopus 로고
    • RING domains: Master builders of molecular scaffolds?
    • Borden K.L.B. RING domains: master builders of molecular scaffolds? J. Mol. Biol. 295:2000;1103-1112.
    • (2000) J. Mol. Biol. , vol.295 , pp. 1103-1112
    • Borden, K.L.B.1
  • 4
    • 0029975554 scopus 로고    scopus 로고
    • The phylogeny of New World (Tacaribe complex) arenaviruses
    • Bowen M.D., Peters C.J., Nichol S.T. The phylogeny of New World (Tacaribe complex) arenaviruses. Virology. 219:1996;285-290.
    • (1996) Virology , vol.219 , pp. 285-290
    • Bowen, M.D.1    Peters, C.J.2    Nichol, S.T.3
  • 5
    • 0031297630 scopus 로고    scopus 로고
    • Phylogenetic analysis of the Arenaviridae: Patterns of virus evolution and evidence for cospeciation between arenaviruses and their rodent hosts
    • Bowen M.D., Peters C.J., Nichol S.T. Phylogenetic analysis of the Arenaviridae: patterns of virus evolution and evidence for cospeciation between arenaviruses and their rodent hosts. Mol. Phylogenet. Evol. 8:1997;301-316.
    • (1997) Mol. Phylogenet. Evol. , vol.8 , pp. 301-316
    • Bowen, M.D.1    Peters, C.J.2    Nichol, S.T.3
  • 6
    • 0001142645 scopus 로고    scopus 로고
    • Arenaviridae: The viruses and their replication
    • Knipe, D.M., Howley, P.M., Griffin, D.E., Lamb, R.A., Martin, M.A. Roizman, B. (Eds.), Lippincott, Williams and Wilkins, Philadelphia
    • Buchmeier, M.J., Bowen, M.D., Peters, C.J., 2001. Arenaviridae: the viruses and their replication. In: Knipe, D.M., Howley, P.M., Griffin, D.E., Lamb, R.A., Martin, M.A. Roizman, B. (Eds.), Fields Virology, vol. II., 4th ed. Lippincott, Williams and Wilkins, Philadelphia, pp. 1635-68.
    • (2001) Fields Virology, Vol. II., 4th Ed. , vol.2 , pp. 1635-1668
    • Buchmeier, M.J.1    Bowen, M.D.2    Peters, C.J.3
  • 7
    • 0142088791 scopus 로고    scopus 로고
    • Phylogenetic analysis reveals a low rate of homologous recombination in negative-sense RNA viruses
    • Chare E.R., Gould E.A., Holmes E.C. Phylogenetic analysis reveals a low rate of homologous recombination in negative-sense RNA viruses. J. Gen. Virol. 84:2003;2691-2703.
    • (2003) J. Gen. Virol. , vol.84 , pp. 2691-2703
    • Chare, E.R.1    Gould, E.A.2    Holmes, E.C.3
  • 8
    • 0036389713 scopus 로고    scopus 로고
    • Phylogeny of New World arenaviruses based on the complete coding sequences of the small genomic segment identified an evolutionary lineage produced by intrasegmental recombination
    • Charrel R.N., Feldmann H., Fulhorst C.F., Khelifa R., de Chesse R., de Lamballerie X. Phylogeny of New World arenaviruses based on the complete coding sequences of the small genomic segment identified an evolutionary lineage produced by intrasegmental recombination. Biochem. Biophys. Res. Commun. 296:2002;1118-1124.
    • (2002) Biochem. Biophys. Res. Commun. , vol.296 , pp. 1118-1124
    • Charrel, R.N.1    Feldmann, H.2    Fulhorst, C.F.3    Khelifa, R.4    De Chesse, R.5    De Lamballerie, X.6
  • 9
    • 0035837053 scopus 로고    scopus 로고
    • The Whitewater Arroyo virus: Natural evidence for genetic recombination among Tacaribe serocomplex viruses (family Arenaviridae)
    • Charrel R.N., de Lamballerie X., Fulhorst C.F. The Whitewater Arroyo virus: natural evidence for genetic recombination among Tacaribe serocomplex viruses (family Arenaviridae). Virology. 283:2001a;161-166.
    • (2001) Virology , vol.283 , pp. 161-166
    • Charrel, R.N.1    De Lamballerie, X.2    Fulhorst, C.F.3
  • 10
    • 0034804652 scopus 로고    scopus 로고
    • Nucleotide sequence of the Pirital virus (family Arenaviridae) small genomic segment
    • Charrel R.N., de Micco P., Fulhorst C.F. Nucleotide sequence of the Pirital virus (family Arenaviridae) small genomic segment. Biochem. Biophys. Res. Commun. 280:2001b;1402-1407.
