Intron retention identifies a malaria vector within the Anopheles (Nyssorhynchus) albitaris complex (Diptera: Culicidae)

Molecular Phylogenetics and Evolution

Volumn 35, Issue 3, 2005, Pages 719-724

  Merritt, T J S ^a,b   Young, C R ^a,c,d   Vogt, R G ^a   Wilkerson, R C ^a,e   Quattro, J M ^a  

^a UNIVERSITY OF SOUTH CAROLINA   (United States)

^b STONY BROOK UNIVERSITY   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d MONTEREY BAY AQUARIUM RESEARCH INSTITUTE   (United States)

^e WALTER REED ARMY INSTITUTE OF RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ANOPHELES; ARTICLE; BAYES THEOREM; BIOLOGICAL MODEL; BRAZIL; CLASSIFICATION; COMPARATIVE STUDY; DISEASE CARRIER; DNA SEQUENCE; FEMALE; GENE; GENETICS; INTRON; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLASMODIUM FALCIPARUM; SPECIES DIFFERENCE; STATISTICAL MODEL;

ANIMALS; ANOPHELES; BASE SEQUENCE; BAYES THEOREM; BRAZIL; FEMALE; GENES, INSECT; INSECT VECTORS; INTRONS; LIKELIHOOD FUNCTIONS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLASMODIUM FALCIPARUM; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

CULICIDAE; DIPTERA; NYSSORHYNCHUS;

EID: 18144389861     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ympev.2005.03.009     Document Type: Article

References (18)

1. H. Akaike A new look at the statistical model identification IEEE Trans. Autom. Contrib. 19 1974 716 723
2. N.J. Besansky, and G.T. Fahey Utility of the white gene in estimating phylogenetic relationships among mosquitoes (Diptera: Culicidae) Mol. Biol. Evol. 14 1997 442 454
3. J.E. Conn, R.C. Wilkerson, M.N. Segura, R.T. De Souza, C.D. Schlichting, R.A. Wirtz, and M.N. Povoa Emergence of a new neotropical malaria vector facilitated by human migration and changes in land use Am. J. Trop. Med. Hyg. 66 2002 18 22
4. J. Felsenstein Evolutionary trees from DNA sequences: a maximum likelihood approach J. Mol. Evol. 17 1981 368 376
5. J.P. Huelsenbeck, and F. Ronquist Mrbayes: Bayesian inference of phylogenetic trees Bioinformatics 17 8 2001 754 755
6. J. Krywinski, and N.J. Besansky Frequent intron loss in the white gene: a cautionary tale for phylogeneticists Mol. Biol. Evol. 19 2002 362 366
7. J. Krywinski, R.C. Wilkerson, and N.J. Besansky Toward understanding Anophelinae (Diptera, Culicidae) phylogeny: insights from nuclear single-copy genes and the weight of evidence Syst. Biol. 50 2001 540 556
8. K.J. Linthicum A revision of the Argyritarsis section of the subgenus Nyssorhynchus of Anopheles Mosq. Syst. 20 1988 98 271
9. D. Posada, and K.A. Crandall Selecting the best fit model of nucleotide substitution Syst. Biol. 50 2001 580 601
10. J. Rozas, J.C. Sanchez-Delbarrio, X. Messeguer, and R. Rozas Dnasp, DNA polymorphism analyses by the coalescent and other methods Bioinformatics 19 2003 2496 2497
11. A. Rzhetsky, and M. Nei Tests of the applicability of several substitution models for DNA sequence data Mol. Biol. Evol. 12 1995 131 151
12. H. Shimodaira, and M. Hasegawa Multiple comparisons of log-likelihoods with applications to phylogenetic inference Mol. Biol. Evol. 16 1999 1114 1116
13. Swofford, D.L., 1998. PAUP*. Phylogenetic analysis using parsimony (* and other methods). Sunderland, MA, Sinauer
14. S. Tavaré Some probabilistic and statistical problems on the analysis of DNA sequences Lect. Math. Life Sci. 17 1986 57 86
15. J.D. Thompson, D.G. Higgins, and T.J. Gibson Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice Nucleic Acids Res. 22 22 1994 4673 4680
16. R.C. Wilkerson, T.V. Gaffigan, and J.B. Lima Identification of species related to Anopheles (Nyssorhynchus) albitarsis by random amplified polymorphic DNA-polymerase chain reaction (Diptera: Culicidae) Mem. Inst. Osw. Cruz 90 1995 721 732
17. R.C. Wilkerson, T.J. Parsons, T.A. Klein, T.V. Gaffigan, E. Bergo, and J. Consolim Diagnosis by random amplified polymorphic DNA polymerase chain reaction of four cryptic species related to Anopheles (Nyssorhynchus) albitarsis (Diptera: Culicidae) from Paraguay, Argentina, and Brazil J. Med. Entomol 32 1995 697 704
18. Z. Yang Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods J. Mol. Evol. 39 1994 306 314