Use of DNA repair enzymes in electrochemical detection of damage to DNA bases in vitro and in cells

Analytical Chemistry

Volumn 77, Issue 9, 2005, Pages 2920-2927

  Cahová Kuchaříková, Kateřina ^a   Fojta, Miroslav ^a   Mozga, Tomáš ^a   Palećek, Emil ^a  

^a INSTITUTE OF BIOPHYSICS   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

DNA REPAIR; ELECTROCHEMICAL DETECTION; SINGLE STRAND BREAKS;

BACTERIA; ELECTROCHEMISTRY; ELECTRODES; ENZYMES; ESCHERICHIA COLI;

DNA;

DEOXYRIBONUCLEASE (PYRIMIDINE DIMER); DNA BASE; EXODEOXYRIBONUCLEASE III; MERCURY; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; SINGLE STRANDED DNA;

APURINIC SITE; ARTICLE; CONTROLLED STUDY; DNA CLEAVAGE; DNA DAMAGE; DNA DEGRADATION; DNA REPAIR; DNA STRAND; DNA STRAND BREAKAGE; DNA SUPERCOILING; ELECTROCHEMICAL ANALYSIS; ELECTRODE; NONHUMAN; PHOTOCHEMISTRY; POTENTIOMETRY; SENSITIVITY AND SPECIFICITY; ULTRAVIOLET RADIATION;

DEOXYRIBONUCLEASE (PYRIMIDINE DIMER); DNA DAMAGE; DNA, BACTERIAL; DNA, SINGLE-STRANDED; DNA, SUPERHELICAL; ELECTROCHEMISTRY; ESCHERICHIA COLI; EXODEOXYRIBONUCLEASES; VIRAL PROTEINS;

EID: 18144425133     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac048423x     Document Type: Article

References (62)

