메뉴 건너뛰기




Volumn 33, Issue 6, 2005, Pages 1825-1833

Torsional restraint: A new twist on frameshifting pseudoknots

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; RIBONUCLEASE;

EID: 17844384225     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gki329     Document Type: Article
Times cited : (74)

References (30)
  • 1
    • 0029896020 scopus 로고    scopus 로고
    • Recoding: Dynamic reprogramming of translation
    • Gesteland,R.F. and Atkins,J.F. (1996) Recoding: Dynamic reprogramming of translation. Annu. Rev. Biochem., 65, 741-768.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 741-768
    • Gesteland, R.F.1    Atkins, J.F.2
  • 2
    • 0023866603 scopus 로고
    • A pseudoknotted RNA oligonucleotide
    • Puglisi,J.D., Wyatt,J.R. and Tinoco,I.,Jr (1988) A pseudoknotted RNA oligonucleotide. Nature, 331, 283-286.
    • (1988) Nature , vol.331 , pp. 283-286
    • Puglisi, J.D.1    Wyatt, J.R.2    Tinoco Jr., I.3
  • 3
    • 0034724565 scopus 로고    scopus 로고
    • Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting
    • Giedroc,D.P., Theimer,C.A. and Nixon,P.L. (2000) Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting. J. Mol. Biol., 298, 167-185.
    • (2000) J. Mol. Biol. , vol.298 , pp. 167-185
    • Giedroc, D.P.1    Theimer, C.A.2    Nixon, P.L.3
  • 5
    • 0029091681 scopus 로고
    • Ribosomal frameshifting on viral RNAs
    • Brierley,I. (1995) Ribosomal frameshifting on viral RNAs. J. Gen. Virol., 76, 1885-1892.
    • (1995) J. Gen. Virol. , vol.76 , pp. 1885-1892
    • Brierley, I.1
  • 7
    • 0036711292 scopus 로고    scopus 로고
    • An "integrated model" of programmed ribosomal frameshifting and post-transcriptional surveillance
    • Harger,J.W., Meskauskas,A. and Dinman,J.D. (2002) An "integrated model" of programmed ribosomal frameshifting and post-transcriptional surveillance. Trends Biochem. Sci., 27, 448-454.
    • (2002) Trends Biochem. Sci. , vol.27 , pp. 448-454
    • Harger, J.W.1    Meskauskas, A.2    Dinman, J.D.3
  • 8
    • 0035200990 scopus 로고    scopus 로고
    • Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency
    • Kontos,H., Napthine,S. and Brierley,I. (2001) Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency. Mol. Cell. Biol., 21, 8657-8670.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 8657-8670
    • Kontos, H.1    Napthine, S.2    Brierley, I.3
  • 9
    • 0024277965 scopus 로고
    • Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region
    • Jacks,T., Madhani,H.D., Masiraz,F.R. and Varmus,H.E. (1988) Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region. Cell, 55, 447-458.
    • (1988) Cell , vol.55 , pp. 447-458
    • Jacks, T.1    Madhani, H.D.2    Masiraz, F.R.3    Varmus, H.E.4
  • 10
    • 0023870815 scopus 로고
    • Characterization of ribosomal frameshifting in HIV-1 gag-pol expression
    • Jacks,T., Power,M.D., Masiarz,F.R., Luciw,PA., Barr,P.J. and Varmus,H.E. (1988) Characterization of ribosomal frameshifting in HIV-1 gag-pol expression. Nature, 331, 280-283.
    • (1988) Nature , vol.331 , pp. 280-283
    • Jacks, T.1    Power, M.D.2    Masiarz, F.R.3    Luciw, P.A.4    Barr, P.J.5    Varmus, H.E.6
  • 11
    • 0029096626 scopus 로고
    • Ribosomal frameshifting in yeast viruses
    • Dinman,J.D. (1995) Ribosomal frameshifting in yeast viruses. Yeast, 11, 1115-1127.
