-
2
-
-
0011091925
-
Nonequilibrium thermodynamics and the stability of states far from equilibrium
-
J.E. Keizer Nonequilibrium thermodynamics and the stability of states far from equilibrium Acc. Chem. Res. 12 1979 243 249
-
(1979)
Acc. Chem. Res.
, vol.12
, pp. 243-249
-
-
Keizer, J.E.1
-
3
-
-
0037453092
-
Extending the definition of entropy to nonequilibrium steady states
-
D.P. Ruelle Extending the definition of entropy to nonequilibrium steady states Proc. Natl. Acad. Sci. U. S. A. 100 2003 3054 3058
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 3054-3058
-
-
Ruelle, D.P.1
-
4
-
-
17244381874
-
Mathematical Theory of Nonequilibrium Steady States
-
Springer New York
-
D.-Q. Jiang, M. Qian, and M.-P. Qian Mathematical Theory of Nonequilibrium Steady States LNM vol. 1833 2004 Springer New York
-
(2004)
LNM
, vol.1833
-
-
Jiang, D.-Q.1
Qian, M.2
Qian, M.-P.3
-
5
-
-
0004155427
-
-
2nd ed. W.H. Freeman San Francisco
-
L. Stryer Biochemistry 2nd ed. 1981 W.H. Freeman San Francisco
-
(1981)
Biochemistry
-
-
Stryer, L.1
-
6
-
-
0036500523
-
Whole-istic biology
-
L. Chong, and L.B. Ray Whole-istic biology Science 295 2002 1661
-
(2002)
Science
, vol.295
, pp. 1661
-
-
Chong, L.1
Ray, L.B.2
-
7
-
-
5044227742
-
The evolution of molecular biology into systems biology
-
H.V. Westerhoff, and B.Ø. Palsson The evolution of molecular biology into systems biology Nat. Biotechnol. 22 2004 1249 1252
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 1249-1252
-
-
Westerhoff, H.V.1
Ø., P.B.2
-
8
-
-
0036679175
-
Concentration fluctuations in a mesoscopic oscillating chemical reaction system
-
H. Qian, S. Saffarian, and E.L. Elson Concentration fluctuations in a mesoscopic oscillating chemical reaction system Proc. Natl. Acad. Sci. U. S. A. 99 2002 10376 10381
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 10376-10381
-
-
Qian, H.1
Saffarian, S.2
Elson, E.L.3
-
9
-
-
18344406027
-
Steady-state thermodynamics of Langevin systems
-
T. Hatano, and S.-i. Sasa Steady-state thermodynamics of Langevin systems Phys. Rev. Lett. 86 2001 3463 3466
-
(2001)
Phys. Rev. Lett.
, vol.86
, pp. 3463-3466
-
-
Hatano, T.1
Sasa, S.-I.2
-
10
-
-
17244373274
-
Non-equilibrium steady-state
-
J.-P. Eckmann Non-equilibrium steady-state Proc. Int. Congr. Math. 3 2002 409 418
-
(2002)
Proc. Int. Congr. Math.
, vol.3
, pp. 409-418
-
-
Eckmann, J.-P.1
-
11
-
-
6344259981
-
Experimental test of Hatano and Sasa's nonequilibrium steady-state equality
-
E.H. Trepagnier, C. Jarzynski, F. Ritort, G.E. Crooks, C.J. Bustamante, and J. Liphardt Experimental test of Hatano and Sasa's nonequilibrium steady-state equality Proc. Natl. Acad. Sci. U. S. A. 101 2004 15038 15041
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 15038-15041
-
-
Trepagnier, E.H.1
Jarzynski, C.2
Ritort, F.3
Crooks, G.E.4
Bustamante, C.J.5
Liphardt, J.6
-
12
-
-
41349105441
-
Entropy production and excess entropy in nonequilibrium steady-state of single macromolecules
-
H. Qian Entropy production and excess entropy in nonequilibrium steady-state of single macromolecules Phys. Rev., E 65 2002 021111
-
(2002)
Phys. Rev., e
, vol.65
, pp. 021111
-
-
Qian, H.1
-
13
-
-
0036243184
-
Thermodynamics of the general diffusion process: Time-reversibility entropy production
-
H. Qian, M. Qian, and X. Tang Thermodynamics of the general diffusion process: time-reversibility entropy production J. Stat. Phys. 107 2002 1129 1141
-
(2002)
