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Volumn 271, Issue 6, 2004, Pages 1117-1126

Chromophore selectivity in bacterial phytochromes: Dissecting the process of chromophore attachment

Author keywords

Bacteriophytochrome; Biliverdin; Cyanobacteria; Photoreceptor; Phycocyanobilin

Indexed keywords

BILIVERDIN; CARBONYL DERIVATIVE; CYSTEINE; DITHIOTHREITOL; HISTIDINE; IMIDAZOLE; PHYCOCYANOBILIN; PHYTOCHROME; PHYTOCHROME CPHA; PHYTOCHROME CPHB; SCHIFF BASE; UNCLASSIFIED DRUG;

EID: 1642299060     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1432-1033.2004.04015.x     Document Type: Article
Times cited : (36)

References (37)
  • 1
    • 0030606607 scopus 로고    scopus 로고
    • Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
    • Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S. et al. (1996) Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. DNA Res. 3, 109-136.
    • (1996) DNA Res. , vol.3 , pp. 109-136
    • Kaneko, T.1    Sato, S.2    Kotani, H.3    Tanaka, A.4    Asamizu, E.5    Nakamura, Y.6    Miyajima, N.7    Hirosawa, M.8    Sugiura, M.9    Sasamoto, S.10
  • 3
    • 0034857464 scopus 로고    scopus 로고
    • Characterization of the Cph1 holo-phytochrome from Synechocystis sp PCC 6803
    • Hübschmann, T., Börner, T., Hartmann, E. & Lamparter, T. (2001) Characterization of the Cph1 holo-phytochrome from Synechocystis sp PCC 6803. Eur. J. Biochem. 268, 2055-2063.
    • (2001) Eur. J. Biochem. , vol.268 , pp. 2055-2063
    • Hübschmann, T.1    Börner, T.2    Hartmann, E.3    Lamparter, T.4
  • 4
    • 0025970168 scopus 로고
    • Phytochromes and bacterial sensor proteins are related by structural and functional homologies. Hypothesis on phytochrome-mediated signal-transduction
    • Schneider-Poetsch, H.A.W., Braun, B., Marx, S. & Schaumberg, A. (1991) Phytochromes and bacterial sensor proteins are related by structural and functional homologies. Hypothesis on phytochrome-mediated signal-transduction. FEBS Lett. 281, 245-249.
    • (1991) FEBS Lett. , vol.281 , pp. 245-249
    • Schneider-Poetsch, H.A.W.1    Braun, B.2    Marx, S.3    Schaumberg, A.4
  • 5
    • 0032506138 scopus 로고    scopus 로고
    • Eukaryotic phytochromes: Light-regulated serine/threonine protein kinases with histidine kinase ancestry
    • Yeh, K.C. & Lagarias, J.C. (1998) Eukaryotic phytochromes: Light-regulated serine/threonine protein kinases with histidine kinase ancestry. Proc. Natl. Acad. Sci. USA 95, 13976-13981.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 13976-13981
    • Yeh, K.C.1    Lagarias, J.C.2
  • 6
    • 0030473678 scopus 로고    scopus 로고
    • Are the phytochromes protein kinases?
    • Boylan, M.T. & Quail, P.H. (1996) Are the phytochromes protein kinases? Protoplasma 195, 12-17.
    • (1996) Protoplasma , vol.195 , pp. 12-17
    • Boylan, M.T.1    Quail, P.H.2
  • 7
    • 0032506145 scopus 로고    scopus 로고
    • Higher-plant phytochrome: "I used to date histidine, but now I prefer serine"
    • Cashmore, A.R. (1998) Higher-plant phytochrome: "I used to date histidine, but now I prefer serine". Proc. Natl Acad. Sci. USA 95, 13358-13360.
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 13358-13360
    • Cashmore, A.R.1
  • 8
    • 0030865349 scopus 로고    scopus 로고
    • A cyanobacterial phytochrome two-component light sensory system
    • Yeh, K.-C., Wu, S.-H., Murphy, J.T. & Lagarias, J.C. (1997) A cyanobacterial phytochrome two-component light sensory system. Science 277, 1505-1508.
    • (1997) Science , vol.277 , pp. 1505-1508
    • Yeh, K.-C.1    Wu, S.-H.2    Murphy, J.T.3    Lagarias, J.C.4
  • 9
    • 0034818026 scopus 로고    scopus 로고
    • Phosphorylation of proteins in the light-dependent signalling pathway of a filamentous cyanobacterium
    • Hübschmann, T., Jorissen, H.J.M.M., Börner, T., Gärtner, W. & Tandeau de Marsac, N. (2001) Phosphorylation of proteins in the light-dependent signalling pathway of a filamentous cyanobacterium. Eur. J. Biochem. 268, 3383-3389.
    • (2001) Eur. J. Biochem. , vol.268 , pp. 3383-3389