    • (2001) Biochem. Biophys. Res. Commun. , vol.280 , pp. 1402-1407
    • Charrel, R.N.1    De Micco, P.2    Fulhorst, C.F.3
  • 11
    • 0002508007 scopus 로고
    • Ecology and epidemiology of arenaviruses and their replication
    • M. Salvato (Ed.), Plenum Press, New York
    • Childs, J.E., Peters, C.J., 1993. Ecology and epidemiology of arenaviruses and their replication. In: M. Salvato (Ed.), The Arenaviridae. Plenum Press, New York, pp. 331-84.
    • (1993) The Arenaviridae , pp. 331-384
    • Childs, J.E.1    Peters, C.J.2
  • 13
    • 0034855641 scopus 로고    scopus 로고
    • RING finger Z protein of lymphocytic choriomeningitis virus (LCMV) inhibits transcription and RNA replication of an LCMV S-segment minigenome
    • Cornu T.I., de la Torre J.C. RING finger Z protein of lymphocytic choriomeningitis virus (LCMV) inhibits transcription and RNA replication of an LCMV S-segment minigenome. J. Virol. 75:2001;9415-9426.
    • (2001) J. Virol. , vol.75 , pp. 9415-9426
    • Cornu, T.I.1    De La Torre, J.C.2
  • 14
    • 0036281854 scopus 로고    scopus 로고
    • Characterization of the arenavirus RING finger Z protein regions required for Z-mediated inhibition of viral RNA synthesis
    • Cornu T.I., de la Torre J.C. Characterization of the arenavirus RING finger Z protein regions required for Z-mediated inhibition of viral RNA synthesis. J. Virol. 76:2002;6678-6688.
    • (2002) J. Virol. , vol.76 , pp. 6678-6688
    • Cornu, T.I.1    De La Torre, J.C.2
  • 15
    • 0030819117 scopus 로고    scopus 로고
    • Completion of the Lassa fever virus sequence and identification of a RING finger open reading frame at the L RNA 5′ end
    • Djavani M., Lukashevich I.S., Sanchez A., Nichol S.T., Salvato M.S. Completion of the Lassa fever virus sequence and identification of a RING finger open reading frame at the L RNA 5′ end. Virology. 235:1997;414-418.
    • (1997) Virology , vol.235 , pp. 414-418
    • Djavani, M.1    Lukashevich, I.S.2    Sanchez, A.3    Nichol, S.T.4    Salvato, M.S.5
  • 16
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution. 39:1985;783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 21
    • 0029073113 scopus 로고
    • Molecular phylogeny of Guanarito virus, an emerging arenavirus affecting humans
    • Gonzalez J.P., Sanchez A., Rico-Hesse R. Molecular phylogeny of Guanarito virus, an emerging arenavirus affecting humans. Am. J. Trop. Med. Hyg. 53:1995;1-6.
    • (1995) Am. J. Trop. Med. Hyg. , vol.53 , pp. 1-6
    • Gonzalez, J.P.1    Sanchez, A.2    Rico-Hesse, R.3
  • 22
    • 0024448518 scopus 로고
    • The 5′ region of Tacaribe virus L RNA encodes a protein with a potential metal binding domain
    • Iapalucci S., Lopez N., Rey O., Zakin M.M., Cohen G.N., Franze-Fernandez M.T. The 5′ region of Tacaribe virus L RNA encodes a protein with a potential metal binding domain. Virology. 173:1989a;357-361.
    • (1989) Virology , vol.173 , pp. 357-361
    • Iapalucci, S.1    Lopez, N.2    Rey, O.3    Zakin, M.M.4    Cohen, G.N.5    Franze-Fernandez, M.T.6
  • 24
    • 0028092329 scopus 로고
    • Molecular anatomy of viral RNA-directed RNA polymerases
    • Ishihama A., Barbier P. Molecular anatomy of viral RNA-directed RNA polymerases. Arch. Virol. 134:1994;235-258.
    • (1994) Arch. Virol. , vol.134 , pp. 235-258
    • Ishihama, A.1    Barbier, P.2
  • 25
    • 18144444991 scopus 로고    scopus 로고
    • Tacaribe virus Z protein interacts with the L polymerase protein to inhibit viral RNA synthesis
    • Jacamo R., Lopez N., Wilda M., Franze-Fernandez M.T. Tacaribe virus Z protein interacts with the L polymerase protein to inhibit viral RNA synthesis. J. Virol. 77:2003;10383-10393.
    • (2003) J. Virol. , vol.77 , pp. 10383-10393
    • Jacamo, R.1    Lopez, N.2    Wilda, M.3    Franze-Fernandez, M.T.4
  • 26
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis computer software
    • Kumar S., Tamura K., Jakobsen I.B., Nei M. MEGA2: molecular evolutionary genetics analysis computer software. Bioinformatics. 17:2001;1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 27
    • 0031052955 scopus 로고    scopus 로고
    • The Lassa fever virus L gene: Nucleotide sequence, comparison, and precipitation of a predicted 250-kDa protein with monospecific antiserum
    • Lukashevich I.S., Djavani M., Shapiro K., Sanchez A., Ravkov E., Nichol S.T., Salvato M.S. The Lassa fever virus L gene: nucleotide sequence, comparison, and precipitation of a predicted 250-kDa protein with monospecific antiserum. J. Gen. Virol. 78:1997;547-551.
