The Yeast Casein Kinase Yck3p is Palmitoylated, then Sorted to the Valcuolar Membrane with AP-3-dependent Recognition of a YXXΦ Adaptin Sorting Signal

Molecular Biology of the Cell

Volumn 15, Issue 3, 2004, Pages 1397-1406

  Sun, Beimeng ^a   Chen, Linyi ^a,b   Cao, Wei ^a   Roth, Amy F ^a   Davis, Nicholas G ^a  

^a WAYNE STATE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTIN; CASEIN KINASE; CASEIN KINASE YCK3P; TRANSCRIPTION FACTOR AP 1; TRANSCRIPTION FACTOR AP 2; TRANSCRIPTION FACTOR AP 3; UNCLASSIFIED DRUG;

ARTICLE; CARBOXY TERMINAL SEQUENCE; CELL COMPARTMENTALIZATION; COATED PIT; COATED VESICLE; COMPLEX FORMATION; ENDOCYTOSIS; ENDOSOME; ENZYME LOCALIZATION; GENE DELETION; GENE DISRUPTION; GENE MUTATION; MAMMAL CELL; MOLECULAR RECOGNITION; NONHUMAN; PALMITOYLATION; PRIORITY JOURNAL; TONOPLAST; YEAST;

CASEIN KINASE I; CASEIN KINASES; CYSTEINE; FUNGAL PROTEINS; MUTATION; PROTEIN KINASES; PROTEIN STRUCTURE, TERTIARY; PROTEIN TRANSPORT; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; VACUOLES;

MAMMALIA;

EID: 1542344019     PISSN: 10591524     EISSN: None     Source Type: Journal    
DOI: 10.1091/mbc.E03-09-0682     Document Type: Article

References (37)

