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Volumn 166, Issue 2, 2004, Pages 1115-1131

The Effect of Selection on Genealogies

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; GENE FREQUENCY; GENE LOCUS; GENE MUTATION; GENEALOGY; GENETIC ANALYSIS; GENETIC SELECTION; GENETIC VARIABILITY; GENOTYPE; NONHUMAN; POPULATION SIZE; PRIORITY JOURNAL; SIMULATION;

EID: 1642286464     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: 10.1534/genetics.166.2.1115     Document Type: Article
Times cited : (68)

References (38)
  • 1
    • 0031673084 scopus 로고    scopus 로고
    • The effect of hitch-hiking on neutral genealogies
    • BARTON, N. H., 1998 The effect of hitch-hiking on neutral genealogies. Genet. Res. 72: 123-133.
    • (1998) Genet. Res. , vol.72 , pp. 123-133
    • Barton, N.H.1
  • 2
    • 0036245513 scopus 로고    scopus 로고
    • Extending the coalescent to multilocus systems: The case of balancing selection
    • BARTON, N. H., and A. NAVARRO, 2002 Extending the coalescent to multilocus systems: the case of balancing selection. Genet. Res. 79: 129-139.
    • (2002) Genet. Res. , vol.79 , pp. 129-139
    • Barton, N.H.1    Navarro, A.2
  • 3
    • 85030920893 scopus 로고    scopus 로고
    • The distribution of coalescence times in a fluctuating population
    • in press
    • BARTON, N. H., A. M. ETHERIDGE and A. K. STURM, 2003 The distribution of coalescence times in a fluctuating population. Ann. Appl. Probab. (in press).
    • (2003) Ann. Appl. Probab.
    • Barton, N.H.1    Etheridge, A.M.2    Sturm, A.K.3
  • 4
    • 0027305597 scopus 로고
    • The effect of deleterious mutations on neutral molecular variation
    • CHARLESWORTH, B., M. T. MORGAN and D. CHARLESWORTH, 1993 The effect of deleterious mutations on neutral molecular variation. Genetics 134: 1289-1303.
    • (1993) Genetics , vol.134 , pp. 1289-1303
    • Charlesworth, B.1    Morgan, M.T.2    Charlesworth, D.3
  • 5
    • 0024583317 scopus 로고
    • A numerical method for calculating moments of coalescent times in finite populations with selection
    • DARDEN, T., N. L. KAPLAN and R. R. HUDSON, 1989 A numerical method for calculating moments of coalescent times in finite populations with selection. J. Math. Biol. 27: 355-368.
    • (1989) J. Math. Biol. , vol.27 , pp. 355-368
    • Darden, T.1    Kaplan, N.L.2    Hudson, R.R.3
  • 6
    • 0033274920 scopus 로고    scopus 로고
    • Genealogical processes for Fleming-Viot models with selection and recombination
    • DONNELLY, P. J., and T. G. KURTZ, 1999a Genealogical processes for Fleming-Viot models with selection and recombination. Ann. Appl. Probab. 9: 1091-1148.
    • (1999) Ann. Appl. Probab. , vol.9 , pp. 1091-1148
    • Donnelly, P.J.1    Kurtz, T.G.2
  • 7
    • 0033243134 scopus 로고    scopus 로고
    • Particle representations for measure-valued population models
    • DONNELLY, P. J., and T. G. KURTZ, 1999b Particle representations for measure-valued population models. Ann. Probab. 27: 166-205.
    • (1999) Ann. Probab. , vol.27 , pp. 166-205
    • Donnelly, P.J.1    Kurtz, T.G.2
  • 8
    • 0034754512 scopus 로고    scopus 로고
    • Likelihoods and simulation methods for a class of non-neutral population genetics models
    • DONNELLY, P. J., M. NORDBORG and P. JOYCE, 2001 Likelihoods and simulation methods for a class of non-neutral population genetics models. Genetics 159: 853-867.
    • (2001) Genetics , vol.159 , pp. 853-867
    • Donnelly, P.J.1    Nordborg, M.2    Joyce, P.3
  • 9
    • 0034898704 scopus 로고    scopus 로고
    • Perfect simulation from population genetic models with selection
    • FEARNHEAD, P., 2001 Perfect simulation from population genetic models with selection. Theor. Popul. Biol. 59: 263-281.
    • (2001) Theor. Popul. Biol. , vol.59 , pp. 263-281
    • Fearnhead, P.1
  • 10
    • 0000427008 scopus 로고    scopus 로고
    • The effect of purifying selection on genealogies