1. Friedberg, E. C. Nature 2003, 421, 436-440.
2. Scharer, O. D. Angew. Chem., Int. Ed. 2003, 42, 2946-2974.
3. Collins, A.; Gedik, C.; Vaughan, N.; Wood, S.; White, A.; Dubois, J.; Rees, J. F.; Loft, S.; Moller, P.; Cadet, J.; Douki, T.; Ravanat, J. L.; Sauvaigo, S.; Faure, H.; Morel, I.; Morin, M.; Epe, B.; Phoa, N.; Hartwig, A.; Schwerdtle, T.; Dolara, P.; Giovannelli, L.; Lodovici, M.; Olinski, R.; Bialkowski, K.; Foksinski, M.; Gackowski, D.; Durackova, Z.; Hlincikova, L.; Korytar, P.; Sivonova, M.; Dusinska, M.; Mislanova, C.; Vina, J.; Moller, L.; Hofer, T.; Nygren, J.; Gremaud, E.; Herbert, K.; Lunec, J.; Wild, C.; Hardie, L.; Olliver, J.; Smith, E. Free Radical Biol. Med. 2003, 34, 1089-1099.
4. Collins, A. R.; Cadet, J.; Moller, L.; Poulsen, H. E.; Vina, J. Arch. Biochem. Biophys. 2004, 423, 57-65.
5. Guetens, G.; De Boeck, G., Highley, M.; van Oosterom, A. T.; de Bruijn, E. A. Crit. Rev. Clin. Lab. Sci. 2002, 39, 331-457.
6. England, T. G.; Jenner, A.; Aruoma, O. I.; Halliwell, B. Free Radical Res. 1998, 29, 321-330.
7. Bykov, V. J.; Kumar, R.; Forsti, A.; Hemminki, K. Carcinogenesis 1995, 16, 113-118.
8. Stiborova, M.; Rupertova, M.; Hodek, P.; Frei, E.; Schmeiser, H. H. Collect. Czech. Chem. Commun 2004, 69, 476-498.
9. Sun, X.; Nair, J.; Bartsch, H. Chem. Res. Toxicol. 2004, 17, 268-272.
10. Boublikova, P.; Vojtiskova, M.; Palecek, E. Anal. Lett. 1987, 20, 275-291.
11. Fojta, M.; Palecek, E. Anal. Chim. Acta 1997, 342, 1-12.
12. Fojta, M.; Kubicarova, T.; Palecek, E. Electroanalysis 1999, 11, 1005-1012.
13. Collins, A. R. Mol. Biotechnol. 2004, 26, 249-261.
14. Faust, F.; Kassie, F.; Knasmuller, S.; Boedecker, R. H.; Mann, M.; Mersch-Sundermann, V. Mutat. Res. Rev. Mutat. 2004, 566, 209-229.
15. Collins, A. R. Am. J. Clin. Nutr. 2005, 81, 261S-267S.
16. Olive, P. L.; Durand, R. E.; Raleigh, J. A.; Luo, C.; Aquino-Parsons, C. Br. J. Cancer 2000, 83, 1525-1531.
17. Pouget, J. P.; Douki, T.; Richard, M. J.; Cadet, J. Chem. Res. Toxicol. 2000, 13, 541-549.
18. Cadet, J.; D'Ham, C.; Douki, T.; Pouget, J. P.; Ravanat, J. L.; Sauvaigo, S. Free Radical Res. 1998, 29, 541-550.
19. Wang, H. L.; Lu, M. L.; Mei, N.; Lee, J.; Weinfeld, M.; Le, X. C. Anal. Chim. Acta 2003, 500, 13-20.
20. Peccia, J.; Hernandez, M. Appl. Environ. Microb. 2002, 68, 2542-2549.
21. Cooke, M. S.; Podmore, I. D.; Mistry, N.; Evans, M. D.; Herbert, K. E.; Griffiths, H. R.; Lunec, J. J. Immunol. Methods 2003, 280, 125-133.
22. Kumar, A.; Tyagi, M. B.; Jha, P. N. Biochem. Biophys. Res. Commun. 2004, 318, 1025-1030.
23. Palecek, E.; Fojta, M.; Jelen, F.; Vetterl, V. In The Encyclopedia of Electrochemistry; Bard, A. J., Stratsmann, M., Eds.; Wiley-VCH: Weinheim, 2002; Vol. 9 (Bioelectrochemistry), pp 365-429.
24. Fojta, M. Electroanalysis 2002, 14, 1449-1463.
25. Fojta, M. Collect. Czech. Chem. Commun. 2004, 69, 715-747.
26. Erdem, A.; Ozsoz, M. Electroanalysis 2002, 14, 965-974.
27. Palecek, E.; Fojta, M. Anal. Chem. 2001, 73, 74A-83A.
28. Mascini, M. Pure Appl. Chem. 2001, 73, 23-30.
29. Fojta, M.; Kubicarova, T.; Palecek, E. Biosens. Bioelectron. 2000, 15, 107-115.
30. Kubicarova, T.; Fojta, M.; Vidic, J.; Havran, L.; Palecek, E. Electroanalysis 2000, 12, 1422-1425.
