Relatedness inferred from microsatellite genotypes as a tool for broodstock management of Japanese flounder Paralichthys olivaceus

Aquaculture

Volumn 233, Issue 1-4, 2004, Pages 163-172

  Sekino, Masashi ^a   Sugaya, Takuma ^b   Hara, Motoyuki ^c   Taniguchi, Nobuhiko ^d  

^a FISHERIES RESEARCH AGENCY   (Japan)

^b JAPAN FISHERIES RESEARCH AND EDUCATION AGENCY   (Japan)

^c FISHERIES RESEARCH AGENCY   (Japan)

^d TOHOKU UNIVERSITY   (Japan)

Author keywords

Conservation genetics; Japanese flounder; Kinships; Microsatellites; Paralichthys olivaceus; Relatedness

Indexed keywords

BROOD STOCK; FISH CULTURE; FLATFISH; GENETIC VARIATION; RELATEDNESS;

PARALICHTHYS; PARALICHTHYS OLIVACEUS; PLEURONECTOIDEI;

EID: 1642404725     PISSN: 00448486     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquaculture.2003.11.008     Document Type: Article

References (28)

1. Allendorf F.W. Genetic drift and the loss of alleles versus heterozygosity. Zoo Biol. 5:1986;181-190.
2. Ballou J.D., Lacy R.C. Identifying genetically important individuals for management of genetic variation in pedigreed populations. Ballou J.D., Gilpin M., Foose T.J. Population Management for Survival and Recovery. 1995;76-111 Columbia Univ. Press, New York.
3. Blouin M.S., Parsons M., Lacaille V., Lotz S. Use of microsatellite loci to classify individuals by relatedness. Mol. Ecol. 5:1996;393-401.
4. Caballero A., Toro M.A. Interrelations between effective population size and other pedigree tools for the management of conserved populations. Genet. Res. Camb. 75:2000;331-343.
5. Caballero A., Santiago E., Toro M.A. Systems of mating to reduce inbreeding in selected populations. Anim. Sci. 62:1996;431-442.
6. Doyle R.W., Perez-Enriquez R., Takagi M., Taniguchi N. Selective recovery of founder genetic diversity in aquacultural broodstocks and captive, endangered fish populations. Genetica. 111:2001;291-304.
7. Falconer D.S., MacKay T.F.C. Introduction to Quantitative Genetics. 4th ed. 1996;Addison Wesley Pub. Boston, MA. 464 pp.
8. FAO Report of the expert consultation on utilization and conservation of aquatic genetic resources. FAO Fish. Rep. vol. 491:1993;Food and Agriculture Organization of the United Nations, Rome.
9. FAO/UNEP Conservation of the genetic resources of fish: problems and recommendations. Report of the Expert Consultation on the Genetic Resources of Fish, Rome, 9-13 June 1980. FAO Fish. Tech. Pap. vol. 217:1981;1-43.
10. Fernández J., Caballero A. A comparison of management strategies for conservation with regard to population fitness. Conserv. Genet. 2:2001;121-131.
11. Fontaine P.M., Dodson J.J. An analysis of the distribution of juvenile Atlantic salmon (Salmo salar) in nature as a function of relatedness using microsatellites. Mol. Ecol. 8:1999;189-198.
12. Hara M., Sekino M. Efficient detection of parentage in a cultured Japanese flounder Paralichthys olivaceus using microsatellite DNA marker. Aquaculture. 217:2003;107-114.
13. Lacy R.C. Clarification of genetic terms and their use in the management of captive populations. Zoo Biol. 14:1995;565-578.
14. Lacy R.C. Should we select genetic alleles in our conservation breeding programs? Zoo Biol. 19:2000;279-282.
15. MacCleur J.W., VandeBerg J.L., Read B., Ryder O.A. Pedigree analysis by computer simulation. Zoo Biol. 5:1986;147-160.
16. Montgomery M.E., Ballou J.D., Nurthen R.K., England P.R., Briscoe D.A., Frankham R. Minimizing kinship in captive breeding programs. Zoo Biol. 16:1997;377-389.
17. Nei M. Molecular Evolutionary Genetics. 1987;Columbia Univ. Press, New York.
18. Norris A.T., Bradley D.G., Cunningham E.P. Parentage and relatedness determination in farmed Atlantic salmon (Salmo salar) using microsatellite markers. Aquaculture. 182:2000;73-83.
19. Queller D.C., Goodnight K.F. Estimating relatedness using genetic markers. Evolution. 43:1989;258-275.
20. Ritland K. Marker-inferred relatedness as a tool for detecting heritability in nature. Mol. Ecol. 9:2000;1195-1204.
21. Rodríguez-Clark K.M. Genetic theory and evidence supporting current practices in captive breeding for conservation. Landweber L.F., Dobson A.P. Genetics, and the Extinction of Species. 1999;47-73 Princeton Univ. Press, Princeton, NJ.
22. Santiago E., Caballero A. Effective size of populations under selection. Genetics. 151:1995;1103-1114.
23. Sekino M., Hara M. Isolation and characterization of microsatellite DNA loci in a Japanese flounder Paralichthys olivaceus (Pleuronectiformes Pleuronectoidei, Paralichthyidae). Mol. Ecol. 9:2000;2200-2202.
24. Sekino M., Hara M. Application of microsatellite markers to population genetics studies of Japanese flounder Paralichthys olivaceus. Mar. Biotechnol. 3:2001;572-589.
25. Sekino M., Saitoh K., Yamada T., Kumagai A., Hara M., Yamashita Y. Microsatellite-based pedigree tracing in a Japanese flounder Paralichthys olivaceus hatchery strain: implications for hatchery management related to stock enhancement program. Aquaculture. 221:2003;255-263.
26. Sokal R.R., Rohlf F.J. Biometry. 3rd ed. 1997;Freeman, New York. 887 pp.
27. Sugaya T., Ikeda M., Taniguchi N. Relatedness structure estimated by microsatellite DNA and mitochondrial DNA polymerase chain reaction-restriction fragment polymorphisms analysis in the wild population of kuruma prawn Penaeus japonicus. Fish. Sci. 68:2002;793-802.
28. Taylor A.C., Horsup A., Johnson C.N., Sunnucks P., Sherwin B. Relatedness structure detected by microsatellite analysis and attempted pedigree reconstruction in an endangered marsupial, the northern hairy-nosed wombat Lasiorhinus krefftii. Mol. Ecol. 6:1997;9-19.