    • (IMA Volumes in Mathematics and Its Applications), edited by P. Donnelly and S. Tavare. Springer-Verlag, New York
    • GOLDING, G. B., 1997 The effect of purifying selection on genealogies, pp. 271-285 in Progress in Population Genetics and Human Evolution (IMA Volumes in Mathematics and Its Applications, Vol. 87), edited by P. DONNELLY AND S. TAVARE. Springer-Verlag, New York.
    • (1997) Progress in Population Genetics and Human Evolution , vol.87 , pp. 271-285
    • Golding, G.B.1
  • 11
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • HILL, W. G., and A. ROBERTSON, 1966 The effect of linkage on limits to artificial selection. Genet. Res. 8: 269-294.
    • (1966) Genet. Res. , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 12
    • 0001935493 scopus 로고
    • Gene genealogies and the coalescent process
    • HUDSON, R., 1990 Gene genealogies and the coalescent process. Oxf. Surv. Evol. Biol. 7: 1-44.
    • (1990) Oxf. Surv. Evol. Biol. , vol.7 , pp. 1-44
    • Hudson, R.1
  • 13
    • 0023760376 scopus 로고
    • The coalescent process in models with selection and recombination
    • HUDSON, R. B., and N. L. KAPLAN, 1988 The coalescent process in models with selection and recombination. Genetics 120: 831-840.
    • (1988) Genetics , vol.120 , pp. 831-840
    • Hudson, R.B.1    Kaplan, N.L.2
  • 14
    • 0028846610 scopus 로고
    • Deleterious background selection with recombination
    • HUDSON, R. R., and N. L. KAPLAN, 1995 Deleterious background selection with recombination. Genetics 141: 1605-1617.
    • (1995) Genetics , vol.141 , pp. 1605-1617
    • Hudson, R.R.1    Kaplan, N.L.2
  • 16
    • 0023815589 scopus 로고
    • The coalescent process in models with selection
    • KAPLAN, N. L., T. DARDEN and R. B. HUDSON, 1988 The coalescent process in models with selection. Genetics 120: 819-829.
    • (1988) Genetics , vol.120 , pp. 819-829
    • Kaplan, N.L.1    Darden, T.2    Hudson, R.B.3
  • 17
    • 0024372736 scopus 로고
    • The hitch-hiking effect revisited
    • KAPLAN, N. L., R. R. HUDSON and C. H. LANGLEY, 1989 The hitch-hiking effect revisited. Genetics 123: 887-899.
    • (1989) Genetics , vol.123 , pp. 887-899
    • Kaplan, N.L.1    Hudson, R.R.2    Langley, C.H.3
  • 19
    • 0030877679 scopus 로고    scopus 로고
    • Ancestral processes with selection
    • KRONE, S. M., and C. NEUHAUSER, 1997 Ancestral processes with selection. Theor. Popul. Biol. 51: 210-237.
    • (1997) Theor. Popul. Biol. , vol.51 , pp. 210-237
    • Krone, S.M.1    Neuhauser, C.2
  • 20
    • 0034099647 scopus 로고    scopus 로고
    • The effects of Hill-Robertson interference between weakly selected sites on patterns of molecular evolution and variation
    • MCVEAN, G. A. T., and B. CHARLESWORTH, 2000 The effects of Hill-Robertson interference between weakly selected sites on patterns of molecular evolution and variation. Genetics 155: 929-944.
    • (2000) Genetics , vol.155 , pp. 929-944
    • Mcvean, G.A.T.1    Charlesworth, B.2
  • 21
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favourable gene
    • MAYNARD SMITH, J., and J. HAIGH, 1974 The hitch-hiking effect of a favourable gene. Genet. Res. 23: 23-35.
    • (1974) Genet. Res. , vol.23 , pp. 23-35
    • Maynard Smith, J.1    Haigh, J.2
  • 22
    • 0024474258 scopus 로고
    • Gustave Malécot and the transition from classical to modern population genetics
    • NAGYLAKI, T., 1989 Gustave Malécot and the transition from classical to modern population genetics. Genetics 122: 253-268.
    • (1989) Genetics , vol.122 , pp. 253-268
    • Nagylaki, T.1
  • 23
    • 0033213362 scopus 로고    scopus 로고
    • The ancestral graph and gene genealogy under frequency-dependent selection
    • NEUHAUSER, C., 1999 The ancestral graph and gene genealogy under frequency-dependent selection. Theor. Popul. Biol. 56: 203-214.
    • (1999) Theor. Popul. Biol. , vol.56 , pp. 203-214
    • Neuhauser, C.1
  • 24