31. Fadrna, R.; Cahova-Kucharikova, K.; Havran, L.; Yosypchuk, B.; Fojta, M. Electroanalysis 2005, 17, 452-459.
32. Kucharikova, K.; Novotny, L.; Yosypchuk, B.; Fojta, M. Electroanalysis 2004, 16, 410-414.
33. Langmaier, J.; Samec, Z.; Samcova, E. Electroanalysis 2003, 15, 1555-1560.
34. Brett, A. M. O.; Piedade, J. A. P.; Serrano, S. H. P. Electroanalysis 2000, 12, 969-973.
35. Mascini, M.; Palchetti, I.; Marrazza, G. Fresenius J. Anal. Chem. 2001, 369, 15-22.
36. Jelen, F.; Tomschik, M.; Palecek, E. J. Electroanal. Chem. 1997, 423, 141-148.
37. Marin, D.; Perez, P.; Teijeiro, C.; Palecek, E. Biophys. Chem. 1998, 75, 87-95.
38. Wang, J.; Chicharro, M.; Rivas, G.; Cai, X. H.; Dontha, N.; Farias, P. A. M.; Shiraishi, H. Anal. Chem. 1996, 68, 2251-2254.
39. Wang, J.; Rivas, G.; Ozsos, M.; Grant, D. H.; Cai, X. H.; Parrado, C. Anal. Chem. 1997, 69, 1457-1460.
40. Vorlickova, M.; Palecek, E. Int. J. Radiat. Biol. 1974, 26, 363-372.
41. Thorp, H. H. In Long-Range Charge Transfer in DNA; Topics in Current Chemistry 237; Springer-Verlag: Heidelberg, 2004; pp 159-181.
42. Popovich, N.; Thorp, H. Interface 2002, 11, 30-34.
43. Rusling, J. F. Biosens. Bioelectron. 2004, 20, 1022-1028.
44. Yang, J.; Zhang, Z.; Rusling, J. F. Electroanalysis 2002, 14, 1494-1500.
45. Wang, B. Q.; Rusling, J. F. Anal. Chem. 2003, 75, 4229-4235.
46. Cai, X.; Rivas, G.; Farias, P. A. M.; Shiraishi, H.; Wang, J.; Fojta, M.; Palecek, E. Bioelectrochem. Bioenerg. 1996, 40, 41-47.
47. Fojta, M.; Havran, L.; Kizek, R.; Billova, S. Talanta 2002, 56, 867-874.
48. Schrock, R. D., 3rd; Lloyd, R. S. J. Biol. Chem. 1993, 268, 880-886.
49. Blackburn, M. G.; Gait, M. J. Nucleic Acids in Chemistry and Biology; IRL Press: New York, 1990.
50. Rogers, S. G.; Weiss, B. In Methods in Enzymology; Grosmann, L., Moldave, K., Eds.; Academic Press: New York, 1980; Vol. 65, pp 201-211.
51. Boturyn, D.; Constant, J. F.; Defrancq, E.; Lhomme, J.; Barbin, A.; Wild, C. P. Chem. Res. Toxicol. 1999, 12, 476-482.
52. Yosypchuk, B.; Heyrovsky, M.; Palecek, E.; Novotny, L. Electroanalysis 2002, 14, 1488-1493.
53. Yosypchuk, B.; Novotny, L. Electroanalysis 2002, 14, 1733-1738.
54. Helbock, H. J.; Beckman, K. B.; Shigenaga, M. K.; Walter, P. B.; Woodall, A. A.; Yeo, H. C.; Ames, B. N. Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 288-293.
55. Chen, B. X.; Kubo, K.; Ide, H.; Erlanger, B. F.; Wallace, S. S.; Kow, Y. W. Mutat. Res. 1992, 273, 253-261.
56. Ide, H.; Akamatsu, K.; Kimura, Y.; Michiue, K.; Makino, K.; Asaeda, A.; Takamori, Y.; Kubo, K. Biochemistry 1993, 32, 8276-8283.
57. Podmore, I. D.; Cooke, M. S.; Herbert, K. E.; Lunec, J. Photochem. Photobiol. 1996, 64, 310-315.
58. Freeman, S. E.; Blackett, A. D.; Monteleone, D. C.; Setlow, R. B.; Sutherland, B. M.; Sutherland, J. C. Anal. Biochem. 1986, 158, 119-129.
59. Drummond, T. G.; Hill, M. G.; Barton, J. K. Nat. Biotechnol. 2003, 21, 1192-1199.
60. Gooding, J. J. Electroanalysis 2002, 14, 1149-1156.
61. Wang, J. Anal. Chim. Acta 2002, 469, 63-71.
62. Labuda, J.; Buckova, M.; Heilerova, L.; Silhar, S.; Stepanek, I. Anal. Bioanal. Chem. 2003, 376, 168-173.