메뉴 건너뛰기




Volumn 3, Issue 2-3, 1999, Pages 183-197

On the Complexity of Constructing Evolutionary Trees

Author keywords

Algorithm; Consensus tree; Evolutionary tree; Homeomorphism; Time complexity

Indexed keywords


EID: 0043045976     PISSN: 13826905     EISSN: None     Source Type: Journal    
DOI: 10.1023/a:1009833626004     Document Type: Article
Times cited : (51)

References (20)
  • 1
    • 0001567207 scopus 로고
    • Inferring a tree from lowest common ancestors with an application to the optimization of relational expressions
    • A.V. Aho, Y. Sagiv, T.G. Szymanski, and J.D. Ullman, "Inferring a tree from lowest common ancestors with an application to the optimization of relational expressions," SIAM Journal of Computing, vol. 10, no. 3, pp. 405-421, 1981.
    • (1981) SIAM Journal of Computing , vol.10 , Issue.3 , pp. 405-421
    • Aho, A.V.1    Sagiv, Y.2    Szymanski, T.G.3    Ullman, J.D.4
  • 2
    • 84947724965 scopus 로고
    • Computing the agreement of trees with bounded degrees
    • M. Farach, T. Przytycka, and M. Thorup, "Computing the agreement of trees with bounded degrees," in Proc. of the 3rd ESA, 1995, pp. 381-393.
    • (1995) Proc. of the 3rd ESA , pp. 381-393
    • Farach, M.1    Przytycka, T.2    Thorup, M.3
  • 4
    • 0041563636 scopus 로고
    • Optimal evolutionary tree comparison by sparse dynamic programming
    • M. Farach and M. Thorup, "Optimal evolutionary tree comparison by sparse dynamic programming," in Proc. of the 35th FOCS, 1994b, pp. 770-779.
    • (1994) Proc. of the 35th FOCS , pp. 770-779
    • Farach, M.1    Thorup, M.2
  • 7
    • 0029712043 scopus 로고    scopus 로고
    • Testing of the long code and hardness for clique
    • J. Håstad, "Testing of the long code and hardness for clique," in Proc. of the 28th ACM STOC, 1996, pp. 11-19.
    • (1996) Proc. of the 28th ACM STOC , pp. 11-19
    • Håstad, J.1
  • 9
    • 85002013940 scopus 로고    scopus 로고
    • Constructing a tree from homeomorphic subtrees, with applications to computational biology
    • M.R. Henzinger, V. King, and T. Warnow, "Constructing a tree from homeomorphic subtrees, with applications to computational biology," in Proc. of the 7th ACM-SIAM SODA, 1996, pp. 333-340.
    • (1996) Proc. of the 7th ACM-SIAM SODA , pp. 333-340
    • Henzinger, M.R.1    King, V.2    Warnow, T.3
  • 11
    • 0002980001 scopus 로고
    • On the size of systems of sets every t of which have an SDR, with an application to the worst-case ratio of heuristics for packing problems
    • C.A.J. Hurkens and A. Schrijver, "On the size of systems of sets every t of which have an SDR, with an application to the worst-case ratio of heuristics for packing problems," SIAM Journal of Discrete Mathematics, vol. 2, no. 1, pp. 68-72, 1989.
    • (1989) SIAM Journal of Discrete Mathematics , vol.2 , Issue.1 , pp. 68-72
    • Hurkens, C.A.J.1    Schrijver, A.2
  • 12
    • 0016349356 scopus 로고
    • Approximation algorithms for combinatorial problems
    • D.S. Johnson, "Approximation algorithms for combinatorial problems," Journal of Computer and System Sciences, vol. 9, pp. 256-278, 1974.
    • (1974) Journal of Computer and System Sciences , vol.9 , pp. 256-278
    • Johnson, D.S.1
  • 15
    • 0029711242 scopus 로고    scopus 로고
    • Minimum cuts in near-linear time
    • D.R. Karger, "Minimum cuts in near-linear time," in Proc. of the 28th ACM STOC, 1996, pp. 56-63.
    • (1996) Proc. of the 28th ACM STOC , pp. 56-63
    • Karger, D.R.1
  • 16
    • 0042565676 scopus 로고
    • Maximum agreement subtree in a set of evolutionary trees - Metrics and efficient algorithms
    • D. Keselman and A. Amir, "Maximum agreement subtree in a set of evolutionary trees - Metrics and efficient algorithms," in Proc. of the 35th FOCS, 1994, pp. 758-769.
    • (1994) Proc. of the 35th FOCS , pp. 758-769
    • Keselman, D.1    Amir, A.2
  • 17
    • 84947940707 scopus 로고    scopus 로고
    • Computing the unrooted maximum agreement subtree in sub-quadratic time
    • T.W. Lam, W.K. Sung, and H.F. Ting, "Computing the unrooted maximum agreement subtree in sub-quadratic time," in Proc. of the 5th SWAT, 1996, pp. 124-135.
    • (1996) Proc. of the 5th SWAT , pp. 124-135
    • Lam, T.W.1    Sung, W.K.2    Ting, H.F.3
  • 19
    • 84857044524 scopus 로고    scopus 로고
    • The asymmetric median tree - A new model for building consensus Trees
    • C. Phillips and T.J. Warnow, "The asymmetric median tree - a new model for building consensus Trees," in Proc. of the 7th CPM, LNCS 1075, 1996, pp. 234-252.
    • (1996) Proc. of the 7th CPM, LNCS 1075 , pp. 234-252
    • Phillips, C.1    Warnow, T.J.2
  • 20
    • 0027912455 scopus 로고
    • Kaikoura tree theorems: Computing the maximum agreement subtree
    • M. Steel and T. Warnow, "Kaikoura tree theorems: Computing the maximum agreement subtree," Information Processing Letters, vol. 48, pp. 77-82, 1993.
    • (1993) Information Processing Letters , vol.48 , pp. 77-82
    • Steel, M.1    Warnow, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.