On Selectivity and Sensitivity of Synthetic Multifunctional Pores as Enzyme Sensors: Discrimination between ATP and ADP and Comparison with Biological Pores

Biopolymers - Peptide Science Section

Volumn 76, Issue 1, 2004, Pages 55-65

  Sardé, Nathalie ^a   Matile, Stefan ^a  

^a UNIVERSITY OF GENEVA   (Switzerland)

Author keywords

barrels; ATP; Bioorganic chemistry; Enzymes; Glycolysis; Ion channels; Molecular recognition; Polypeptides; Pores; Sensors

Indexed keywords

ADENOSINETRIPHOSPHATE; BIOASSAY; BIOSENSORS; BIOSYNTHESIS; ISOMERIZATION; PHOSPHATES;

AGGREGATION NUMBER; BIOLOGICAL PORES;

BIOPOLYMERS;

6 PHOSPHOFRUCTOKINASE; ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATE; FRUCTOSE 6 PHOSPHATE; GLUCOSE 6 PHOSPHATE; GLUCOSE 6 PHOSPHATE ISOMERASE; GLYCOLYTIC ENZYME; HEXOKINASE; ION CHANNEL; MELITTIN; PAPAIN; POLYGLUTAMIC ACID;

BETA SHEET; CHEMICAL REACTION; CONCENTRATION RESPONSE; CONFERENCE PAPER; ELECTRIC POTENTIAL; ENZYME ACTIVITY; ENZYME ASSAY; ENZYMIC BIOSENSOR; GLYCOLYSIS; HYDROLYSIS; ISOMERIZATION; MOLECULAR RECOGNITION; NONHUMAN; POROSITY; PROTEIN ASSEMBLY; PROTEIN PROTEIN INTERACTION; SENSITIVITY AND SPECIFICITY; SUPRAMOLECULAR CHEMISTRY; SYNTHETIC MULTIFUNCTIONAL PORE;

ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATE; AMINO ACID SEQUENCE; BIOPOLYMERS; BIOSENSING TECHNIQUES; ENZYMES; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; SENSITIVITY AND SPECIFICITY; SUBSTRATE SPECIFICITY;

EID: 1542406436     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/bip.10573     Document Type: Conference Paper

References (40)

1. Sakai, N.; Matile, S. Chem Commun, 2003, 2514-2523.
2. Baudry, Y.; Baumeister, B.; Das, G.; Gerard, D.; Matile, S.; Sakai, N.; Som, A.; Sordé N.; Talukdar P. Chimia 2002, 56, 667-671.
3. Matile, S. Chem Soc Rev 2001, 30, 158-167.
4. Baumeister, B.; Das, G.; Sakai N.; Matile S. Chimia 2001, 55, 302-305.
5. Matile, S. Chem Rec 2001, 1, 162-172.
6. Sakai N.; Matile, S. Chem Eur J 2000, 6, 1731-1737.
7. Sakai, N.; Majumdar N.; Matile, S. J Am Chem Soc 1999, 121, 4294-4295.
8. Baumeister, B.; Sakai N.; Matile, S. Angew Chem Int Ed 2000, 39, 1955-1958.
9. Sakai, N.; Baumeister B.; Matile, S. ChemBioChem 2000, 1, 123-125.
10. Sakai N.; Matile, S. J Am Chem Soc 2002, 124, 1184-1185.
11. Sakai, N.; Houdebert D.; Matile, S. Chem Eur J 2003, 9, 223-232.
12. Baumeister, B.; Som, A.; Das, G.; Sakai, N.; Vilbois, F.; Gerard, D.; Shahi, S. P.; Matile, S. Helv Chim Acta 2002, 85, 2740-2753.
13. Som, A.; Sakai N.; Matile, S. Bioorg Med Chem 2003, 11, 1363-1369.
14. Das, G.; Ouali, L.; Adrian, M.; Baumeister, B.; Wilkinson, K. J.; Matile, S. Angew Chem Int Ed 2001, 40, 4657-4661.
15. Baumeister, B.; Sakai, N.; Matile, S. Org Lett 2001, 3, 4229-4232.
16. Som A.; Matile, S. Eur J Org Chem 2002, 3874-3883.
17. Baumeister, B.; Matile, S. Macromolecules 2002, 35, 1549-1555.
18. Sakai, N.; Sordé, N.; Matile, S. J Am Chem Soc 2003, 125, 7776-7777.
19. Sakai, N.; Sordé, N.; Das, G.; Perrottet, P.; Gerard, D.; Matile, S. Org Biomol Chem 2003, 1, 1226-1231.
20. Sordé, N.; Matile, S. J Supramol Chem, 2002, 2, 191-199.
21. Talukdar, P.; Sakai, N.; Sordé, N.; Gerard, D.; Cardona, V. M. F. ; Matile, S. Bioorg Med Chem, in press.
22. Das, G.; Talukdar, P.; Matile, S. Science 2002, 298, 1600-1602.
23. Sordé, N.; Das, G.; Matile, S. Proc Natl Acad Sci USA, 2003, 100, 11964-11969.
24. Das, G.; Matile, S. Proc Natl Acad Sci USA 2002, 99, 5183-5188.
25. Das, G.; Onouchi, H.; Yashima, E.; Sakai, N.; Matile, S. ChemBioChem 2002, 3, 1089-1096.
26. Scrimin, P.; Tecilla, P. Curr Opin Chem Biol 1999, 3, 730-735.
27. Gokel, G. W.; Mukhopadhyay, A. Chem Soc Rev 2001, 30, 274-286.
28. Kirkovits, G. J.; Hall, C. D. Adv Supramol Chem 2000, 7, 1-47.
29. Bayley, H.; Cremer, P. S. Nature 2001, 413, 226-230.
30. Wahler, D.; Reymond, J.-L. Curr Opin Chem Biol 2001, 5, 152-158.
31. Czarnik, A. W. Acc Chem Res 1994, 27, 302-308.
32. Boiteux, A.; Hess, B. Phil Trans R Soc Lond B 1981, 293, 5-22, and other articles in this special issue.
33. Fothergill-Gilmore, L. A. Trends Biochem Res 1986, 11, 47-51.
34. Termonia, Y.; Ross, J. Proc Natl Acad Sci USA 1981, 78, 2952-2956.
35. Kuser, P. R.; Krauchenco, S.; Atunes, O. A. C.; Polikarpov, I. J Biol Chem 2000, 275, 20814-20821.
36. Lahiri, S. D.; Zhang, G.; Dunaway-Mariano, D.; Allen, K. N. Science 2003, 299, 2067-2071.
37. Miller, W. G. J Am Chem Soc 1961, 83, 259-265.
38. Neumann, H.; Sharon, N.; Katchalski, E. Nature 1962, 195, 1102.
39. Takeda, K.; Moriyama, Y. J Am Chem Soc 1991, 113, 1040-1041.
40. Dawson, R. M. C.; Elliott, D. C.; Elliot, W. H.; Jones, K. M. Data for Biochemical Research, 2nd ed.; Oxford University Press: Oxford, UK, 1969; pp 433-434.