    • (1995) Yeast , vol.11 , pp. 1115-1127
    • Dinman, J.D.1
  • 12
    • 11844292767 scopus 로고    scopus 로고
    • mRNA helicase activity of the ribosome
    • Takyar,S., Hickerson,R.P. and Noller,H.F. (2005) mRNA helicase activity of the ribosome. Cell, 120, 49-58.
    • (2005) Cell , vol.120 , pp. 49-58
    • Takyar, S.1    Hickerson, R.P.2    Noller, H.F.3
  • 14
    • 0026533645 scopus 로고
    • Identification and analysis of the gag-pol ribosomal frameshift site of feline immunodeficiency virus
    • Morikawa,S. and Bishop,D.H.L. (1992) Identification and analysis of the gag-pol ribosomal frameshift site of feline immunodeficiency virus. Virology, 186, 389-397.
    • (1992) Virology , vol.186 , pp. 389-397
    • Morikawa, S.1    Bishop, D.H.L.2
  • 15
    • 0025769767 scopus 로고
    • Mutational analysis of the RNA pseudoknot component of a coronavirus ribosomal frameshifting signal
    • Brierley,I.A., Rolley,N.J., Jenner,A.J. and Inglis,S.C. (1991) Mutational analysis of the RNA pseudoknot component of a coronavirus ribosomal frameshifting signal. J. Mol. Biol., 220, 889-902.
    • (1991) J. Mol. Biol. , vol.220 , pp. 889-902
    • Brierley, I.A.1    Rolley, N.J.2    Jenner, A.J.3    Inglis, S.C.4
  • 16
    • 0026733573 scopus 로고
    • Ribosomal movement impeded at a pseudoknot required for ribosomal frameshifting
    • Tu,C., Tzeng,T.-H. and Bruenn,J.A. (1992) Ribosomal movement impeded at a pseudoknot required for ribosomal frameshifting. Proc. Natl Acad. Sci. USA, 89, 8636-8640.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 8636-8640
    • Tu, C.1    Tzeng, T.-H.2    Bruenn, J.A.3
  • 17
    • 0033452721 scopus 로고    scopus 로고
    • Specific mutations in a viral RNA pseudoknot drastically change ribosomal frameshifting efficiency
    • Kim,Y.G., Su,L., Maas,S., O'Neill,A. and Rich,A. (1999) Specific mutations in a viral RNA pseudoknot drastically change ribosomal frameshifting efficiency. Proc. Natl Acad. Sci. USA, 96, 14234-14239.
    • (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 14234-14239
    • Kim, Y.G.1    Su, L.2    Maas, S.3    O'Neill, A.4    Rich, A.5
  • 18
    • 0026643735 scopus 로고
    • Ribosomal frameshifting efficiency and gag/gag-pol ratio are critical for yeast M, double-stranded RNA virus propagation
    • Dinman,J.D. and Wickner,R.B. (1992) Ribosomal frameshifting efficiency and gag/gag-pol ratio are critical for yeast M, double-stranded RNA virus propagation. J. Virol., 66, 3669-3676.
    • (1992) J. Virol. , vol.66 , pp. 3669-3676
    • Dinman, J.D.1    Wickner, R.B.2
  • 20
    • 0033532080 scopus 로고    scopus 로고
    • The role of RNA pseudoknot stem 1 length in the promotion of efficient -1 ribosomal frameshifting
    • Napthine,S., Liphardt,J., Bloys,A., Routledge,S. and Brierley,I. (1999) The role of RNA pseudoknot stem 1 length in the promotion of efficient -1 ribosomal frameshifting. J. Mol. Biol., 288, 305-320.
    • (1999) J. Mol. Biol. , vol.288 , pp. 305-320
    • Napthine, S.1    Liphardt, J.2    Bloys, A.3    Routledge, S.4    Brierley, I.5
  • 21
    • 0028307694 scopus 로고
    • Identification and analysis of the pseudoknot-containing gag-pro ribosomal frameshift signal of simian retrovirus-1
