Phylogenetic origins of the asexual mycorrhizal symbiont Cenococcum geophilum Fr. And other mycorrhizal fungi among the ascomycetes

Molecular Phylogenetics and Evolution

Volumn 6, Issue 2, 1996, Pages 287-294

  Lobuglio, Katherine F ^a   Berbee, Mary L ^b   Taylor, John W ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ASCOMYCOTA; CENOCOCCUM GEOPHILUM; ELAPHOMYCES; FUNGI; LOCULOASCOMYCETES; PLECTOMYCETES; PLEOSPORALES; PYRENOMYCETES;

FUNGAL DNA; RNA 18S;

ARTICLE; ASCOMYCETES; CLASSIFICATION; DEUTEROMYCETES; GENETICS; MOLECULAR GENETICS; PHYLOGENY;

ASCOMYCOTA; DNA, FUNGAL; MITOSPORIC FUNGI; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 18S;

EID: 0030253237     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1996.0077     Document Type: Article

References (68)

1. Alexopolous, C. J., and Mims, C. W. (1979). "Introductory Mycology," Wiley, New York.
2. Benny, G. L., and Kimbrough, J. W. (1980). A synopsis of the orders and families of Plectomycetes with keys to genera. Mycotaxon 12(1): 1-91.
3. Berbee, M. L., and Taylor, J. W. (1992). 18S ribosomal RNA gene sequence characters place the human pathogen Sporothrix schenckii in the genus Ophiostoma. Exp. Mycol. 16: 87-91.
4. Berbee, M. L., and Taylor, J. W. (1993). Dating the Evolutionary radiations of the true fungi. Can. J. Bot. 71: 114-1127.
5. Berbee, M. L. (1996). Loculoascomycete origins and evolution of filamentous ascomycete morphology from 18S rRNA gene sequence data. Mol. Biol. Evol. 13(3): 462-470.
6. Bessey, E. A. (1950). "Morphology and Taxonomy of Fungi," Blakiston, Philadelphia.
7. Bruns, T. D. (1995). Thoughts on the processes that maintain local species diversity of ectomycorrhizal fungi. Plant Soil 170(1): 63-73.
8. Burt, A., Carter, D. A., Koenig, G. L., White, T. J., and Taylor, J. W. (1996). Molecular markers and sex in the human pathogen Coccidioides immitis (Ascomycota). Proc. Natl. Acad. Sci. 93: 770-773.
9. Chilvers, G. A. (1968). Some distinctive types of eucalypt mycorrhiza. Aust. J. Bot. 16: 49-70.
10. Dodge, B. O. (1929). The higher Plectascales. Ann. Mycol. 37: 145-184.
11. Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
12. Felsenstein, J. (1994). "PHYLIP-Phylogenetic Inference Package, version 3.56c," Computer programs distributed by the author, Department of Genetics, University of Washington, Seattle.
13. Fennell, D. I. (1973). Plectomycetes; Eurotiales. In "The Fungi. Vol IVA" (G. C. Ainsworth, F. K. Sparrow, and A. S. Sussman, Eds.), pp. 45-68, Academic Press, New York.
14. Ferdinandsen, C., and Winge, O. (1925). Cenococcum Fr. A monographic study. Kgl. Veterinaer Landbohojsk. Aarsskr. 1925: 332-382.
15. Fischer, E. (1938). Tuberinae. Naturl. Pflanzenfam. 5b, viii, 1-42.
16. Gargas, A., DePriest, P. T., Grube, M., and Tehler, A. (1995). Multiple origins of lichen symbiosis in fungi suggested by SSU rDNA phylogeny. Science 268: 1492-1495.
17. Gargas, A., and Taylor, J. W. (1992). Polymerase chain reaction (PCR) primers for amplifying and sequencing nuclear 18S rDNA from lichenized fungi. Mycologia 84(4): 589-592.
18. Gaumann, E. A. (1964). "Die Pilze," Birkhauser Verlag, Basel.
19. Geiser, D. M., Timberlake, W. E., and Arnold, M. L. (1996). Loss of meiosis in Aspergillus. Mol. Biol. Evol. 13(6): 809-817.
20. Gilkey, H. M. (1939). Tuberales of North America. Ore. State Monogr. Bot. 1: 1-63.
21. Guadet, J., Julien, J., Lafay, J. F., and Brygoo, Y. (1989). Phylogeny of some Fusarium species, as determined by large-subunit rRNA sequence comparison. Mol. Biol. Evol. 6: 227-242.
22. Harney, S. K. (1994). "Dematiaceous Endophytes from Plant Roots: Molecular Characterization and Interactions," Ph.D. dissertation, State University of New York, College of Environmental Science and Forestry, Syracuse, NY.
23. Hawker, L. E. (1954). British hypogeous fungi. Philos. Trans. R. Soc. London, Ser. B. 237: 429-546.
