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Volumn 2, Issue 1, 2005, Pages 13-21

Autocorrelation of Molecular Electrostatic Potential surface properties combined with partial least squares analysis as alternative attractive tool to generate ligand-based 3D-QSARs

Author keywords

3D QSAR; Autocorrelation Vectors; Comparative Molecular Field Analysis (CoMFA); Molecular Electrostatic Potential (MEP); Partial Least Squares (PLS); A 3 Adenosine Receptor Antagonists

Indexed keywords

ADENOSINE RECEPTOR BLOCKING AGENT; PYRIMIDINE DERIVATIVE;

EID: 16844364506     PISSN: 15701638     EISSN: None     Source Type: Journal    
DOI: 10.2174/1570163053175439     Document Type: Article
Times cited : (81)

References (27)
  • 3
    • 0023751431 scopus 로고
    • Comparative molecular field analysis (CoMFA). I. Effect of shape on binding of steroids to carrier proteins
    • Cramer R.D., Patterson D.E., Bunce J.D.: Comparative Molecular Field Analysis (CoMFA). I. Effect of Shape on Binding of Steroids to Carrier Proteins. J. Am. Chem. Soc. 110, 5959, (1988).
    • (1988) J. Am. Chem. Soc. , vol.110 , pp. 5959
    • Cramer, R.D.1    Patterson, D.E.2    Bunce, J.D.3
  • 4
    • 0000583538 scopus 로고
    • Representation of molecular electrostatic potentials by topological feature maps
    • Gasteiger J., Li X., Rudolph C., Sadowsky J., Zupan J.: Representation of Molecular Electrostatic potentials by Topological Feature Maps. J. Am. Chem. Soc. 116, 4608, (1994).
    • (1994) J. Am. Chem. Soc. , vol.116 , pp. 4608
    • Gasteiger, J.1    Li, X.2    Rudolph, C.3    Sadowsky, J.4    Zupan, J.5
  • 5
    • 0028851251 scopus 로고
    • Autocorrelation of molecular surface properties for modeling corlicosteroid binding globulin and cytosolic Ah receptor activity by neural networks
    • Wagener M., Sadowsky J., Gasteiger J.: Autocorrelation of Molecular Surface Properties for Modeling Corlicosteroid Binding Globulin and Cytosolic Ah Receptor Activity by Neural Networks. J. Am. Chem. Soc. 117, 7769, (1995).
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 7769
    • Wagener, M.1    Sadowsky, J.2    Gasteiger, J.3
  • 8
    • 0034710718 scopus 로고    scopus 로고
    • Grid independent descriptors (GRIND). A novel class of alignment-indipendent threedimensional molecular descpriplors
    • Pastor M., Cruciali G., McLay I., Pickett S., Clementi S.: Grid Independent descriptors (GRIND). A Novel Class of Alignment-Indipendent Threedimensional Molecular Descpriplors. J. Med. Chem. 43 3233, (2000).
    • (2000) J. Med. Chem. , vol.43 , pp. 3233
    • Pastor, M.1    Cruciali, G.2    McLay, I.3    Pickett, S.4    Clementi, S.5
  • 9
    • 1842690578 scopus 로고    scopus 로고
    • Topological distance based 3D descriptors for use in QSAR and diversity analysis
    • Klein C.T., Kaiser D., Ecker G.: Topological Distance Based 3D Descriptors for Use in QSAR and Diversity Analysis. J. Chem. Inf. Comput. Sci. 44, 200, (2004).
    • (2004) J. Chem. Inf. Comput. Sci. , vol.44 , pp. 200
    • Klein, C.T.1    Kaiser, D.2    Ecker, G.3
  • 11
    • 0347510989 scopus 로고    scopus 로고
    • Demystifying the three dimensional structure of G protein-coupled receptors (GPCRs) with the aid of molecular modeling
    • Moro S., Deflorian F., Spalluto G., Pastorin G., Cacciari B., Kim K., Jacobson K. A.: Demystifying the three dimensional structure of G protein-coupled receptors (GPCRs) with the aid of molecular modeling. Chem Commun (Camb) 21, 2949, (2003).
    • (2003) Chem Commun (Camb) , vol.21 , pp. 2949
    • Moro, S.1    Deflorian, F.2    Spalluto, G.3    Pastorin, G.4    Cacciari, B.5    Kim, K.6    Jacobson, K.A.7
  • 13
    • 11144241002 scopus 로고    scopus 로고
    • Techniques: Recent developments in computer-aided engineering of GPCR ligands using the human A 3 adenosine receptor as an example
    • Moro S., Spalluto G., Jacobson K.A.: Techniques: Recent developments in computer-aided engineering of GPCR ligands using the human A3 adenosine receptor as an example. Trends Pharmacol. Sci. 26, 44, (2005).
    • (2005) Trends Pharmacol. Sci. , vol.26 , pp. 44
    • Moro, S.1    Spalluto, G.2    Jacobson, K.A.3
  • 14
    • 0037075142 scopus 로고    scopus 로고
    • Synthesis. Biological activity, and molecular modeling investigation of new pyrazolo[4,3-e]-1,2,4-triazolo[1,5-c]pyrimidine derivatives as human A 3 adenosine receptor antagonists