    • Hübschmann, T.1    Jorissen, H.J.M.M.2    Börner, T.3    Gärtner, W.4    De Tandeau Marsac, N.5
  • 10
    • 0035856979 scopus 로고    scopus 로고
    • Bacteriophytochromes are photochromic histidine kinases using a biliverdin chromophore
    • Bhoo, S.H., Davis, S.J., Walker, J.M., Karniol, B. & Vierstra, R.D. (2001) Bacteriophytochromes are photochromic histidine kinases using a biliverdin chromophore. Nature 414, 776-779.
    • (2001) Nature , vol.414 , pp. 776-779
    • Bhoo, S.H.1    Davis, S.J.2    Walker, J.M.3    Karniol, B.4    Vierstra, R.D.5
  • 12
    • 0036583227 scopus 로고    scopus 로고
    • Phytochromes with noncovalently bound chromophores: The capability of apophytochromes to direct tetrapyrrole photoisomerization
    • Jorissen, H.J.M.M., Quest, B., Lindner, I., Tandeau de Marsac, N. & Gärtner, W. (2002) Phytochromes with noncovalently bound chromophores: The capability of apophytochromes to direct tetrapyrrole photoisomerization. Photochem. Photobiol. 75, 554-559.
    • (2002) Photochem. Photobiol. , vol.75 , pp. 554-559
    • Jorissen, H.J.M.M.1    Quest, B.2    Lindner, I.3    Tandeau De Marsac, N.4    Gärtner, W.5
  • 13
    • 0141483338 scopus 로고    scopus 로고
    • Biliverdin binds covalently to Agrobacterium phytchrome Agp1 via its ring a vinyl side-chain
    • Lamparter, T., Michael, N., Caspani, O., Miyata, T., Shirai, K. & Inomata, K. (2003) Biliverdin binds covalently to Agrobacterium phytchrome Agp1 via its ring A vinyl side-chain. J. Biol. Chem. 278, 33786-33792.
    • (2003) J. Biol. Chem. , vol.278 , pp. 33786-33792
    • Lamparter, T.1    Michael, N.2    Caspani, O.3    Miyata, T.4    Shirai, K.5    Inomata, K.6
  • 14
    • 0037015009 scopus 로고    scopus 로고
    • Phytochrome from Agrobacterium tumefaciens has unusual spectral properties and reveals an N-terminal chromophore attachment site
    • Lamparter, T., Michael, N., Mittmann, F. & Esteban, B. (2002) Phytochrome from Agrobacterium tumefaciens has unusual spectral properties and reveals an N-terminal chromophore attachment site. Proc. Natl Acad. Sci. USA 99, 11628-11633.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 11628-11633
    • Lamparter, T.1    Michael, N.2    Mittmann, F.3    Esteban, B.4
  • 18
    • 0027759656 scopus 로고
    • Mutational analysis of the pea phytochrome A chromophore pocket: Chromophore assembly with apophytochrome A and photoreversibility
    • Deforce, L., Furuya, M. & Song, P.-S. (1993) Mutational analysis of the pea phytochrome A chromophore pocket: chromophore assembly with apophytochrome A and photoreversibility. Biochemistry 32, 14165-14172.
    • (1993) Biochemistry , vol.32 , pp. 14165-14172
    • Deforce, L.1    Furuya, M.2    Song, P.-S.3
  • 19
    • 0034619430 scopus 로고    scopus 로고
    • Defining the bilin lyase domain: Lessons from the extended phytochrome superfamily
    • Wu, S.-H. & Lagarias, J.C. (2000) Defining the bilin lyase domain: lessons from the extended phytochrome superfamily. Biochemistry 39, 13487-13495.
    • (2000) Biochemistry , vol.39 , pp. 13487-13495
    • Wu, S.-H.1    Lagarias, J.C.2
  • 21
    • 0034665225 scopus 로고    scopus 로고
    • Model studies of phytochrome photochromism: Protein-mediated photoisomerization of a linear tetrapyrrole in the absence of covalent binding
    • Lindner, I., Braslavsky, S.E., Schaffner, K. & Gärtner, W. (2000) Model studies of phytochrome photochromism: Protein-mediated photoisomerization of a linear tetrapyrrole in the absence of covalent binding. Angew. Chem. Int. Ed. Engl., 39, 3269-3271.
    • (2000) Angew. Chem. Int. Ed. Engl. , vol.39 , pp. 3269-3271
    • Lindner, I.1    Braslavsky, S.E.2    Schaffner, K.3    Gärtner, W.4
  • 22
    • 0035725360 scopus 로고    scopus 로고
    • Phytochrome Cph1 from the cyanobacterium Synechocystis PCC6803. Purification, assembly, and quaternary structure
    • Lamparter, T., Esteban, B. & Hughes, J. (2001) Phytochrome Cph1 from the cyanobacterium Synechocystis PCC6803. Purification, assembly, and quaternary structure. Eur. J. Biochem. 268, 4720-4730.