24. Hawksworth, D. L. (1986). The evolution and adaptation of sexual reproductive structures in the Ascomycotina. In "Symposium of the British Mycological Society" (A. D. M. Rayner, C. M. Brasier, and D. Moore, Eds.), pp. 179-189, Cambridge Univ. Press, Cambridge.
25. Hawksworth, D. L., and Booth, C. (1974). A revision of the genus Zopfia Rabenh. Mycol. Pap. 135: 1-38.
26. Hawksworth, D. L., Sutton, B. C., and Ainsworth, G. C. (1983). "Ainsworth and Bisby's Dictionary of the Fungi," Commonwealth Mycological Inst., Kew, Surrey.
27. Kishino, H., and Hasegawa, M. (1989). Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of the Hominoidea. J. Mol. Evol. 29: 170-179.
28. Korf, R. P. (1973). Discomycetes and Tuberales. In "The Fungi. Vol IVA" (G. C. Ainsworth, F. K. Sparrow, and A. S. Sussman, Eds.), pp. 249-319, Academic Press, New York.
29. Landvik, S., and Eriksson, O. E. (1994a). Relationship of the genus Glaziella (Ascomycota) inferred from 18S rDNA sequences. Syst. Ascomycetum 13(1): 13-23.
30. Landvik, S., and Eriksson, O. E. (1994b). Relationships of Tuber, Elaphomyces, and Cyttaria (Ascomycotina), inferred from 18S rDNA studies. In "Ascomycete Systematics: Problems and Perspectives in the Nineties" (D. L. Hawksworth, Ed.), pp. 225-231, Plenum, New York.
31. Linhell, D. (1942). Cenococcum graniforme als Mykorrizabildner von Waldbaumen. Sym. Bot. Upsaliensis. 5: 1-18.
32. LoBuglio, K. F., Rogers, S. O., and Wang, C. J. K. (1991). Variation in ribosomal DNA among isolates of the mycorrhizal fungus Cenococcum geophilum Fr. Can. J. Bot. 69: 2331-2343.
33. LoBuglio, K. F., Pitt, J. I., and Taylor, J. W. (1993). Phylogenetic analysis of two ribosomal DNA regions indicates multiple independent losses of asexual Talaromyces state among asexual Penicillium species in subgenus Biverticillium. Mycologia 85(4): 592-604.
34. LoBuglio, K. F., Pitt, J. I., and Taylor, J. W. (1994). Phylogenetic origins of the synnematous Penicillium species, P. duclauxii, P. clavigerum, and P. vulpinum, as assessed by two ribosomal DNA regions. Mycol. Res. 98(2): 250-256.
35. Maddison, W. P., and Maddison, D. R. (1992). "MacClade," Sinauer, Sunderland, MA.
36. Malloch, D., and Cain, R. (1970). Five new genera in the new family Pseudeurotiacea. Can. J. Bot. 48: 1815-1825.
37. Massicotte, H. B., Trappe, J. M., Peterson, R. L., and Melville, L. H. (1992). Studies on Cenococcum geophilum. II. Sclerotium morphology, germination, and formation in pure culture and growth pouches. Can. J. Bot. 70: 125-132.
38. Mikola, P. (1948). On the physiology and ecology of Cenococcum graniforme especially as a mycorrhizal fungus of birch. Inst. Forest. Fenn. Commun. 36: 1-104.
39. Miller, O. R., Miller, S. L., and Palmer, J. G. (1983). Description and identification of selected mycorrhizal fungi in pure culture. Mycotaxon 18(2): 457-481.
40. Miller, S. L., and Miller, O. K. (1984). Synthesis of Elaphomyces muricatus + Pinus sylvestris ectomycorrhizae. Can. J. Bot. 62: 2363-2369.
41. Molina, R., and Trappe, J. M. (1982). Patterns of ectomycorrhizal host specificity and potential among pacific northwest conifers and fungi. For. Sci. 28: 423-458.
42. Molina, R., and Trappe, J. M. (1984). Mycorrhiza management in nurseries. In "Forest Nursery Manual: Production of Bareroot Seedlings" (M. L. Duryea and T. D. Landis, Eds.), pp. 211-223, Martinus Nijhoff/Junk, The Hague.
43. O'Dell, T. E., and Trappe, J. M. (1992). Root endophytes of lupin and some other legumes in Northwestern USA. New Phytol. 122: 479-485.
44. O'Dell, T. E., Massicotte, H. B., and Trappe, J. M. (1993). Root colonization of Lupinus latifolius Agardh. and Pinus contorta Dougl. by Phialocephala fortinii Wang & Wilcox. New Phytol. 124: 93-100.
