Body plan evolution of ascomycetes, as inferred from an RNA polymerase II phylogeny

Proceedings of the National Academy of Sciences of the United States of America

Volumn 101, Issue 13, 2004, Pages 4507-4512

  Liu, Yajuan J ^a   Hall, Benjamin D ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RNA POLYMERASE II;

ARTICLE; ASCOMYCETES; ASPERGILLUS; EVOLUTION; FUNGUS HYPHAE; MORPHOGENESIS; MYCELIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; ONTOGENY; PRIORITY JOURNAL; RPB2 GENE; TRICHOPHYTON;

ASCOMYCOTA; EVOLUTION, MOLECULAR; LICHENS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA POLYMERASE II;

ASCOMYCOTA; ASPERGILLUS; EUROTIOMYCETES; FUNGI; LECANORALES; PEZIZOMYCOTINA; SACCHAROMYCOTINA; TAPHRINOMYCOTINA; TRICHOPHYTON;

EID: 1842532972     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0400938101     Document Type: Article

References (41)

1. Hawksworth, W. L., Kirk, P. M., Sutton, B. C. & Pegler, D. N. (1995) Ainsworth & Bisby's Dictionary of the Fungi (CAB International, Wallingford, Oxon, U.K.).
2. Eriksson, O. (1981) Opera Botanica 60, 1-220.
3. Luttrell, E. S. (1951) Univ. Mo. Stud. 3, 1-120.
4. Luttrell, E. S. (1955) Mycologia 47, 511-532.
5. Nannfeldt, J. A. (1932) Nova Acta Regiae Soc. Sci. Ups. 8, 1-368.
6. Reynolds, D. R. (1981) Ascomycete Systematics: The Luttrellian Concept (Springer, New York).
7. Barr, M. E. (2001) in The Mycota. eds. Esser, K. & Lemke, P. A. (Springer, Berlin), Vol. 7, pp. 161-177.
8. Berbee, M. L. (2001) Physiol. Mol. Plant Pathol. 59, 165-187.
9. Nishida, H. & Sugiyama, J. (1994) Mycoscience 35, 361-366.
10. Spatafora, J. W. (1995) Can. J. Bot. 73, S811-S815.
11. Eriksson, O. E. & Winka, K. (1997) Myconet 1, 1-16.
12. Eriksson, O. V. & Winka, K. (1998) Myconet 1, 17-24.
13. Sicheritz-Ponten, T. & Andersson, S. G. (2001) Nucleic Acids Res. 29, 545-552.
14. Liu, Y., Whelen, S. & Hall, B. (1999) Mol. Biol. Evol. 16, 1799-1808.
15. Matheny, P. B. (2003) in Biology (Univ. of Washington, Seattle), pp. 214.
16. Matheny, P. B., Liu, Y. J., Ammirati, J. F. & Hall, B. D. (2002) Am. J. Bot. 89, 688-698.
17. Eriksson. O. E., Baral, H.-O., Currah, R. S., Hansen, K., Kurtzman, C. P., Rambold, G. & Laessøe, T. (2002) Outline of Fungi, Myconet Umeå, issue 8 (December 2, 2002), available at www.umu.se/myconet/Myconet.html.
18. Thompson, J. D., Plewniak, F. & Poch, O. (1999) Nucleic Acids Res. 27, 2682-2690.
19. Swofford, D. L. (2003) PAUP*, Phylogenettc Analyses Using Parsimony (*and Other Methods), (Sinauer, Sunderland, MA), version 4.0b10.
20. Felsenstein, J. (1981) Biol. J. Linn. Soc. 16, 183-196.
21. Jones, D. T., Taylor, W. R. & Thornton, J. M. (1992) Comput. Appl. Biosci. 8, 275-282.
22. Huelsenheck, J. P. & Ronquist, J. P. (2001) Biometrics 17, 754-755.
23. Hillis, D. M. & Bull, J. J. (1993) Syst. Biol. 42, 182-192.
24. Rannala, B. & Yang, Z. (1996) J. Mol. Evol. 43, 304-311.
25. Murphy, W. J., Eizirik, E., O'Brien, S. J., Madsen, O., Scally, M., Douady, C. J., Teeling, E., Ryder, O. A., Stanhope, M. J., de Jong, W. W. & Springer, M. S. (2001) Science 294, 2348-2351.
26. Karol, K. G., McCourt, R. M., Cimino, M. T. & Delwiche. C. F. (2001) Science 294, 2351-2353.
27. Lutzoni, F., Pagel, M. & Reeb, V. (2001) Nature 411, 937-940.
28. LoBuglio, K. F., Berbee, M. L. & Taylor, J. W. (1996) Mol. Phylogenet. Evol. 6, 287-294.
29. Berbee, M. L. (1996) Mol. Biol. Evol. 13, 462-470.
30. Landvik, S., Eriksson, O. E. & Berbee, M. (2001) Mycologia 93, 1151-1163.
31. O'Donnell, K. O., Cigelnik, E., Weber, N. S. & Trappe, J. M. (1997) Mycologia 89, 48-65.
32. Kurtzman, C. P. & Robnett, C. J. (1995) Can. J. Bot. 73, S824-S830.
33. Redhead, S. A. (1977) Can. J. Bot. 55, 301-306.
34. Korf, R. P. (1973) in The Fungi, eds. Ainsworth, G. C., Sparrow, F. K. & Sussman, A. S. (Academic, New York). Vol. 9A, pp. 249-319.
35. Gargas, A. & Taylor, J. W. (1995) Exp. Mycol. 19, 7-15.
36. Alexopoulos, C. J., Mims, C. W. & Blackwell, M. (1996) Introductory Mycology (Wiley, New York).
37. Haase, G., Sonntag, L., Peer, Y. V. D., Uijthof, J. M. J., Podbielski, A. & Melzer-Krick, B. (1995) Antonie Leeuwenhoek 68, 19-33.
38. Winka, K., Eriksson, O. E. & Bång, A. (1998) Mycologia 90, 822-830.
39. Sherwood, M. A. (1981) Bot. J. Linn. Soc. 82, 15-34.
40. Hafellner, J. (1994) in Ascomycete Systematics: Problems and Perspectives in the Nineties, ed. Hawksworth., D. L. (Plenum, New York), pp. 315-320.
41. Hafellner, J. (1988) in CRC Handbook of Lichenology, ed. Galun, M. (CRC, Boca Raton, FL). Vol. 3, pp. 41-52.