    • Baraldi P.G., Cacciari B., Moro S., Spalluto G., Pastorin G., Da Ros T.N., Varani K., Gessi S., et al.: Synthesis. Biological Activity, and Molecular Modeling Investigation of New Pyrazolo[4,3-e]-1,2,4-triazolo[1,5-c]pyrimidine Derivatives as Human A3 Adenosine Receptor Antagonists. J. Med. Chem. 45, 770, (2002).
    • (2002) J. Med. Chem. , vol.45 , pp. 770
    • Baraldi, P.G.1    Cacciari, B.2    Moro, S.3    Spalluto, G.4    Pastorin, G.5    Da Ros, T.N.6    Varani, K.7    Gessi, S.8
  • 15
    • 16844362191 scopus 로고    scopus 로고
    • Molecular Networks GmbH: Erlangen, Germany
    • CORINA; Molecular Networks GmbH: Erlangen - Germany, (2003).
    • (2003) CORINA
  • 16
    • 49149147973 scopus 로고
    • Iterative partial equalisation of orbital electronegativity - A rapid access to atomic charges
    • Gasteiger J., Marsili M.: Iterative Partial Equalisation of Orbital Electronegativity - A Rapid Access to Atomic Charges. Tetrahedron 36, 3219, (1980).
    • (1980) Tetrahedron , vol.36 , pp. 3219
    • Gasteiger, J.1    Marsili, M.2
  • 17
    • 0001244198 scopus 로고
    • Berechnung der ladungsverteilung in konjugierten systemen durch eine quantifizierung des mesomeriekonzeptes
    • Gasteiger J., Saller H.: Berechnung der Ladungsverteilung in konjugierten Systemen durch eine Quantifizierung des Mesomeriekonzeptes. Angew. Chem. 97, 699, (1985).
    • (1985) Angew. Chem. , vol.97 , pp. 699
    • Gasteiger, J.1    Saller, H.2
  • 18
    • 19944429228 scopus 로고    scopus 로고
    • Combined target-based and ligand-based drug design approach as tool to define a novel 3D-pharmacophore model of human A3 adenosine receptor antagonists: Pyrazolo[4,3-e]1,2,4-triazolo[1,5-c]pyrimidine derivatives as a key study
    • Moro S., Braiuca P., Deflorian F., Pastorin G., Cacciari B., Baraldi P.G., Varani K., Borea P.A., et al.: Combined target-based and ligand-based drug design approach as tool to define a novel 3D-pharmacophore model of human A3 adenosine receptor antagonists: pyrazolo[4,3-e]1,2,4-triazolo[1,5-c]pyrimidine derivatives as a key study. J. Med. Chem. 48, 152, (2005).
    • (2005) J. Med. Chem. , vol.48 , pp. 152
    • Moro, S.1    Braiuca, P.2    Deflorian, F.3    Pastorin, G.4    Cacciari, B.5    Baraldi, P.G.6    Varani, K.7    Borea, P.A.8
  • 20
    • 16844369721 scopus 로고    scopus 로고
    • OpenMosix: http://www.openMosix.org (2004).
    • (2004)
  • 21
    • 16844370867 scopus 로고    scopus 로고
    • Molecular Networks GmbH: Erlangen, Germany
    • ADRIANA; Molecular Networks GmbH: Erlangen - Germany, (2003).
    • (2003) ADRIANA
  • 22
    • 16844366586 scopus 로고
    • TRIPOS Associates: St. Louis MO
    • SYBYL 6.5; TRIPOS Associates: St. Louis MO (1993).
    • (1993) SYBYL 6.5
  • 23
    • 0001057103 scopus 로고
    • The autocorrelation of a topological structure: A new molecular descriptor
    • Moreau G., Broto P.: The Autocorrelation of a Topological Structure: a new Molecular Descriptor. Nouv. J. Chim. 4, 359, (1980).
    • (1980) Nouv. J. Chim. , vol.4 , pp. 359
    • Moreau, G.1    Broto, P.2
  • 24
    • 0001486261 scopus 로고
    • Autocorrelation of molecular structures. Application to SAR studies
    • Moreau G., Broto P.: Autocorrelation of Molecular Structures. Application to SAR Studies. Nouv. J. Chim. 4, 757, (1980).
    • (1980) Nouv. J. Chim. , vol.4 , pp. 757
    • Moreau, G.1    Broto, P.2
  • 25
    • 16844377673 scopus 로고    scopus 로고
    • CAMO Process AS: Oslo - Norway
    • THE UNSCRUMBLER 9.0; CAMO Process AS: Oslo - Norway (2003).
    • (2003) THE UNSCRUMBLER 9.0
  • 26
    • 84987100711 scopus 로고
    • Cross-validation, bootstrapping, and partial least squares compared with multiple regression in conventional QSAR studies
    • Cramer RD III., Bunce JD., Patterson DE., Frank IE.: Cross-Validation, Bootstrapping, and Partial Least Squares Compared with Multiple Regression in Conventional QSAR Studies. Quant. Struct.-Act. Relat. 7, 18, (1988).
    • (1988) Quant. Struct.-Act. Relat. , vol.7 , pp. 18
    • Cramer III, R.D.1    Bunce, J.D.2    Patterson, D.E.3    Frank, I.E.4
  • 27
    • 0027762073 scopus 로고
    • Three-dimensional QSAR of human immunodeficiency virus (I) prolease inhibitors. I. A CoMFA study employing experimentally-determined alignment rules
    • Waller C.L.O., Giolitti A., Marshall G.R.: Three-Dimensional QSAR of Human Immunodeficiency Virus (I) Prolease Inhibitors. I. A CoMFA Study Employing Experimentally-Determined Alignment Rules. J. Med. Chem. 36, 4152, (1993).
    • (1993) J. Med. Chem. , vol.36 , pp. 4152
    • Waller, C.L.O.1    Giolitti, A.2    Marshall, G.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.