-
1
-
-
0038203926
-
Faster exact algorithms for hard problems: A parameterized point of view
-
J. Alber, J. Gramm, and R. Niedermeier Faster exact algorithms for hard problems a parameterized point of view Discrete Math. 229 2001 3 27
-
(2001)
Discrete Math.
, vol.229
, pp. 3-27
-
-
Alber, J.1
Gramm, J.2
Niedermeier, R.3
-
2
-
-
0006683426
-
Maximum agreement subtree in a set of evolutionary trees: Metrics and efficient algorithms
-
A. Amir, and D. Keselman Maximum agreement subtree in a set of evolutionary trees Metrics and efficient algorithms SIAM J. Comput. 26 6 1997 1656 1669
-
(1997)
SIAM J. Comput.
, vol.26
, Issue.6
, pp. 1656-1669
-
-
Amir, A.1
Keselman, D.2
-
3
-
-
0037566107
-
Chain letters and evolutionary histories
-
C.H. Bennett, M. Li, and B. Ma Chain letters and evolutionary histories Sci. Amer. 288 6 2003 76 81
-
(2003)
Sci. Amer.
, vol.288
, Issue.6
, pp. 76-81
-
-
Bennett, C.H.1
Li, M.2
Ma, B.3
-
4
-
-
0342298647
-
Constructing evolutionary trees in the presence of polymorphic characters
-
M. Bonet, C. Phillips, T. Warnow, and S. Yooseph Constructing evolutionary trees in the presence of polymorphic characters SIAM J. Comput. 29 1 1999 103 131
-
(1999)
SIAM J. Comput.
, vol.29
, Issue.1
, pp. 103-131
-
-
Bonet, M.1
Phillips, C.2
Warnow, T.3
Yooseph, S.4
-
5
-
-
0004189672
-
-
Ph.D. Thesis, University of Canterbury, Christchurch, New Zealand
-
D. Bryant, Building trees, hunting for trees, and comparing trees: theory and methods in phylogenetic analysis, Ph.D. Thesis, University of Canterbury, Christchurch, New Zealand, 1997.
-
(1997)
Building Trees, Hunting for Trees, and Comparing Trees: Theory and Methods in Phylogenetic Analysis
-
-
Bryant, D.1
-
6
-
-
17744386287
-
-
Canterbury Tales Project, De Montfort University, Harvard University, University of Leeds, National Library of Wales, Keio University, Brigham Young University, Virginia Polytechnic Institute and State University (Virginia Tech), University of Münster, and New York University, Website: http://www.cta.dmu.ac.uk/projects/ctp/.
-
-
-
-
7
-
-
0035189546
-
An O(n log n) algorithm for the maximum agreement subtree problem for binary trees
-
R. Cole, M. Farach-Colton, R. Hariharan, T. Przytycka, and M. Thorup An O (n log n) algorithm for the maximum agreement subtree problem for binary trees SIAM J. Comput. 30 5 2000 1385 1404
-
(2000)
SIAM J. Comput.
, vol.30
, Issue.5
, pp. 1385-1404
-
-
Cole, R.1
Farach-Colton, M.2
Hariharan, R.3
Przytycka, T.4
Thorup, M.5
-
11
-
-
0001052107
-
Sparse dynamic programming for evolutionary-tree comparison
-
M. Farach, and M. Thorup Sparse dynamic programming for evolutionary-tree comparison SIAM J. Comput. 26 1 1997 210 230
-
(1997)
SIAM J. Comput.
, vol.26
, Issue.1
, pp. 210-230
-
-
Farach, M.1
Thorup, M.2
-
14
-
-
0043045976
-
On the complexity of constructing evolutionary trees
-
L. Ga̧sieniec, J. Jansson, A. Lingas, and A. Östlin On the complexity of constructing evolutionary trees J. Combin. Optim. 3 2-3 1999 183 197
-
(1999)
J. Combin. Optim.
, vol.3
, Issue.2-3
, pp. 183-197
-
-
Ga̧sieniec, L.1
Jansson, J.2
Lingas, A.3
Östlin, A.4
-
15
-
-
84960341535
-
Efficient reconstruction of phylogenetic networks with constrained recombination
-
D. Gusfield, S. Eddhu, C. Langley, Efficient reconstruction of phylogenetic networks with constrained recombination, in: Proc. Comput. Systems Bioinformatics Conf. (CSB2003), 2003, pp. 363-374.
-
(2003)
Proc. Comput. Systems Bioinformatics Conf. (CSB2003)
, pp. 363-374
-
-
Gusfield, D.1
Eddhu, S.2
Langley, C.3
-
16
-
-
0025299784
-
Reconstructing evolution of sequences subject to recombination using parsimony
-
J. Hein Reconstructing evolution of sequences subject to recombination using parsimony Math. Biosci. 98 2 1990 185 200
-
(1990)
Math. Biosci.
, vol.98
, Issue.2
, pp. 185-200
-
-
Hein, J.1
-
18
-
-
35048872662
-
Phylogenetic super-networks from partial trees
-
D.H. Huson, T. Dezulian, T. Klöpper, M. Steel, Phylogenetic super-networks from partial trees, in: Proc. Fourth Workshop on Algorithms in Bioinformatics (WABI 2004), 2004, pp. 388-399.