J. Stat. Phys.
, vol.107
, pp. 1129-1141
-
-
Qian, H.1
Qian, M.2
Tang, X.3
-
15
-
-
0015581672
-
Network thermodynamics: The analysis of biophysical systems
-
G.F. Oster, A.S. Perelson, and A. Katchalsky Network thermodynamics: the analysis of biophysical systems Q. Rev. Biophys. 6 1973 1 134
-
(1973)
Q. Rev. Biophys.
, vol.6
, pp. 1-134
-
-
Oster, G.F.1
Perelson, A.S.2
Katchalsky, A.3
-
17
-
-
0019622744
-
Markov chain as a model of Hill's theory on circulation
-
C. Qian, M. Qian, and M.-P. Qian Markov chain as a model of Hill's theory on circulation Sci. Sin. 24 1981 1431 1448
-
(1981)
Sci. Sin.
, vol.24
, pp. 1431-1448
-
-
Qian, C.1
Qian, M.2
Qian, M.-P.3
-
18
-
-
0000013996
-
Network theory of microscopic and macroscopic behavior of master equation systems
-
J. Schnakenberg Network theory of microscopic and macroscopic behavior of master equation systems Rev. Mod. Phys. 48 1976 571 585
-
(1976)
Rev. Mod. Phys.
, vol.48
, pp. 571-585
-
-
Schnakenberg, J.1
-
19
-
-
0012745042
-
The structure and analysis of complex reaction systems
-
J. Wei, and C.D. Prater The structure and analysis of complex reaction systems Adv. Catal. 13 1962 203 392
-
(1962)
Adv. Catal.
, vol.13
, pp. 203-392
-
-
Wei, J.1
Prater, C.D.2
-
20
-
-
0034310272
-
The mathematical theory of molecular motor movement and chemomechanical energy transduction
-
H. Qian The mathematical theory of molecular motor movement and chemomechanical energy transduction J. Math. Chem. 27 2000 219 234
-
(2000)
J. Math. Chem.
, vol.27
, pp. 219-234
-
-
Qian, H.1
-
21
-
-
0037187085
-
Equations for stochastic macromolecular mechanics of single proteins: Equilibrium fluctuations, transient kinetics and nonequilibrium steady-state
-
H. Qian Equations for stochastic macromolecular mechanics of single proteins: equilibrium fluctuations, transient kinetics and nonequilibrium steady-state J. Phys. Chem. 106 2002 2065 2073
-
(2002)
J. Phys. Chem.
, vol.106
, pp. 2065-2073
-
-
Qian, H.1
-
23
-
-
33645714534
-
A stochastic analysis of a Brownian ratchet model for actin-based motility
-
H. Qian A stochastic analysis of a Brownian ratchet model for actin-based motility Mech. Chem. Biosys. 2004 (in press)
-
(2004)
Mech. Chem. Biosys.
-
-
Qian, H.1
-
24
-
-
0025895183
-
Toward a science of metabolic engineering
-
J.E. Bailey Toward a science of metabolic engineering Science 252 1991 1668 1674
-
(1991)
Science
, vol.252
, pp. 1668-1674
-
-
Bailey, J.E.1
-
26
-
-
0033136109
-
Metabolic pathway analysis: Basic concepts and scientific applications in post-genomic era
-
C.H. Schilling, S. Schuster, P.Ø. Palsson, and R. Heinrich Metabolic pathway analysis: basic concepts and scientific applications in post-genomic era Biotechnol. Prog. 15 1999 296 303
-
(1999)
Biotechnol. Prog.
, vol.15
, pp. 296-303
-
-
Schilling, C.H.1
Schuster, S.2
Ø., P.P.3
Heinrich, R.4
-
27
-
-
0036286631
-
Energy balance for analysis of complex metabolic networks
-
D.A. Beard, S.-D. Liang, and H. Qian Energy balance for analysis of complex metabolic networks Biophys. J. 83 2002 79 86
-
(2002)
Biophys. J.
, vol.83
, pp. 79-86
-
-
Beard, D.A.1
Liang, S.-D.2
Qian, H.3
-
28
-
-
0037315604
-
Stoichiometric network theory for nonequilibrium biochemical systems
-
H. Qian, D.A. Beard, and S.-D. Liang Stoichiometric network theory for nonequilibrium biochemical systems Eur. J. Biochem. 270 2003 415 421
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 415-421
-
-
Qian, H.1
Beard, D.A.2
Liang, S.-D.3
-
30
-
-
1542327697
-
Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady-states
-
H. Qian, and E.L. Elson Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady-states Proc. Natl. Acad. Sci. U. S. A. 101 2004 2828 2833
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 2828-2833
-
-
Qian, H.1
Elson, E.L.2
-
31
-
-
0034635965
-
Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives
-
V.A. Parsegian, R.P. Rand, and D.C. Rau Osmotic stress, crowding, preferential hydration, and binding: a comparison of perspectives Proc. Nat. Acad. Sci. U. S. A. 97 2000 3987 3992
-
(2000)
Proc. Nat. Acad. Sci. U. S. A.