45. O'Donnell, K. (1993). Fusarium and its near relatives. In "The Fungal Holomorph: A Consideration of Mitotic and Pleomorphic Speciation" (D. R. Reynolds and J. W. Taylor, Eds.), pp. 225-233, CAB Int., Wallingford, UK.
46. Read, D. J., and Haselwandter, K. (1981). Observations on the mycorrhizal status of some alpine plant communities. New Phytol. 88: 341-352.
47. Rehner, S. A., and Samuels, G. J. (1994). Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycol. Res. 98(6): 625-634.
48. Rogers, S. O., and Bendich, A. J. (1985). Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues. Plant Mol. Biol. 5: 69-76.
49. Shinohara, M. L. (1994). "Molecular Evolutionary Study of Cenococcum geophilum," Ph.D. dissertation, State University of New York, College of Environmental Science and Forestry, Syracuse, NY.
50. Simon, L., Bousquet, J., Levesque, R. C., and Lalonde, M. (1993). Origin and diversification of endomycorrhizal fungi and coincidence with vascular land plants. Nature 363: 67-69.
51. Stoyke, G., and Currah, R. S. (1990). Endophytic fungi from the mycorrhizae of alpine ericoid plants. Can. J. Bot. 69: 347-352.
52. Stoyke, G., Egger, K. N., and Currah, R. S. (1992). Characterization of sterile endophytic fungi from the mycorrhizae of subalpine plants. Can. J. Bot. 70: 2009-2016.
53. Swann, E. C., Saenz, G. S., and Taylor, J. W. (1991). Maximizing information content of morphological specimens: Herbaria as sources of DNA for molecular systematics. Mycol. Soc. Am. Newsl. 42(1): 36.
54. Swofford, D. L. (1991). "PAUP: Phylogenetic Analysis Using Parsimony, version 3.1," Computer program distributed by the Illinois Natural History Survey, Champaign, Illinois.
55. Taylor, J. W. (1995). Making the Deuteromycota redundant: a practical integration of mitosporic and meiosporic fungi. Can. J. Bot. 73(Suppl. 1):S754-S759.
56. Trappe, J. M. (1962). Fungus associates of ectotrophic mycorrhizae. Bot. Rev. 28: 538-606.
57. Trappe, J. M. (1962a). "Cenococcum graniforme - Its Distribution, Ecology, Mycorrhiza and Inherent Variation," Ph.D. Dissertation, University of Washington, Seattle, WA.
58. Trappe, J. M. (1964). Mycorrhizal host and distribution of Cenococcum graniforme. Lloydia 27(2): 100-106.
59. Trappe, J. M. (1966). Cenococcum graniforme in Mexico. Mycologia 58: 647-648.
60. Trappe, J. M. (1969). Studies on Cenococcum graniforme. I. An efficient method for isolation from sclerotia. Can. J. Bot. 47: 1389-1390.
61. Trappe, J. M. (1971). Mycorrhiza-Forming Ascomycetes. In "Mycorrhizae: Proceedings of the First North American Conference on Mycorrhizae" (E. Hacskaylo, Ed.), U.S.D.A. Forest Service, misc. publ. 1189.
62. Trappe, J. M. (1979). The orders, families, and genera of hypogeous ascomycotina (truffles and their relatives). Mycotaxon 9: 297-340.
63. Vogt, K. A., Edmonds, R. L., and Grier, C. C. (1981). Dynamics of ectomycorrhizae in Abies amabilis stands: The role of Cenococcum graniforme. Holarctic Ecol. 4:167-173.
64. Wang, C. J. K., and Wilcox, H. E. (1985). New species of ectendomycorrhizal and pseudomycorrhizal fungi: Phialophora finlandia, Chloridium paucisporum, and Phialocephala fortinii. Mycologia 77:(6): 951-958.
65. Werdermann, E. (1954). Fungi. Pilze. In "Syllabus der Planzenfamilien" (A. Engler, Ed.), p. 156, Gerbruder Borntraeger, Berlin.
66. White, T. J., Bruns, T. D., Lee, S., and Taylor, J. W. (1990). Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. In "PCR Protocols" (M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White, Eds.), pp. 315-322, Academic Press, San Diego.
67. Wilcox, H. E., and Wang, C. J. K. (1987a). Ectomycorrhizal and ectendomycorrhizal associations of Phialophora finlandia with Pinus resinosa, Picea rubens, and Betula alleghaniensis. Can. J. For. Res. 17: 976-990.
68. Wilcox, H. E., and Wang, C. J. K. (1987b). Mycorrhizal and pathological associations of dematiaceous fungi in roots of 7-month-old tree seedlings. Can. J. For. Res. 17: 884-899.