Detection of human Coronavirus 229E in nasal specimens in large scale studies using an RT-PCR hybridization assay

Molecular and Cellular Probes

Volumn 18, Issue 2, 2004, Pages 75-80

  Vallet, Sophie ^a   Gagneur, Arnaud ^b   Talbot, Pierre J ^c   Legrand, Marie Christine ^a   Sizun, Jacques ^b   Picard, Bertrand ^a  

^a CHU MORVAN   (France)

^b BREST UNIVERSITY HOSPITAL   (France)

^c INRS INSTITUT ARMAND FRAPPIER   (Canada)

Author keywords

Human Coronavirus; Neonates; Nosocomial respiratory viral infections; Reverse transcription PCR

Indexed keywords

VIRUS ANTIGEN;

ARTICLE; CELL CULTURE; CELL HYBRIDIZATION; CHILD; CONTROLLED STUDY; CORONAVIRUS; DIAGNOSTIC ACCURACY; HOSPITALIZATION; HUMAN; HUMAN CELL; HUMAN CORONAVIRUS 229E; HUMAN CORONAVIRUS 229E INFECTION; INCIDENCE; INFECTION RATE; MAJOR CLINICAL STUDY; NEWBORN; NONHUMAN; NOSE SMEAR; PRIORITY JOURNAL; RELIABILITY; RESPIRATORY TRACT INFECTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TECHNIQUE; VIRUS DETECTION; VIRUS INFECTION;

ADENOVIRIDAE; CELL LINE; CHILD; CHILD, PRESCHOOL; CORONAVIRUS 229E, HUMAN; CORONAVIRUS INFECTIONS; CROSS INFECTION; HUMANS; IMMUNOENZYME TECHNIQUES; INFANT, NEWBORN; NASAL MUCOSA; NUCLEIC ACID HYBRIDIZATION; RESPIRATORY TRACT INFECTIONS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA VIRUSES;

CORONAVIRUS; HUMAN CORONAVIRUS 229E;

EID: 1642568138     PISSN: 08908508     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mcp.2003.09.005     Document Type: Article

References (29)