    • (2001) Eur. J. Biochem. , vol.268 , pp. 4720-4730
    • Lamparter, T.1    Esteban, B.2    Hughes, J.3
  • 23
    • 0033601199 scopus 로고    scopus 로고
    • Bacteriophytochromes: Phytochrome-like photoreceptors from nonphotosynthetic eubacteria
    • Davis, S.J., Vener, A.V. & Vierstra, R.D. (1999) Bacteriophytochromes: Phytochrome-like photoreceptors from nonphotosynthetic eubacteria. Science 286, 2517-2520.
    • (1999) Science , vol.286 , pp. 2517-2520
    • Davis, S.J.1    Vener, A.V.2    Vierstra, R.D.3
  • 25
    • 0018497476 scopus 로고
    • Studies on plant bile pigments, VII, preparation and characterization of phycobiliproteins with chromophores chemically modified by reduction
    • Kufer, W. & Scheer, H. (1979) Studies on plant bile pigments, VII, preparation and characterization of phycobiliproteins with chromophores chemically modified by reduction. Hoppe-Seyler's Z. Physiol. Chem. 360, 935-956.
    • (1979) Hoppe-Seyler's Z. Physiol. Chem. , vol.360 , pp. 935-956
    • Kufer, W.1    Scheer, H.2
  • 30
    • 0034881136 scopus 로고    scopus 로고
    • Folding pathway for partially folded rabbit muscle creatine kinase
    • Park, Y.D., Ou, W.B., Yu, T.W. & Zhou, H.M. (2001) Folding pathway for partially folded rabbit muscle creatine kinase. Biochem. Cell Biol. 79, 479-487.
    • (2001) Biochem. Cell Biol. , vol.79 , pp. 479-487
    • Park, Y.D.1    Ou, W.B.2    Yu, T.W.3    Zhou, H.M.4
  • 31
    • 0033619706 scopus 로고    scopus 로고
    • Essential thiol requirement to restore pterin- or substrate-binding capability and to regenerate native enzyme-type high-spin heme spectra in the Escherichia coli-expressed tetrahydrobiopterin-free oxygenase domain of neuronal nitric oxide synthase
    • Sono, M., Ledbetter, A.P., McMillan, K., Roman, L.J., Shea, T.M., Maasters, B.S. & Dawson, J.H. (1999) Essential thiol requirement to restore pterin-or substrate-binding capability and to regenerate native enzyme-type high-spin heme spectra in the Escherichia coli-expressed tetrahydrobiopterin- free oxygenase domain of neuronal nitric oxide synthase. Biochemistry 38, 15853-15862.
    • (1999) Biochemistry , vol.38 , pp. 15853-15862
    • Sono, M.1    Ledbetter, A.P.2    McMillan, K.3    Roman, L.J.4    Shea, T.M.5    Maasters, B.S.6    Dawson, J.H.7
  • 32
    • 0000393126 scopus 로고
    • Solution conformations, photophysics, and photochemistry of bile pigments: Bilirubin and biliverdin dimethylesters and related linear tetrapyrroles
    • Braslavsky, S.E., Holzwarth, A.R. & Schaffner, K. (1983) Solution conformations, photophysics, and photochemistry of bile pigments: Bilirubin and biliverdin dimethylesters and related linear tetrapyrroles. Angew. Chem. Int. Eds Engl., 22, 656-674.
    • (1983) Angew. Chem. Int. Eds. Engl. , vol.22 , pp. 656-674
    • Braslavsky, S.E.1    Holzwarth, A.R.2    Schaffner, K.3
  • 35
    • 0026649545 scopus 로고
    • Phytochrome assembly
    • Li, L. & Lagarias, J.C. (1992) Phytochrome assembly. J. Biol. Chem. 267, 19204-19210.
    • (1992) J. Biol. Chem. , vol.267 , pp. 19204-19210
    • Li, L.1    Lagarias, J.C.2
  • 36
    • 0029038122 scopus 로고
    • Continuous fluorescence assay of phytochrome assembly in vitro
    • Li, L., Murphy, J.T. & Lagarias, J.C. (1995) Continuous fluorescence assay of phytochrome assembly in vitro. Biochemistry 34, 7923-7930.
    • (1995) Biochemistry , vol.34 , pp. 7923-7930
    • Li, L.1    Murphy, J.T.2    Lagarias, J.C.3
  • 37
    • 0026781216 scopus 로고
    • Equilibrium and kinetic constants for the thiol disulphide interchange reaction between glutathione and dithiothreitol
    • Rothwarf, D.M. & Scheraga, H.A. (1992) Equilibrium and kinetic constants for the thiol disulphide interchange reaction between glutathione and dithiothreitol. Proc. Natl Acad. Sci. USA 89, 7944-7948.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 7944-7948
    • Rothwarf, D.M.1    Scheraga, H.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.