    • ten Dam,E., Brierley,I., Inglis,S. and Pleij,C. (1994) Identification and analysis of the pseudoknot-containing gag-pro ribosomal frameshift signal of simian retrovirus-1. Nucleic Acids Res., 22, 2304-2310.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 2304-2310
    • ten Dam, E.1    Brierley, I.2    Inglis, S.3    Pleij, C.4
  • 23
    • 0026098002 scopus 로고
    • A -1 ribosomal frameshift in a double-stranded RNA virus forms a gag-pol fusion protein
    • Dinman,J.D., Icho,T. and Wickner,R.B. (1991) A -1 ribosomal frameshift in a double-stranded RNA virus forms a gag-pol fusion protein. Proc. Natl Acad. Sci. USA, 88, 174-178.
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 174-178
    • Dinman, J.D.1    Icho, T.2    Wickner, R.B.3
  • 24
    • 0026038913 scopus 로고
    • The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency
    • Gallie,D.R. (1991) The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency. Genes Dev., 5, 2108-2116.
    • (1991) Genes Dev. , vol.5 , pp. 2108-2116
    • Gallie, D.R.1
  • 25
    • 0037413818 scopus 로고    scopus 로고
    • Conversion of 48S translation preinitiation complexes into 80S initiation complexes as revealed by toeprinting
    • Dmitriev,S.E., Pisarev,A.V., Rubtsova,M.P., Dunaevsky,Y.E. and Shatsky,I.N. (2003) Conversion of 48S translation preinitiation complexes into 80S initiation complexes as revealed by toeprinting. FEBS Lett., 533, 99-104.
    • (2003) FEBS Lett. , vol.533 , pp. 99-104
    • Dmitriev, S.E.1    Pisarev, A.V.2    Rubtsova, M.P.3    Dunaevsky, Y.E.4    Shatsky, I.N.5
  • 27
    • 0033532081 scopus 로고    scopus 로고
    • Evidence for an RNA pseudoknot loop helix interaction essential for efficient -1 ribosomal frameshifting
    • Liphardt,J., Napthine,S., Kontos,H. and Brierley,I. (1999) Evidence for an RNA pseudoknot loop helix interaction essential for efficient -1 ribosomal frameshifting. J. Mol. Biol., 288, 321-335.
    • (1999) J. Mol. Biol. , vol.288 , pp. 321-335
    • Liphardt, J.1    Napthine, S.2    Kontos, H.3    Brierley, I.4
  • 28
    • 0037183520 scopus 로고    scopus 로고
    • Thermodynamic analysis of conserved loop-stem interactions in P1-P2 frameshifting RNA pseudoknots from plant Luteoviridae
    • Nixon,P.L., Cornish,P.V., Suram,S.V. and Giedroc,D.P. (2002) Thermodynamic analysis of conserved loop-stem interactions in P1-P2 frameshifting RNA pseudoknots from plant Luteoviridae. Biochemistry, 41, 10665-10674.
    • (2002) Biochemistry , vol.41 , pp. 10665-10674
    • Nixon, P.L.1    Cornish, P.V.2    Suram, S.V.3    Giedroc, D.P.4
  • 29
    • 7044221967 scopus 로고    scopus 로고
    • Novel application of sRNA: Stimulation of ribosomal frameshifting
    • Olsthoorn,R.C., Laurs,M., Sohet,F., Hilbers,C.W., Heus,H.A. and Pleij,C.W. (2004) Novel application of sRNA: Stimulation of ribosomal frameshifting. RNA, 10, 1702-1703.
    • (2004) RNA , vol.10 , pp. 1702-1703
    • Olsthoorn, R.C.1    Laurs, M.2    Sohet, F.3    Hilbers, C.W.4    Heus, H.A.5    Pleij, C.W.6
  • 30
    • 4644308292 scopus 로고    scopus 로고
    • Efficient stimulation of site-specific ribosome frameshifting by antisense oligonucleotides
    • Howard,M.T., Gesteland,R.F. and Atkins,J.F. (2004) Efficient stimulation of site-specific ribosome frameshifting by antisense oligonucleotides. RNA, 10, 1653-1661.
    • (2004) RNA , vol.10 , pp. 1653-1661
    • Howard, M.T.1    Gesteland, R.F.2    Atkins, J.F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.