Large structure rearrangement of colicin Ia channel domain after membrane binding from 2D 13C spin diffusion NMR

Journal of the American Chemical Society

Volumn 127, Issue 17, 2005, Pages 6402-6408

  Luo, Wenbin ^a   Yao, Xiaolan ^a,b   Hong, Mei ^a  

^a IOWA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF TEXAS SOUTHWESTERN MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIFFUSION; MEMBRANES; NUCLEAR MAGNETIC RESONANCE; PROTEINS; SPECTRUM ANALYSIS; STATISTICAL METHODS;

COLICIN; DIFFUSION SPECTRA; INTERHELICAL CONTACTS;

CRYSTAL STRUCTURE;

BACTERIAL TOXIN; CARBON 13; COLICIN;

ARTICLE; CARBON NUCLEAR MAGNETIC RESONANCE; CONFORMATIONAL TRANSITION; DIFFUSION; LIPID BILAYER; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN STRUCTURE;

COLICINS; ESCHERICHIA COLI; ION CHANNELS; MEMBRANE PROTEINS; MODELS, MOLECULAR; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, TERTIARY;

EID: 18244366077     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0433121     Document Type: Article

References (38)

1. Martin, R. W.; Zilm, K. W. J. Magn. Reson. 2003, 165, 162-174.
2. Pauli, J.; Baldus, M.; vanRossum, B.; Groot, H. d.; Oschkinat, H. ChemBioChem 2001, 2, 272-281.
3. McDermott, A. E.; Polenova, T.; Bockmann, A.; Zilm, K. W.; Paulsen, E. K.; Martin, R. W.; Montelione, G. T. J. Biomol. NMR 2000, 16, 209-219.
4. Hong, M. J. Biomol. NMR 1999, 15, 1-14.
5. Detken, A.; Hardy, E. H.; Ernst, M.; Kainosho, M.; Kawakami, T.; Aimoto, S.; Meier, B. H. J. Biomol. NMR 2001, 20, 203-221.
6. Jaroniec, C. P.; Filip, C.; Griffin, R. G. J. Am. Chem. Soc. 2002, 124, 10728-10742.
7. Rienstra, C. M.; Hohwy, M.; Mueller, L. J.; Jaroniec, C. P.; Reif, B.; Griffin, R. G. J. Am. Chem. Soc. 2002, 124, 11908-11922.
8. Antzutkin, O. N. In Solid-state NMR spectroscopy principles and applications; Duer, M. J., Ed.; Blackwell Sciences: Oxford, 2002; pp 280-390.
9. Castellani, F.; vanRossum, B.; Diehl, A.; Schubert, M.; Rehbein, K.; Oschkinat, H. Nature 2002, 420, 98-102,
10. Jaroniec, C. P.; MacPhee, C. E.; Bajaj, V. S.; McMahon, M. T.; Dobson, C. M.; Griffin, R. G. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 711-716.
11. Schmidt-Rohr, K.; Hong, M. J. Am. Chem. Soc. 2003, 125, 5648-5649.
12. Wi, S.; Sinha, N.; Hong, M. J. Am. Chem. Soc. 2004, 126, 12754-12755.
13. Cramer, W. A.; Heymann, J. B.; Schendel, S. L.; Deriy, B. N.; Cohen, F. S.; Elkins, P. A.; Stauffacher, C. V. Annu. Rev. Biophys. Biomol. Struct. 1995, 24, 611-641.
14. Wiener, M.; Freymann, D.; Ghosh, P.; Stroud, R. M. Nature 1997, 385, 461-464.
15. Huster, D.; Yao, X.; Jakes, K.; Hong, M. Biochim. Biophys. Acta 2002, 1561, 159-170.
16. Zakharov, S. D.; Lindeberg, M.; Griko, Y.; Salamon, Z.; Tollin, G.; Prendergast, F. G.; Cramer, W. A. Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 4282-4287.
17. Lindeberg, M.; Zakharov, S. D.; Cramer, W. A. J. Mol. Biol. 2000, 295, 679-692.
18. Lakey, J. H.; Baty, D.; Pattus, F. J. Mol. Biol. 1991, 218, 639-653.
19. Shin, Y.; Levinthal, C.; Levinthal, F.; Hubbell, W. L. Science 1993, 259, 960-963.
20. Massotte, D.; Yamamoto, M.; Scianimanico, S.; Sorokine, O.; Dorsselaer, A. v.; Nakatani, Y.; Ourisson, G.; Pattus, F. Biochemistry 1993, 32, 13787-13794.
21. van der Goot, F. G.; Gonzalex-Manas, J. M.; Lakey, J. H.; Pattus, F. Nature 1991, 354, 408-410.
22. Huster, D.; Yao, X.; Hong, M. J. Am. Chem. Soc. 2002, 124, 874-883.
23. Kim, Y.; Valentine, K.; Opella, S. J.; Schendel, S. L.; Cramer, W. A. Protein Sci. 1998, 7, 342-348.
24. Hong, M.; Jakes, K. J. Biomol. NMR 1999, 14, 71-74.
25. Hong, M. J. Magn. Reson. 1999, 139, 389-401.
26. Hope, M. J.; Bally, M. B.; Webb, G.; Cullis, P. R. Biochim. Biophys. Acta 1985, 812, 55-65.
27. Smith, P. K.; Krohn, R. I.; Hermanson, G. T.; Mallia, A. K.; Gartner, F. H.; Provenzano, M. D.; Fujimoto, E. K.; Goeke, N. M.; Olson, B. J.; Klenk, D. C. Anal. Biochem. 1985, 150, 76-85.
28. Bennett, A. E.; Rienstra, C. M.; Auger, M.; Lakshmi, K. V.; Griffin, R. G. J. Chem. Phys. 1995, 103, 6951-6958.
29. Raleigh, D. P.; Levitt, M. H.; Griffin, R. G. Chem. Phys. Lett. 1988, 146, 71-76.
30. Meier, B. H. Adv. Magn. Opt. Reson. 1994, 18, 1-115.
31. Bronniman, C. E.; Szeverenyi, N. M.; Maciel, O. E. J. Chem. Phys. 1983, 79, 3694-3700.
32. Huster, D.; Xiao, L.; Hong, M. Biochemistry 2001, 40, 7662-7674.
33. Castellani, F.; Rossum, B. J. v.; Diehl, A.; Rehbein, K.; Oschkinat, H. Biochemistry 2003, 42, 11476-11483.
34. Kumashiro, K. K.; Schmidt-Rote, K.; Murphy, O. J.; Ouellette, K. L.; Cramer, W. A.; Thompson, L. K. J. Am. Chem. Soc. 1998, 120, 5043-5051.
35. Parker, M. W.; Postma, J. P. M.; Pattus, F.; Tucker, A. D.; Tsernoglou, D. J. Mol. Biol. 1992, 224, 639-657.
36. Lange, A.; Luca, S.; Baldus, M. J. Am. Chem. Soc. 2002, 124, 9704-9705.
37. Lange, A.; Seidel, K.; Verdier, L.; Luca, S.; Baldus, M. J. Am. Chem. Soc. 2003, 125, 12640-12648.
38. Kienker, P. K.; Qiu, X.; Slatin, S. L.; Finkelstein, A.; Jakes, K. S. J. Membr. Biol. 1997, 157, 27-37.