-
(2004)
Proc. Fourth Workshop on Algorithms in Bioinformatics (WABI 2004)
, pp. 388-399
-
-
Huson, D.H.1
Dezulian, T.2
Klöpper, T.3
Steel, M.4
-
20
-
-
0032318537
-
Tree contractions and evolutionary trees
-
M.-Y. Kao Tree contractions and evolutionary trees SIAM J. Comput. 27 6 1998 1592 1616
-
(1998)
SIAM J. Comput.
, vol.27
, Issue.6
, pp. 1592-1616
-
-
Kao, M.-Y.1
-
21
-
-
0347752674
-
An even faster and more unifying algorithm for comparing trees via unbalanced bipartite matchings
-
M.-Y. Kao, T.-W. Lam, W.-K. Sung, and H.-F. Ting An even faster and more unifying algorithm for comparing trees via unbalanced bipartite matchings J. Algorithms 40 2 2001 212 233
-
(2001)
J. Algorithms
, vol.40
, Issue.2
, pp. 212-233
-
-
Kao, M.-Y.1
Lam, T.-W.2
Sung, W.-K.3
Ting, H.-F.4
-
22
-
-
0003421005
-
-
Sinauer Associates, Inc. Sunderland
-
W.-H. Li Molecular Evolution 1997 Sinauer Associates, Inc. Sunderland
-
(1997)
Molecular Evolution
-
-
Li, W.-H.1
-
23
-
-
33745514204
-
Network (reticulate) evolution: Biology, models, and algorithms
-
C.R. Linder, B.M.E. Moret, L. Nakhleh, T. Warnow, Network (reticulate) evolution: biology, models, and algorithms, Tutorial Presented at the 9th Pacific Symposium on Biocomputing (PSB 2004), 2004.
-
(2004)
9th Pacific Symposium on Biocomputing (PSB 2004)
-
-
Linder, C.R.1
Moret, B.M.E.2
Nakhleh, L.3
Warnow, T.4
-
24
-
-
0347739869
-
Alignment of shared forests for bilingual corpora
-
A. Meyers, R. Yangarber, R. Grishman, Alignment of shared forests for bilingual corpora, in: Proc. 16th Internat. Conf. on Computational Linguistics (COLING-96), 1996, pp. 460-465.
-
(1996)
Proc. 16th Internat. Conf. on Computational Linguistics (COLING-96)
, pp. 460-465
-
-
Meyers, A.1
Yangarber, R.2
Grishman, R.3
-
25
-
-
0042629743
-
Towards the development of computational tools for evaluating phylogenetic reconstruction methods
-
L. Nakhleh, J. Sun, T. Warnow, C.R. Linder, B.M.E. Moret, A. Tholse, Towards the development of computational tools for evaluating phylogenetic reconstruction methods, in: Proc. Eighth Pacific Symp. on Biocomputing (PSB 2003), 2003, pp. 315-326.
-
(2003)
Proc. Eighth Pacific Symp. on Biocomputing (PSB 2003)
, pp. 315-326
-
-
Nakhleh, L.1
Sun, J.2
Warnow, T.3
Linder, C.R.4
Moret, B.M.E.5
Tholse, A.6
-
26
-
-
2442436724
-
Reconstructing reticulate evolution in species - Theory and practice
-
L. Nakhleh, T. Warnow, C.R. Linder, Reconstructing reticulate evolution in species - theory and practice, in: Proc. Eighth Ann. Internat. Conf. on Research in Comput. Molecular Biology (RECOMB 2004), 2004, pp. 337-346.
-
(2004)
Proc. Eighth Ann. Internat. Conf. on Research in Comput. Molecular Biology (RECOMB 2004)
, pp. 337-346
-
-
Nakhleh, L.1
Warnow, T.2
Linder, C.R.3
-
27
-
-
0035139147
-
Intraspecific gene genealogies: Trees grafting into networks
-
D. Posada, and K.A. Crandall Intraspecific gene genealogies trees grafting into networks Trends Ecol. Evol. 16 1 2001 37 45
-
(2001)
Trends Ecol. Evol.
, vol.16
, Issue.1
, pp. 37-45
-
-
Posada, D.1
Crandall, K.A.2
-
29
-
-
0027912455
-
Kaikoura tree theorems: Computing the maximum agreement subtree
-
M. Steel, and T. Warnow Kaikoura tree theorems computing the maximum agreement subtree Inform. Process. Lett. 48 1993 77 82
-
(1993)
Inform. Process. Lett.
, vol.48
, pp. 77-82
-
-
Steel, M.1
Warnow, T.2
-
30
-
-
0034913468
-
Perfect phylogenetic networks with recombination
-
L. Wang, K. Zhang, and L. Zhang Perfect phylogenetic networks with recombination J. Comput. Biol. 8 1 2001 69 78
-
(2001)
J. Comput. Biol.
, vol.8
, Issue.1
, pp. 69-78
-
-
Wang, L.1
Zhang, K.2
Zhang, L.3
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