    • (1997) J. Gen. Virol. , vol.78 , pp. 547-551
    • Lukashevich, I.S.1    Djavani, M.2    Shapiro, K.3    Sanchez, A.4    Ravkov, E.5    Nichol, S.T.6    Salvato, M.S.7
  • 29
    • 0028176691 scopus 로고
    • Rift valley fever virus L segment: Correction of the sequence and possible functional role of newly identified regions conserved in RNA-dependent polymerases
    • Müller R., Poch O., Delarue M., Bishop D.H.L., Bouloy M. Rift valley fever virus L segment: correction of the sequence and possible functional role of newly identified regions conserved in RNA-dependent polymerases. J. Gen. Virol. 75:1994;1345-1352.
    • (1994) J. Gen. Virol. , vol.75 , pp. 1345-1352
    • Müller, R.1    Poch, O.2    Delarue, M.3    Bishop, D.H.L.4    Bouloy, M.5
  • 30
    • 0024784519 scopus 로고
    • Identification of four conserved motifs among the RNA-dependent polymerase encoding elements
    • Poch O., Sauvaget I., Delarue M., Tordo N. Identification of four conserved motifs among the RNA-dependent polymerase encoding elements. EMBO J. 8:1989;3867-3874.
    • (1989) EMBO J. , vol.8 , pp. 3867-3874
    • Poch, O.1    Sauvaget, I.2    Delarue, M.3    Tordo, N.4
  • 32
    • 0032243020 scopus 로고    scopus 로고
    • Venezuelan hemorrhagic fever: Eight years of observation (Spanish)
    • Salas R.A., de Manzione N., Tesh R. Venezuelan hemorrhagic fever: eight years of observation (Spanish). Acta Cient. Venez. 49(Suppl. 1):1998;46-51.
    • (1998) Acta Cient. Venez. , vol.49 , Issue.SUPPL. 1 , pp. 46-51
    • Salas, R.A.1    De Manzione, N.2    Tesh, R.3
  • 33
    • 0024435307 scopus 로고
    • The completed sequence of lymphocytic choriomeningitis virus reveals a unique RNA structure and a gene for a zinc finger protein
    • Salvato M.S., Shimomaye E.M. The completed sequence of lymphocytic choriomeningitis virus reveals a unique RNA structure and a gene for a zinc finger protein. Virology. 173:1989;1-10.
    • (1989) Virology , vol.173 , pp. 1-10
    • Salvato, M.S.1    Shimomaye, E.M.2
  • 34
    • 0024503186 scopus 로고
    • The primary structure of the lymphocytic choriomeningitis virus L gene encodes a putative RNA polymerase
    • Salvato M., Shimomaye E., Oldstone M.B. The primary structure of the lymphocytic choriomeningitis virus L gene encodes a putative RNA polymerase. Virology. 169:1989;377-384.
    • (1989) Virology , vol.169 , pp. 377-384
    • Salvato, M.1    Shimomaye, E.2    Oldstone, M.B.3
  • 35
    • 0000557443 scopus 로고    scopus 로고
    • Arenaviruses
    • Fields, B.N., Knipe, D.M., Howley, P.M., Chanock, R.M., Melnick, J.L., Monath, T.P., Roizman, B., Straus, S.E. (Eds.), Lippincott-Raven, Philadelphia
    • Southern, P.J., 1996. Arenaviruses. In: Fields, B.N., Knipe, D.M., Howley, P.M., Chanock, R.M., Melnick, J.L., Monath, T.P., Roizman, B., Straus, S.E. (Eds.), Fields Virology, vol. II, 3rd ed. Lippincott-Raven, Philadelphia, pp. 1505-19.
    • (1996) Fields Virology, Vol. II, 3rd Ed. , vol.2 , pp. 1505-1519
    • Southern, P.J.1
  • 37
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 38
    • 0034606711 scopus 로고    scopus 로고
    • Guanarito virus (Arenaviridae) isolates from endemic and outlying localities in Venezuela: Sequence comparisons among and within strains isolated from Venezuelan hemorrhagic fever patients and rodents
    • Weaver S.C., Salas R.A., de Manzione N., Fulhorst C.F., Duno G., Utrera A., Mills J.N., Ksiazek T.G., Tovar D., Tesh R.B. Guanarito virus (Arenaviridae) isolates from endemic and outlying localities in Venezuela: sequence comparisons among and within strains isolated from Venezuelan hemorrhagic fever patients and rodents. Virology. 266:2000;189-195.
    • (2000) Virology , vol.266 , pp. 189-195
    • Weaver, S.C.1    Salas, R.A.2    De Manzione, N.3    Fulhorst, C.F.4    Duno, G.5    Utrera, A.6    Mills, J.N.7    Ksiazek, T.G.8    Tovar, D.9    Tesh, R.B.10


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