    • 0031014102 scopus 로고    scopus 로고
    • The genealogy of samples in models with selection
    • NEUHAUSER, C., and S. M. KRONE, 1997 The genealogy of samples in models with selection. Genetics 145: 519-534.
    • (1997) Genetics , vol.145 , pp. 519-534
    • Neuhauser, C.1    Krone, S.M.2
  • 25
    • 0014830535 scopus 로고
    • Selection and covariance
    • PRICE, G. R., 1970 Selection and covariance. Nature 227: 520-521.
    • (1970) Nature , vol.227 , pp. 520-521
    • Price, G.R.1
  • 27
    • 84973968271 scopus 로고
    • A mathematical model of the culling process in dairy cattle
    • ROBERTSON, A., 1966 A mathematical model of the culling process in dairy cattle. Anim. Prod. 8: 95-108.
    • (1966) Anim. Prod. , vol.8 , pp. 95-108
    • Robertson, A.1
  • 28
    • 38249033522 scopus 로고
    • Speciation and the "shifting balance" in a continuous population
    • ROUHANI, S., and N. H. BARTON, 1987 Speciation and the "shifting balance" in a continuous population. Theor. Popul. Biol. 31: 465-492.
    • (1987) Theor. Popul. Biol. , vol.31 , pp. 465-492
    • Rouhani, S.1    Barton, N.H.2
  • 29
    • 0028795894 scopus 로고
    • Effective size of populations under selection
    • SANTIAGO, E., and A. CABALLERO, 1995 Effective size of populations under selection. Genetics 139: 1013-1030.
    • (1995) Genetics , vol.139 , pp. 1013-1030
    • Santiago, E.1    Caballero, A.2
  • 31
    • 0034122955 scopus 로고    scopus 로고
    • Simulation of selected genealogies
    • SLADE, P. F., 2000a Simulation of selected genealogies. Theor. Popul. Biol. 57: 35-50.
    • (2000) Theor. Popul. Biol. , vol.57 , pp. 35-50
    • Slade, P.F.1
  • 32
    • 0034494235 scopus 로고    scopus 로고
    • Most recent common ancestor probability distributions in gene genealogies under selection
    • SLADE, P. F., 2000b Most recent common ancestor probability distributions in gene genealogies under selection. Theor. Popul. Biol. 58: 291-305.
    • (2000) Theor. Popul. Biol. , vol.58 , pp. 291-305
    • Slade, P.F.1
  • 33
    • 0035227780 scopus 로고    scopus 로고
    • Simulation of 'hitch-hiking' genealogies
    • SLADE, P. F., 2001 Simulation of 'hitch-hiking' genealogies. J. Math. Biol. 42: 41-70.
    • (2001) J. Math. Biol. , vol.42 , pp. 41-70
    • Slade, P.F.1
  • 34
    • 0029871684 scopus 로고    scopus 로고
    • Gene genealogies within mutant allelic classes
    • SLATKIN, M., 1996 Gene genealogies within mutant allelic classes. Genetics 142: 579-587.
    • (1996) Genetics , vol.142 , pp. 579-587
    • Slatkin, M.1
  • 35
    • 0034884532 scopus 로고    scopus 로고
    • Simulating genealogies of selected alleles in a population of variable size
    • SLATKIN, M., 2001 Simulating genealogies of selected alleles in a population of variable size. Genet. Res. 78: 49-58.
    • (2001) Genet. Res. , vol.78 , pp. 49-58
    • Slatkin, M.1
  • 36
    • 0035714381 scopus 로고    scopus 로고
    • The coalescent in an island model of population subdivision with variation among demes
    • WAKELEY, J., 2001 The coalescent in an island model of population subdivision with variation among demes. Theor. Popul. Biol. 59: 133-144.
    • (2001) Theor. Popul. Biol. , vol.59 , pp. 133-144
    • Wakeley, J.1
  • 37
    • 0036667699 scopus 로고    scopus 로고
    • The genealogy of a sequence subject to purifying selection at multiple sites
    • WILLIAMSON, S. M., and M. E. ORIVE, 2002 The genealogy of a sequence subject to purifying selection at multiple sites. Mol. Biol. Evol. 19: 1376-1384.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1376-1384
    • Williamson, S.M.1    Orive, M.E.2
  • 38
    • 0004149831 scopus 로고    scopus 로고
    • Wolfram Media/Cambridge University Press, Cambridge, UK
    • WOLFRAM, S., 1996 The Mathematica Book. Wolfram Media/Cambridge University Press, Cambridge, UK.
    • (1996) The Mathematica Book
    • Wolfram, S.1


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