1. Ksiazek T.G., Erdman D., Goldsmith C.S., Zaki S.R., Peret T., Emery S., Tong S., Urbani C., Comer J.A., Lim W., Rollin P.E.D.S., Ling A.E., Humphery C.D., Shieh W.J., Guarner J.P.C., Rota P., Fields B., DeRisi J., Yang J.Y., Cox N., Hughes J.M., LeDuc J.W., Bellini W.J.A.L A novel Coronavirus associated with severe acute respiratory syndrome. N Engl J Med. 348:2003;1947-1958.
2. Hamre D., Procknow J.J. A new virus isolated from the human respiratory tract. Proc Soc Exp Biol. 121:1966;190-193.
3. Gagneur A., Legrand M.C., Picard B., Baron R., Talbot P.J., De Parscau L., Sizun J. Nosocomial infections due to human Coronaviruses in the newborn. Arch Pediatr. 9:2002;61-69.
4. Sizun J., Gagneur A., Legrand M.C., Baron R. Respiratory Coronavirus infections in children. Pediatr Infect Dis J. 20:2001;555-556.
5. Gagneur A., Sizun J., Vallet S., Legr M.C., Picard B., Talbot P.J. Coronavirus-related nosocomial viral respiratory infections in a neonatal and paediatric intensive care unit: a prospective study. J Hosp Infect. 51:2002;59-64.
6. Myint S. Human Coronavirus. In: The Coronaviridae. 1995. Siddell SG, editor. New York: Plenum Press. p. 389-401.
7. Sizun J., Arbour N., Talbot P.J. Comparison of immunofluorescence with monoclonal antibodies and RT-PCR for the detection of human Coronaviruses 229E and OC43 in cell culture. J Virol Meth. 72:1998;145-152.
8. Stewart JN, Mounir S, Talbot PJ. Detection of coronaviruses by the polymerase chain reaction. In: Diagnosis of human viruses by polymerase chain reaction technology. 1995. Becker Y, Daraï G, editors. New York: Springer-Verlag. p. 316-27.
9. Myint S., Johnston S., Sanderson G., Simpson H. Evaluation of nested polymerase chain methods for the detection of human coronaviruses 229E and OC43. Mol Cell Probes. 8:1994;357-364.
10. Barnes S.D., Leclair J.M., Forman M.S., Townsend T.R., Laughlin G.M., Charache P. Comparison of nasal brush and nasopharyngeal aspirate techniques in obtaining specimens for detection of respiratory syncytial viral antigen by immunofluorescence. Pediatr Infect Dis J. 8:1989;598-601.
11. Schreiber S.S., Kamahora T., Lai M.M. Sequence analysis of the nucleocapsid protein gene of human coronavirus 229E. Virology. 169:1989;142-151.
12. Monto A.S., Lim S.K. The Tecumseh study of respiratory illness. VI. Frequency of and relationship between outbreaks of coronavirus infection. J Infect Dis. 129:1974;271-276.
13. Freymuth F., Eugene G., Vabret A., Petitjean J., Gennetay E., Brouard J., Duhamel J.F., Guillois B. Detection of respiratory syncytial virus by reverse transcription-PCR and hybridization with a DNA enzyme immunoassay. J Clin Microbiol. 33:1995;3352-3355.
14. Ieven M., Goossens H. Relevance of nucleic acid amplification techniques for diagnosis of respiratory tract infections in the clinical laboratory. Clin Microbiol Rev. 10:1997;242-256.
15. Halonen P., Rocha E., Hierholzer J., Holloway B., Hyypia T., Hurskainen J., Pallansch M. Detection of enteroviruses and rhinoviruses in clinical specimens by PCR and liquid-phase hybridization. J Clin Microbiol. 33:1995;648-653.
16. Vabret A., Mouthon F., Mourez T., Gouarin S., Petitjean J., Freymuth F. Direct diagnosis of human respiratory coronaviruses 229E and OC43 by the polymerase chain reaction. J Virol Meth. 97:2001;59-66.
17. Nokso-Koivisto J., Kinnari T.J., Lindahl P., Hovi T., Pitkaranta A. Human picornavirus and coronavirus RNA in nasopharynx of children without concurrent respiratory symptoms. J Med Virol. 66:2002;417-420.
18. Arbour N., Day R., Newcombe J., Talbot P.J. Neuroinvasion by human respiratory coronaviruses. J Virol. 74:2000;8913-8921.
19. Lina B., Valette M., Foray S., Luciani J., Stagnara J., See D.M., Aymard M. Surveillance of community-acquired viral infections due to respiratory viruses in Rhone-Alpes (France) during winter 1994 to 1995. J Clin Microbiol. 34:1996;3007-3011.
20. Riski H., Hovi T. Coronavirus infections of man associated with diseases other than the common cold. J Med Virol. 6:1980;259-265.
21. Freymuth F., Vabret A., Brouard J., Toutain F., Verdon R., Petitjean J., Gouarin S., Duhamel J.F., Guillois B. Detection of viral, Chlamydia pneumoniae and Mycoplasma pneumoniae infections in exacerbations of asthma in children. J Clin Virol. 13:1999;131-139.
22. Johnston S.L., Pattemore P.K., Sanderson G., Smith S., Lampe F., Josephs L., Symington P., O'Toole S., Myint S.H., Tyrrell D.A., Holgate S.T. Community study of role of viral infections in exacerbations of asthma in 9-11 year old children. BMJ. 310:1995;1225-1229.
23. Vernotte E., Legrand M.C., Gagneur A., Salmon J., Sizun J., de Parscau L. Asthma exacerbation: declenching role of coronaviruses is not confirmed. Arch Pediatr. 6:1999;583s.
24. Resta S., Luby J.P., Rosenfeld C.R., Siegel J.D. Isolation and propagation of a human enteric coronavirus. Science. 229:1985;978-981.
25. Sizun J., Soupre D., Giroux J.D., Alix D., De Parscau L., Legrand M.C., Demazure M., Chastel C. Nasal colonization with coronavirus and apnea of the premature newborn. Acta Paediatr. 82:1993;238.
26. Sizun J., Soupre D., Legrand M.C., Giroux J.D., Rubio S., Cauvin J.M., Chastel C., Alix D., De Parscau L. Neonatal nosocomial respiratory infection with coronavirus: a prospective study in a neonatal intensive care unit. Acta Paediatr. 84:1995;617-620.
27. Sizun J., Yu M.W., Talbot P.J. Survival of human coronaviruses 229E and OC43 in suspension and after drying onsurfaces: a possible source of hospital-acquired infections. J Hosp Infect. 46:2000;55-60.
28. Ijaz M.K., Brunner A.H., Sattar S.A., Nair R.C., Johnson-Lussenburg C.M. Survival characteristics of airborne human coronavirus 229E. J Gen Virol. 66:1985;2743-2748.
29. Gagneur A.V.S., Legrand M.C., Picard B., Talbot P., Sizun J. Human Coronavirus-related outbreaks in a neonatal and pediatric intensive care unit. Pediatric Academic Societies' Annual Meeting. 2002.