, vol.97
, pp. 3987-3992
-
-
Parsegian, V.A.1
Rand, R.P.2
Rau, D.C.3
-
32
-
-
0039117927
-
Stoichiometric equations are mathematical equations
-
P.H. Sellers Stoichiometric equations are mathematical equations SIAM J. Appl. Math. 15 1967 637 639
-
(1967)
SIAM J. Appl. Math.
, vol.15
, pp. 637-639
-
-
Sellers, P.H.1
-
33
-
-
0023714694
-
Stoichiometric network analysis
-
B.L. Clarke Stoichiometric network analysis Cell Biophys. 12 1988 237 253
-
(1988)
Cell Biophys.
, vol.12
, pp. 237-253
-
-
Clarke, B.L.1
-
34
-
-
0002066151
-
Nonlinear kinetics and new approaches to complex reaction mechanism
-
J. Ross, and M.O. Vald Nonlinear kinetics and new approaches to complex reaction mechanism Annu. Rev. Phys. Chem. 50 1999 51 78
-
(1999)
Annu. Rev. Phys. Chem.
, vol.50
, pp. 51-78
-
-
Ross, J.1
Vald, M.O.2
-
35
-
-
0032485842
-
How will bioinformatics influence metabolic engineering?
-
J.S. Edwards, and B.Ø. Palsson How will bioinformatics influence metabolic engineering? Biotechnol. Bioeng. 58 1998 162 169
-
(1998)
Biotechnol. Bioeng.
, vol.58
, pp. 162-169
-
-
Edwards, J.S.1
Ø., P.B.2
-
36
-
-
0034625143
-
The E. coli MG1655 in silico metabolic genotype: Its definition, characteristics, and capability
-
J.S. Edwards, and B.Ø. Palsson The E. coli MG1655 in silico metabolic genotype: its definition, characteristics, and capability Proc. Natl. Acad. Sci. U. S. A. 97 2000 5528 5533
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 5528-5533
-
-
Edwards, J.S.1
Ø., P.B.2
-
37
-
-
17244377629
-
Thermodynamic-based computational profiling of cellular regulatory control in hepatocyte metabolism
-
D.A. Beard, and H. Qian Thermodynamic-based computational profiling of cellular regulatory control in hepatocyte metabolism Am. J. Physiol., Endocrinol. Metabol. 2004 (in press)
-
(2004)
Am. J. Physiol., Endocrinol. Metabol.
-
-
Beard, D.A.1
Qian, H.2
-
41
-
-
0013078224
-
The linear Onsager coefficients for biochemical kinetic diagrams as equilibrium one-way cycle fluxes
-
T.L. Hill The linear Onsager coefficients for biochemical kinetic diagrams as equilibrium one-way cycle fluxes Nature 299 1982 84 86
-
(1982)
Nature
, vol.299
, pp. 84-86
-
-
Hill, T.L.1
-
42
-
-
50349142176
-
Fluctuations in chemical equilibrium
-
I. Prigogine Fluctuations in chemical equilibrium Physica 16 1950 134 135
-
(1950)
Physica
, vol.16
, pp. 134-135
-
-
Prigogine, I.1
-
44
-
-
0039117925
-
Mass action laws and the Gibbs free energy function
-
N.Z. Shapiro, and L.S. Shapley Mass action laws and the Gibbs free energy function SIAM J. Appl. Math. 13 1965 353 375
-
(1965)
SIAM J. Appl. Math.
, vol.13
, pp. 353-375
-
-
Shapiro, N.Z.1
Shapley, L.S.2
-
45
-
-
0015111533
-
Tellegen's theorem and thermodynamic inequalities
-
G.F. Oster, and C.A. Desoer Tellegen's theorem and thermodynamic inequalities J. Theor. Biol. 32 1971 219 241
-
(1971)
J. Theor. Biol.
, vol.32
, pp. 219-241
-
-
Oster, G.F.1
Desoer, C.A.2
|