1. Babu, P., Bryan, J.D., Panek, H.R., Jordan, S.L., Forbrich, B.M., Kelley, S.C., Colvin, R.T., and Robinson, L.C. (2002). Plasma membrane localization of the Yck2p yeast casein kinase 1 isoform requires the C-terminal extension and secretory pathway function. J. Cell Sci. 115, 4957-4968.
2. Boehm, M., and Bonifacino, J.S. (2002). Genetic analyses of adaptin function from yeast to mammals. Gene 286, 175-186.
3. Bonifacino, J.S., and Traub, L.M. (2003). Signals for sorting of transmembrane proteins to endosomes and lysosomes. Annu. Rev. Biochem. 72, 395-447.
4. Chen, L., and Davis, N.G. (2002). Ubiquitin-independent entry into the yeast recycling pathway. Traffic 3, 110-123.
5. Conibear, E., and Stevens, T.H. (1998). Multiple sorting pathways between the late Golgi and the vacuole in yeast. Biochim. Biophys. Acta 1404, 211-230.
6. Cowles, C.R., Odorizzi, G., Payne, G.S., and Emr, S.D. (1997a). The AP-3 adaptor complex is essential for cargo-selective transport to the yeast vacuole. Cell 91, 109-118.
7. Cowles, C.R., Snyder, W.B., Burd, C.G., and Emr, S.D. (1997b). Novel Golgi to vacuole delivery pathway in yeast: identification of a sorting determinant and required transport component. EMBO J. 16, 2769-2782.
8. Darsow, T., Burd, C.G., and Emr, S.D. (1998). Acidic di-leucine motif essential for AP-3-dependent sorting and restriction of the functional specificity of the Vam3p vacuolar t-SNARE. J. Cell Biol. 142, 913-922.
9. Darsow, T., Katzmann, D.J., Cowles, C.R., and Emr, S.D. (2001). Vps41p function in the alkaline phosphatase pathway requires homo-oligomerization and interaction with AP-3 through two distinct domains. Mol. Biol. Cell 12, 37-51.
10. Davis, N.G., Horecka, J.L., and Sprague, G.F., Jr. (1993). Cis- and trans-acting functions required for endocytosis of the yeast pheromone receptors. J. Cell Biol. 122, 53-65.
11. Dell'Angelica, E.C., Klumperman, J., Stoorvogel, W., and Bonifacino, J.S. (1998). Association of the AP-3 adaptor complex with clathrin. Science 280, 431-434.
12. D'Hondt, K., Heese-Peck, A., and Riezman, H. (2000). Protein and lipid requirements for endocytosis. Annu. Rev. Genet. 34, 255-295.
13. Huang, K.M., D'Hondt, K., Riezman, H., and Lemmon, S.K. (1999). Clathrin functions in the absence of heterotetrameric adaptors and AP180-related proteins in yeast. EMBO J. 18, 3897-3908.
14. Jiang, Y., and Ferro-Novick, S. (1994). Identification of yeast component A: reconstitution of the geranylgeranyltransferase that modifies Yptlp and Sec4p. Proc. Natl. Acad. Sci. USA 91, 4377-4381.
15. Katzmann, D.J., Odorizzi, G., and Emr, S.D. (2002). Receptor downregulation and multivesicular-body sorting. Nat. Rev. Mol. Cell Biol. 3, 893-905.
16. Lobo, S., Greentree, W.K., Linder, M.E., and Deschenes, R.J. (2002). Identification of a Ras palmitoyltransferase in Saccharomyces cerevisiae. J. Biol. Chem. 277, 41268-41273.
17. Newman, L.S., McKeever, M.O., Okano, H.J., and Darnell, R.B. (1995). Beta-NAP, a cerebellar degeneration antigen, is a neuron-specific vesicle coat protein. Cell 82, 773-783.
18. Odorizzi, G., Babst, M., and Emr, S.D. (1998). Fab1p PtdIns(3)P 5-kinase function essential for protein sorting in the multivesicular body. Cell 95, 847-858.
19. Owen, D.J., and Evans, P.R. (1998). A structural explanation for the recognition of tyrosine-based endocytotic signals. Science 282, 1327-1332.
20. Panek, H.R., Stepp, J.D., Engle, H.M., Marks, K.M., Tan, P.K., Lemmon, S.K., and Robinson, L.C. (1997). Suppressors of YCK-encoded yeast casein kinase 1 deficiency define the four subunits of a novel clathrin AP-like complex. EMBO J. 16, 4194-4204.
21. Piper, R.C., Bryant, N.J., and Stevens, T.H. (1997). The membrane protein alkaline phosphatase is delivered to the vacuole by a route that is distinct from the VPS-dependent pathway. J. Cell Biol. 138, 531-545.
22. Piper, R.C., Cooper, A.A., Yang, H., and Stevens, T.H. (1995). VPS27 controls vacuolar and endocytic traffic through a prevacuolar compartment in Saccharomyces cerevisiae. J. Cell Biol. 131, 603-617.
23. Roberts, C.J., Nothwehr, S.F., and Stevens, T.H. (1992). Membrane protein sorting in the yeast secretory pathway: evidence that the vacuole may be the default compartment. J. Cell Biol. 119, 69-83.
24. Robinson, L.C., Menold, M.M., Garrett, S., and Culbertson, M.R. (1993). Casein kinase I-like protein kinases encoded by YCK1 and YCK2 are required for yeast morphogenesis. Mol. Cell Biol. 13, 2870-2881.
25. Roth, A.F., Feng, Y., Chen, L., and Davis, N.G. (2002). The yeast DHHC cysteine-rich domain protein Akr1p is a palmitoyl transferase. J. Cell Biol. 159, 23-28.
26. Seeley, E.S., Kato, M., Margolis, N., Wickner, W., and Eitzen, G. (2002). Genomic analysis of homotypic vacuole fusion. Mol. Biol. Cell 13, 782-794.
27. Sikorski, R.S., and Hieter, P. (1989). A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27.
28. Simpson, F., Peden, A.A., Christopoulou, L., and Robinson, M.S. (1997). Characterization of the adaptor-related protein complex, AP-3. J. Cell Biol. 137, 835-845.
29. Stepp, J.D., Huang, K., and Lemmon, S.K. (1997). The yeast adaptor protein complex, AP-3, is essential for the efficient delivery of alkaline phosphatase by the alternate pathway to the vacuole. J. Cell Biol. 139, 1761-1774.
30. Stepp, J.D., Pellicena-Palle, A., Hamilton, S., Kirchhausen, T., and Lemmon, S.K. (1995). A late Golgi sorting function for Saccharomyces cerevisiae Apmlp, but not for Apm2p, a second yeast clathrin AP medium chain-related protein. Mol. Biol. Cell 6, 41-58.
31. Valdivia, R.H., Baggott, D., Chuang, J.S., and Schekman, R.W. (2002). The yeast clathrin adaptor protein complex 1 is required for the efficient retention of a subset of late Golgi membrane proteins. Dev. Cell 2, 283-294.
32. Vancura, A., Sessler, A., Leichus, B., and Kuret, J. (1994). A prenylation motif is required for plasma membrane localization and biochemical function of casein kinase I in budding yeast. J. Biol. Chem. 269, 19271-19278.
33. Vowels, J.J., and Payne, G.S. (1998). A dileucine-like sorting signal directs transport into an AP-3-dependent, clathrin-independent pathway to the yeast vacuole. EMBO J. 17, 2482-2493.
34. Wang, X., Hoekstra, M.F., DeMaggio, A.J., Dhillon, N., Vancura, A., Kuret, J., Johnston, G.C., and Singer, R.A. (1996). Prenylated isoforms of yeast casein kinase I, including the novel Yck3p, suppress the gcs1 blockage of cell proliferation from stationary phase. Mol. Cell Biol. 16, 5375-5385.
35. Wickner, W. (2002). Yeast vacuoles and membrane fusion pathways. EMBO J. 21, 1241-1247.
36. Yeung, B.G., Phan, H.L., and Payne, G.S. (1999). Adaptor complex-independent clathrin function in yeast. Mol. Biol. Cell 10, 3643-3659.
37. Zhang, F.L., and Casey, P.J. (1996). Protein prenylation: molecular mechanisms and functional consequences. Annu. Rev. Biochem. 65, 241-269.