Evaluation of the potential for using molecular approaches to deduce redox conditions in groundwater contaminant plumes

Annals of Microbiology

Volumn 55, Issue 1, 2005, Pages 9-16

  Tian, Yang Jie ^a   Yang, Hong ^a   Li, Dao Tang ^a   Lin, Zhi Xin ^a  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

Author keywords

16S rRNA; Clone library; Groundwater; Landfill; Redox conditions

Indexed keywords

EID: 17144381307     PISSN: 15904261     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (17)

1. Anderson R.T., Rooney-Vargaj J.N., Gaw C.V., Lovley D.R. (1998). Anaerobic benzene oxidation in the Fe(III) reduction zone of petroleum-contaminated aquifers. Environ. Sci. Technol., 32: 1222-1229.
2. Bjerg P.L., Rugge K., Pedersen J.K., Christensen T.H. (1995). Distribution of redox sensitive groundwater quality parameters downgradient of a landfill (Grindsted, Denmark). Environ. Sci. Technol., 29: 1387-1394.
3. Brockman F.J., Li S.W., Fredrickson J.K., Ringelberg D.B., Kieft T.L., Spadoni C.M., White D.C., McKinley J.P. (1998). Post-sampling changes in microbial community composition and activity in a subsurface paleosol. Microb. Ecol., 36: 152-164.
4. Brune A., Evers S., Kaim G., Ludwig W., Schink B. (2002). Ilyobacter insuetus sp. nov., a fermentative bacterium specialized in the degradation of hydroaromatic compounds. Int. J. Syst. Evol. Microbiol., 52: 429-432.
5. Christensen T.H., Bjerg P.L., Banwart S.A., Jakobsen R., Heron G., Albrechtsen H. (2000). Characterization of redox conditions in groundwater contaminant plumes. J. Contam. Hydrol., 45: 165-241.
6. Devereux R., Hines M.E., Stahl D.A. (1996). S cycling: characterization of natural communities of sulfate-reducing bacteria by 16S-rRNA sequence comparisons. Microb. Ecol., 32: 283-292.
7. th edn., American Public Health Association, Washington DC.
8. Hess A., Zarda B., Hahn D., Haner A., Stax A., Hohener P., Zeyer J. (1997). In situ analysis of denitrifying toluene- and m-xylene-degrading bacteria in a diesel fuel-contaminated laboratory aquifer column. Appl. Environ. Microbiol., 63: 2136-2141.
9. Ludvigsen L., Albrechtsen H.J., Heron G., Bjerg P.L., Christensen T.H. (1998). Anaerobic microbial redox processes in a landfill leachate contaminated aquifer (Grindsted, Denmark). J. Contam. Hydrol., 33: 273-291.
10. Ludvigsen L., Albrechtsen H.J., Ringelberg D.B., Ekelund F., Christensen T.H. (1999). Composition and distribution of microbial biomass in a landfill leachate contaminated aquifer (Grindsted, Denmark). Microb. Ecol., 37, 197-207.
11. Martin-Laurent F., Philippot L., Hallet S., Chaussod R., Germon J.C., Soulas G., Catroux G. (2001). DNA extraction from soils: old bias for new microbial diversity analysis methods. Appl. Environ. Microbiol., 67: 2354-2359.
12. Polz M.F., Cavanaugh C.M. (1998). Bias in template-to-product ratios in multitemplate PCR. Appl. Environ. Microbiol., 64: 3724-3730.
13. Ramsing N.B., Fossing H., Ferdelman T.G., Andersen F., Thamdrup B. (1996). Distribution of bacterial populations in a stratified fjord (Mariager Fjord, Denmark) quantified by in situ hybridization to chemical gradient in the water column. Appl. Environ. Microbiol., 62: 1392-1404.
14. Röling W.F.M, Breukelen B.M., Braster M., Goeltom M.T., Groen J., Verseveld H.W. (2000). Analysis of microbial communities in a landfill leachate polluted aquifer using a new method for anaerobic physiological profiling and 16S rDNA based fingerprinting. Microb. Ecol., 40: 177-188.
15. Röling W.F.M, Breukelen B.M., Braster M., Lin B., Verseveld H.W. (2001). Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer. Appl. Environ. Microbiol., 67: 4919-4629.
16. Smith R.J., Tiedje J.M. (1992). Isolation and characterization of a nitrite reductase gene and its use as a probe for denitrifying bacteria. Adv. Appl. Microbiol., 58; 376-384.
17. Yu Z., Mohn W.W. (2001). Bacterial diversity and community structure in an aerated lagoon revealed ribosomal intergenic spacer analysis and 16S ribosomal DNA sequencing. Appl. Environ. Microbiol., 67: 1565-1574.